GBrowse Details

Vigan.04G217700.01

Basic Information:
Name: Vigan.04G217700.01
Multiple alignment
Variant Information
Position: Chr04:31913374..31916607 (+ strand)
Length: 3234
Functional Information:
Description: Similar to Uncharacterized protein. [O80412, Glycine max]
InterPro: Mitochondrial substrate/solute carrier (IPR018108)
Mitochondrial carrier domain (IPR023395)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:257.69,161.25,194.30,83.37,192.70,190.38,153.18,104.02
Arabidopsis thaliana homolog: AT5G14040.1
Automatic updates:
Name: NM_001248723 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max phosphate transporter (LOC547633), mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001250375 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max mitochondrial phosphate transporter (LOC548006), mRNA.
PubMed ID: 10437831 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr04:31913374..31913625 (+ strand)
Length: 252
Type: five_prime_UTR
Position: Chr04:31913626..31913940 (+ strand)
Length: 315
Type: CDS
Position: Chr04:31914733..31915094 (+ strand)
Length: 362
Type: CDS
Position: Chr04:31915221..31915264 (+ strand)
Length: 44
Type: CDS
Position: Chr04:31915570..31915784 (+ strand)
Length: 215
Type: CDS
Position: Chr04:31915888..31916012 (+ strand)
Length: 125
Type: CDS
Position: Chr04:31916113..31916185 (+ strand)
Length: 73
Type: CDS
Position: Chr04:31916186..31916607 (+ strand)
Length: 422
Type: three_prime_UTR


>Vigan.04G217700.01
CTCATTTCTA AACTATTACT GTTCCATTTC CCAGAGTGTC AAGACGGTAA TTCACATAGG TTGGTGGGGC CATTCTCTCT
GAACAAAAAC GGCACCACCA ATATAAAGTA GAGAAGCCGA AAACTTGGAA CCAAAAGCAG CAGAGGCATT GGAAAAATAT
AGAGAGAGAT CCTTTCCTTC TCTCTTGCTT TCCTTTGACG CTTCTGACCC TTTTCCCTTC CAAAACGCCT TTCTGTTCTC
TTCTCTGACC TAATGGCTTT CTCCGACTCT TCTTCGGGCC GCAGCTCTCT CATCCCCTCC TTCCTATACT CCTCGTCCTC
CAAGACGCTT CCTCTCCACC GTATGCTCCA CTCCACCGCC GCTGCCGCCG CCGCCCCACC CTCGGCACCG CCGGCAAACC
TCGATTCTGG ATCGCGCGGC TTCATGATTC CCTCTCCCAG CGAGTCACGT AAAATCGAGC TGTACTCTCC CGCCTTCTAC
GCCGCCTGTA CTGCCGGTGG AATCCTCAGC TGTGGCCTCA CTCACATGAC CGTCACTCCT CTTGACCTTG TCAAGTGTAA
TATGCAGATC GACCCTGCTA AGTACAAGAA CATCACATCT GGATTTGGGG TTTTGCTTAA GGAGCAGGGC TTCAGGGGCT
TTTTCCGTGG TTGGGTGCCT ACCTTGCTTG GTTACAGTGC CCAGGGTGCT TGCAAATTCG GATTTTACGA GTTCTTTAAG
AAGTATTACT CTGATATTGC TGGTCCAGAG TATGCTAGCA AGTACAAGAC CTTGATTTAC CTTGCTGGTT CCGCTTCTGC
CGAGGTTATT GCTGATGTTG CTCTTTGCCC CTTCGAGGCT GTGAAGGTCC GTGTCCAAAC ACAGCCTGGT TTTGCTAGGG
GTTTGGCTGA TGGGCTCCCA AAATTTGTGA AATCTGAAGG AACTTTGGGG CTGTACAAGG GAATAGTGCC TCTGTGGGGA
CGACAAATTC CATACACAAT GATGAAGTTT GCTTCGTTTG AGACCATAGT GGAGCTGATC TATAAGCATG CCATTCCTAC
TCCAAAGAAT GAGTGCACCA AAAGCCTGCA ACTCGGTGTC AGTTTTGCTG GTGGATATGT TGCTGGTGTG CTTTGTGCAA
TCGTGTCTCA TCCTGCTGAT AATCTTGTCT CTTTCCTGAA CAATGCTAAA GGAGCAACAG TTGGTGATGC GGTGAGTAAG
CTTGGTTTGT GGGGTCTCTT CACCCGTGGT CTTCCCCTCC GTATTGTGAT GATTGGAACT CTTACTGGTG CCCAATGGGG
AATATATGAT GCTTTCAAAG TCTTTGTTGG GCTGCCAACA ACTGGTGGTC CTGCTCCTGC CGCCGCTCCA GCTCCAGCTC
CTGGTTCTGA CCTAGCAAAG GCGTAAAATG TCCAGTGATG ACCACTCAAT AGTTTGTTTA CGAAAGTTAG AAGGCAGTGA
ATAGGGACCA TAAATAAACA GAGGACTGAA GTTGCTTGGG TGGAACTCAA GCTTCGTTGG ATAAATATTC TTTTCAAGTT
CAGACATTGT TTCCATTTTA TTGTATGAGT ATGTCAAGTT TTTGGGAGGA TGGTTTTGCT CGCATCCTTC CCGTTTTGAG
AACTTTGTAG CTAGGAATGA TATAATTTAT AGCATGTTTG GTTCGCCACA TGCCATTGCC AACCGGGAAT ACACATTTGT
TTTGTTGTCA GTGCAATAAG CACAGACGCC TATGCAATGC CGAGATTGAG ATAATTTTTA TTGTTTGTTG CCTGGAAATT
GTCAAATTAC GTTTTATATT AATTCCATAC CATACATTAA CTCTTGCA

>Vigan.04G217700.01
ATGGCTTTCT CCGACTCTTC TTCGGGCCGC AGCTCTCTCA TCCCCTCCTT CCTATACTCC TCGTCCTCCA AGACGCTTCC
TCTCCACCGT ATGCTCCACT CCACCGCCGC TGCCGCCGCC GCCCCACCCT CGGCACCGCC GGCAAACCTC GATTCTGGAT
CGCGCGGCTT CATGATTCCC TCTCCCAGCG AGTCACGTAA AATCGAGCTG TACTCTCCCG CCTTCTACGC CGCCTGTACT
GCCGGTGGAA TCCTCAGCTG TGGCCTCACT CACATGACCG TCACTCCTCT TGACCTTGTC AAGTGTAATA TGCAGATCGA
CCCTGCTAAG TACAAGAACA TCACATCTGG ATTTGGGGTT TTGCTTAAGG AGCAGGGCTT CAGGGGCTTT TTCCGTGGTT
GGGTGCCTAC CTTGCTTGGT TACAGTGCCC AGGGTGCTTG CAAATTCGGA TTTTACGAGT TCTTTAAGAA GTATTACTCT
GATATTGCTG GTCCAGAGTA TGCTAGCAAG TACAAGACCT TGATTTACCT TGCTGGTTCC GCTTCTGCCG AGGTTATTGC
TGATGTTGCT CTTTGCCCCT TCGAGGCTGT GAAGGTCCGT GTCCAAACAC AGCCTGGTTT TGCTAGGGGT TTGGCTGATG
GGCTCCCAAA ATTTGTGAAA TCTGAAGGAA CTTTGGGGCT GTACAAGGGA ATAGTGCCTC TGTGGGGACG ACAAATTCCA
TACACAATGA TGAAGTTTGC TTCGTTTGAG ACCATAGTGG AGCTGATCTA TAAGCATGCC ATTCCTACTC CAAAGAATGA
GTGCACCAAA AGCCTGCAAC TCGGTGTCAG TTTTGCTGGT GGATATGTTG CTGGTGTGCT TTGTGCAATC GTGTCTCATC
CTGCTGATAA TCTTGTCTCT TTCCTGAACA ATGCTAAAGG AGCAACAGTT GGTGATGCGG TGAGTAAGCT TGGTTTGTGG
GGTCTCTTCA CCCGTGGTCT TCCCCTCCGT ATTGTGATGA TTGGAACTCT TACTGGTGCC CAATGGGGAA TATATGATGC
TTTCAAAGTC TTTGTTGGGC TGCCAACAAC TGGTGGTCCT GCTCCTGCCG CCGCTCCAGC TCCAGCTCCT GGTTCTGACC
TAGCAAAGGC GTAA

>Vigan.04G217700.01
MAFSDSSSGR SSLIPSFLYS SSSKTLPLHR MLHSTAAAAA APPSAPPANL DSGSRGFMIP SPSESRKIEL YSPAFYAACT
AGGILSCGLT HMTVTPLDLV KCNMQIDPAK YKNITSGFGV LLKEQGFRGF FRGWVPTLLG YSAQGACKFG FYEFFKKYYS
DIAGPEYASK YKTLIYLAGS ASAEVIADVA LCPFEAVKVR VQTQPGFARG LADGLPKFVK SEGTLGLYKG IVPLWGRQIP
YTMMKFASFE TIVELIYKHA IPTPKNECTK SLQLGVSFAG GYVAGVLCAI VSHPADNLVS FLNNAKGATV GDAVSKLGLW
GLFTRGLPLR IVMIGTLTGA QWGIYDAFKV FVGLPTTGGP APAAAPAPAP GSDLAKA*