GBrowse Details

Vigan.04G211200.01

Basic Information:
Name: Vigan.04G211200.01
Multiple alignment
Variant Information
Position: Chr04:30625094..30630357 (- strand)
Length: 5264
Functional Information:
Description: Similar to monodehydroascorbate reductase, cytoplasmic isoform 2. [XP_003553831.1, Glycine max]
GO: Biological Process: cell redox homeostasis (GO:0045454)
Biological Process: oxidation-reduction process (GO:0055114)
Molecular Function: oxidoreductase activity (GO:0016491)
Molecular Function: flavin adenine dinucleotide binding (GO:0050660)
InterPro: Pyridine nucleotide-disulphide oxidoreductase, NAD-binding domain (IPR001327)
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain (IPR004099)
FAD-dependent pyridine nucleotide-disulphide oxidoreductase (IPR013027)
FAD/NAD-linked reductase, dimerisation domain (IPR016156)
Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain (IPR023753)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:31.95,29.08,15.12,65.66,6.36,8.70,7.37,9.46
Arabidopsis thaliana homolog: AT3G27820.1
Automatic updates:
Name: NM_001422410 NCBI(nuccore)
Organism: Medicago truncatula
Description: Medicago truncatula monodehydroascorbate reductase 4, peroxisomal (LOC25498021), mRNA.
PubMed ID: 31837401 NCBI(pubmed)
23136381 NCBI(pubmed)
20209049 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr04:30625094..30625433 (- strand)
Length: 340
Type: three_prime_UTR
Position: Chr04:30625434..30626159 (- strand)
Length: 726
Type: CDS
Position: Chr04:30626684..30626802 (- strand)
Length: 119
Type: CDS
Position: Chr04:30626961..30627180 (- strand)
Length: 220
Type: CDS
Position: Chr04:30627550..30627668 (- strand)
Length: 119
Type: CDS
Position: Chr04:30628480..30628560 (- strand)
Length: 81
Type: CDS
Position: Chr04:30629532..30629583 (- strand)
Length: 52
Type: CDS
Position: Chr04:30629912..30630031 (- strand)
Length: 120
Type: CDS
Position: Chr04:30630032..30630357 (- strand)
Length: 326
Type: five_prime_UTR


>Vigan.04G211200.01
GGTAAGACAA GATGAATGGC TGTGATGGAT CATATCTCAT TAATCACTTA TATCTTTAAA AATATGCAAT GGATAATTTT
ATTAAAATAT GTGGAAACAA TGGAGTTTTG CAGAGGGTAT GATTTGGGGG TATTAGGGTA AACGCATCAG ATATCTCCGT
CGTGGTTGTG GGTCCCGTTC ATGATCTTCA GATTTTGTGG GAGTGTCTTG GAAGAAAGCG CTCCCAAAAA TTTAAGCACC
CTCGATTTTT AAATTGAAGA TAAATATAAC CGAAGGCGTT TTGTTTTGTT GCCTTGCGTT GCTTTGTGTG GATGTGAAGT
TGGGAAATGG GGAGAGCCTT TGTGTATGTG ATTCTTGGGG GAGGTGTGGC TGCTGGCTAT GCTGCTCTTG AATTCGTCAA
AAAAGGAGTC TCTCATGGTG AACTCTGTAT CATTTCCGAC GAACCGGTTG CTCCTTATGA AAGGCCTGCA TTGAGCAAAG
GATTTTTGCT TCCAGAAGCT GCTGCACGGC TTCCATCCTT TCATACATGT GTTGGTGCAA ATGAGGAGAG GCTAACTCCC
AAATGGTATA AAGAACATGG GATTGAATTA GTTCTTGGAA CCGGAGTTAA ATCTGCTGAT GTGAAACGCA AGACACTTTT
AACAACAACA GGAGAGACCA TAAGTTATAA GTTTCTTATT GTTGCTACTG GTGCACGGGC TCTGAAGCTG GAAGAATTTG
GGGTGAGTGG ATCAGATGCA GAAAATGTCT GTTATTTAAG AGATATAGCA GATGCAAATA GGCTTGTCAA TGTTATACAA
TCTTGTCCAG AAGGGAATGC TGTTGTCATT GGTGGTGGAT ACATAGGCAT GGAGTGTGCA GCATCTCTAG TGATCAATAA
AATAAATGTG ACAATGGTTT TCCCTGAGGA ACATTGCATG GCTCGTTTAT TCACCACAAA AATAGCAAAC TACTACGAAG
AATATTATAA ATCAAGGGGA GTAAACTTCG TTAAGGGAAC TGTGCTGTCA TCATTCGATT TTGACTCCAC TGGGAAGGTT
ACAGCTGTTA ATCTTAGAGA CGGAAGCACG CTATCTGTGG ACATGGTTGT GGTGGGAATT GGAATACGTC CAAATACAGG
TCTGTTTGAA GGCCAGCTTA CTTTGGAGAA AGGTGGAATC AAAGTAAATG GGATGTTGCA GTCAAGCAAC AGCTCAGTCT
ATGCCATTGG AGATGTTGCA GCATTTCCAG TCAAAGCATT TGGGGAAACT CGAAGACTTG AGCATGTTGA TTCAGCTCGG
AAGTCTGCAA AACATGTCGT TGCTGCAATA ATGGAACCAG ACAAAACTGG AGAATTTGAC TACATTCCTT TTTTCTACTC
CAGAATCTTC ACATTGTCTT GGCAATTTTA TGGGGATAAT ATTGGGGAAG TTGTATATTT CGGAGATATG TCAGGCAGTG
CATTTGGAGC ATACTGGGTA AGCAAGGGTC AGCTTGTTGG GGCTTTCCTT GAAGGTGGAA ATAAAGAAGA GTATGAAGCT
ATAGCTAAGG TCACTAGGTT AAGGCCAGCA ATTGAAGACT TGACTGAACT GGAGAGACAG GGTTTGAGAT ATGCAGTTAC
AGTTAGCCAG AAACCAGCGG TGTCACCCCC AGTGGAGGTT AGGGCCTCGG ACCTACTTTT GGAAAAACCA TTATATGCTT
GGCATGCTAC AGCTGGGGTT ATTATTGCCG CATCAATAGC TGCATTTGCA TATTTTTATG GAAAAAAACG CCGCAGATGG
TGAAACATTT AAGAAGATTA CCAATTCATG GGCAAGGATG TGAACGGATT TTAGACTGAT CTTCAAGCTG TAACATTGAT
AAGCTTAGGA TTAGGATATT TTGACATGTT ATGTATCCGA TCCAATTTAC TGGATGACCA TTCTTCAGTT CTGTTGTTCA
TACGGTTGTT GTACCAAAAA CAAATCCAAA ATATATAAGT GGGCATCATT AGGAAGATAT TCGCACAGCA GGAGTCCGTA
TATTATCTAA TAGTTTCGTT TTCTCAACAG CTAATCTTGT CATGACCACG ATAATATCGG ATTACTTTTT TTTTTGTTTA
TGTAAAGGTT TCTTCATCCC AAA

>Vigan.04G211200.01
ATGGGGAGAG CCTTTGTGTA TGTGATTCTT GGGGGAGGTG TGGCTGCTGG CTATGCTGCT CTTGAATTCG TCAAAAAAGG
AGTCTCTCAT GGTGAACTCT GTATCATTTC CGACGAACCG GTTGCTCCTT ATGAAAGGCC TGCATTGAGC AAAGGATTTT
TGCTTCCAGA AGCTGCTGCA CGGCTTCCAT CCTTTCATAC ATGTGTTGGT GCAAATGAGG AGAGGCTAAC TCCCAAATGG
TATAAAGAAC ATGGGATTGA ATTAGTTCTT GGAACCGGAG TTAAATCTGC TGATGTGAAA CGCAAGACAC TTTTAACAAC
AACAGGAGAG ACCATAAGTT ATAAGTTTCT TATTGTTGCT ACTGGTGCAC GGGCTCTGAA GCTGGAAGAA TTTGGGGTGA
GTGGATCAGA TGCAGAAAAT GTCTGTTATT TAAGAGATAT AGCAGATGCA AATAGGCTTG TCAATGTTAT ACAATCTTGT
CCAGAAGGGA ATGCTGTTGT CATTGGTGGT GGATACATAG GCATGGAGTG TGCAGCATCT CTAGTGATCA ATAAAATAAA
TGTGACAATG GTTTTCCCTG AGGAACATTG CATGGCTCGT TTATTCACCA CAAAAATAGC AAACTACTAC GAAGAATATT
ATAAATCAAG GGGAGTAAAC TTCGTTAAGG GAACTGTGCT GTCATCATTC GATTTTGACT CCACTGGGAA GGTTACAGCT
GTTAATCTTA GAGACGGAAG CACGCTATCT GTGGACATGG TTGTGGTGGG AATTGGAATA CGTCCAAATA CAGGTCTGTT
TGAAGGCCAG CTTACTTTGG AGAAAGGTGG AATCAAAGTA AATGGGATGT TGCAGTCAAG CAACAGCTCA GTCTATGCCA
TTGGAGATGT TGCAGCATTT CCAGTCAAAG CATTTGGGGA AACTCGAAGA CTTGAGCATG TTGATTCAGC TCGGAAGTCT
GCAAAACATG TCGTTGCTGC AATAATGGAA CCAGACAAAA CTGGAGAATT TGACTACATT CCTTTTTTCT ACTCCAGAAT
CTTCACATTG TCTTGGCAAT TTTATGGGGA TAATATTGGG GAAGTTGTAT ATTTCGGAGA TATGTCAGGC AGTGCATTTG
GAGCATACTG GGTAAGCAAG GGTCAGCTTG TTGGGGCTTT CCTTGAAGGT GGAAATAAAG AAGAGTATGA AGCTATAGCT
AAGGTCACTA GGTTAAGGCC AGCAATTGAA GACTTGACTG AACTGGAGAG ACAGGGTTTG AGATATGCAG TTACAGTTAG
CCAGAAACCA GCGGTGTCAC CCCCAGTGGA GGTTAGGGCC TCGGACCTAC TTTTGGAAAA ACCATTATAT GCTTGGCATG
CTACAGCTGG GGTTATTATT GCCGCATCAA TAGCTGCATT TGCATATTTT TATGGAAAAA AACGCCGCAG ATGGTGA

>Vigan.04G211200.01
MGRAFVYVIL GGGVAAGYAA LEFVKKGVSH GELCIISDEP VAPYERPALS KGFLLPEAAA RLPSFHTCVG ANEERLTPKW
YKEHGIELVL GTGVKSADVK RKTLLTTTGE TISYKFLIVA TGARALKLEE FGVSGSDAEN VCYLRDIADA NRLVNVIQSC
PEGNAVVIGG GYIGMECAAS LVINKINVTM VFPEEHCMAR LFTTKIANYY EEYYKSRGVN FVKGTVLSSF DFDSTGKVTA
VNLRDGSTLS VDMVVVGIGI RPNTGLFEGQ LTLEKGGIKV NGMLQSSNSS VYAIGDVAAF PVKAFGETRR LEHVDSARKS
AKHVVAAIME PDKTGEFDYI PFFYSRIFTL SWQFYGDNIG EVVYFGDMSG SAFGAYWVSK GQLVGAFLEG GNKEEYEAIA
KVTRLRPAIE DLTELERQGL RYAVTVSQKP AVSPPVEVRA SDLLLEKPLY AWHATAGVII AASIAAFAYF YGKKRRRW*