GBrowse Details

Vigan.04G225700.01

Basic Information:
Name: Vigan.04G225700.01
Multiple alignment
Variant Information
Position: Chr04:33147653..33155868 (- strand)
Length: 8216
Functional Information:
Description: Similar to uncharacterized LOC101214890. [XP_004161517.1, Cucumis sativus]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:4.86,10.48,16.55,10.63,21.49,28.80,12.19,8.78
Arabidopsis thaliana homolog: AT3G27050.1
Automatic updates:
Name: NM_001251760 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100527867 (LOC100527867), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr04:33147653..33147872 (- strand)
Length: 220
Type: three_prime_UTR
Position: Chr04:33147873..33147986 (- strand)
Length: 114
Type: CDS
Position: Chr04:33149189..33149254 (- strand)
Length: 66
Type: CDS
Position: Chr04:33149331..33149415 (- strand)
Length: 85
Type: CDS
Position: Chr04:33152169..33152262 (- strand)
Length: 94
Type: CDS
Position: Chr04:33152964..33153021 (- strand)
Length: 58
Type: CDS
Position: Chr04:33153884..33153924 (- strand)
Length: 41
Type: CDS
Position: Chr04:33154018..33154108 (- strand)
Length: 91
Type: CDS
Position: Chr04:33154109..33155868 (- strand)
Length: 1760
Type: five_prime_UTR


>Vigan.04G225700.01
ACCAAAACGG CTTCCCATTA CTCTTCTTTT CAATTTCAAA CCCTCCAAAT ATCCCGCGAA CCCAAAATTC CCACCAAAAC
AATAATCCCT CCCTCCCGCC GCAACACTCT TTCAAAACCA AAGCTTCTCC AATACGCCCT GCAAAATCCC CAAACTACCC
TCTCCCACCT CCAATCTTCT CCCGCAAGCT TTACCTTAAA TTTTCAAATT CCCCGCTCCA ATTTTCAATC ACCTCCTTAT
ATAAACCATC CACTCCCCTC TGTTCAACTC AAACCCTAAA CCCCAATTCT GTAAAGAAAA AACCCTTTTC TCTCTCCCCA
TTTCCAATCC CAAAATGCCT TCAATTCCAG AAGAGCCTCT CTTGGCCCCT AACCCTGATC GATTCTGCAT GTTCCCTATC
CAATACCCCC AAATCTGGGA AATGTACAAG AAAGCAGAAG CCTCGTTCTG GACGGCGGAG GAGGTGGACC TCTCGCAGGA
CATCAGTCAC TGGAACACTC TTACCGACGG CGAGCGCCAT TTCGTCACCC ATGTCCTCGC CTTCTTCGCC GCCTCCGACG
GCATCGTACT AGAAAACCTT GCCGGCCGTT TTATGAAGGA GGTCCAGGTC TCCGAGGCTC GCGCCTTTTA CGGCTTCCAG
ATCGCTATCG AGAACATTCA CTCCGAGATG TACAGCCTCC TCCTCGAAAC CTACATAAAA GACTCCGTAG AGAAAACCCG
TCTCTTTCAC GCCATTGACA CCATTCCCTG CGTCACCAAG AAGGCCAACT GGGCCCTCCG CTGGATCGAC TCCTCCGAGT
CCTTCGCCGA GCGCCTCGTC GCCTTTGCCT GCGTCGAGGG TATCTTCTTC TCCGGAAGCT TTTGCTCCAT CTTCTGGCTC
AAGAAACGGG GCCTCATGCC AGGACTCACT TTCTCCAACG AACTCATCTC CCGCGACGAG GGTCTCCATT GCGACTTCGC
TTGCCTGCTC TACTCTATTA TGCGGACCAA GCTCCCCGAG GAGCGCGTGA GGGAGATTGT GCGCGATGCT GTGGACATCG
AGAGGGAGTT CGTCTGCGAC GCGCTTCCTT GTGCGTTGGT GGGGATGAAC GGGGCCTTGA TGAGTCAGTA CATTGAGTTT
GTTGCTGATA GGTTGCTCGG TGCCCTTGGG TGCGGGAAGG TGTACAATGT ACAGAACCCA TTCGATTGGA TGGAGCTGAT
TTCGCTGCAG GGGAAGACCA ACTTCTTCGA GAAGCGCGTG GGGGAGTACC AGAAGGCTTC AGTTATGTCC AGCTTGAACG
GTAACGGTGA TGCCCACGTC TTCAAGATGG ATGAAGATTT TTAGTTTATT GGAGTTAGCC TTCGTCTTTC ATCATAGTAA
TATTTCACTG TATTTTTACC GTTGTCAAAT AGTTTATGGG CTTATTTTGT TTTTAGTGGT AGTATTTAGA AATTTTTTAT
TGTTTCTGAT TTTTCTTTGA GGAATGATAA AATATACTTT CAGTTTCCCT GTACTGTGAC TTTTTATTGA TTTAATAATA
AATTAGCCGA GGTTAATGAA AAAAGGAAAA TGGTAACATT TTACGTATTT GTATTTACTT TTAATGGTAA AATATGATAT
TCGAGACCAT GTTTATCTAA AGTAAAAAGT ATGAATGTGT GGAAAGGTTC GAACTTAAGC TTATTCGCTC CGTGATTCGC
CATTAATCGT ATCGGTTTAG TTGCACAGTG ACTCGCCAGG CTGGTATATC TTCGTTCTAC CGTGTTTATG AGCGTTACGA
ATGGCATCCG GGACGCAAAG TACTGGGATG TTAACAAGAG AGCAACTTTT CCATCTTTTC GATCGTTTCA GTTTCCTTAC
TTCTCAACCT GATGTGAAGA AAAAGATTTC TGGGGCTGTA CAGGATAAGC AGGAGGCTGT TGCTGTGACC ACTGCAATAC
AAGAAGAGAT ATTTTCGGAG ATGGGTGTTG ATCCAAGATT TGGTATCTCG TGCCTGGGAA AAGTCAGTAC TGTATATGAG
AATGACATGG ATTTGGTGAT TCAGTTTTAT AAATTCCTTT CTAAAGAAGA GGTTGCCTGC GATGAAGCAG AGCTTGAAGA
AGAAGAATTT GCAGAAAAAT TGCTCAACCA ACAAATGTTA CAGGAACAGC AACTAGAGAT GCTGAAGTAC ATGCGCAAGT
TTAACTTGGA CGATCAATGT GCAATCCTTG AGAAGTTACA CCAGCACATG GAAAACGGCA ATTATGAAAG CGAGACATCC
ATTTTGTCAG CTGAGCAGAT CGAAGAGATT GTTCCAAGAA AGGTGTCCCC CCTGTATACG CCAAGGTAGA CTTAGAAGAG
TAGCTTGCGT GACATTTTGT TTGGGAGTTG GCCAAATCAC AATTCTTGAC AAATTATTTA CTTTATTTGG TCAATTTTTG
ACATTTTTAT GTTCATTTTA TTTCTGTACT TGGACTGCTT TAAGGTTAAC AATTTTAGAT GTGGGAGGTG TTTACAGCCT
TTTCATGGCT AGGCTTTCTG CCTCAGCATT AAGAACATAC CAACCACGG

>Vigan.04G225700.01
ATGGCATCCG GGACGCAAAG TACTGGGATG TTAACAAGAG AGCAACTTTT CCATCTTTTC GATCGTTTCA GTTTCCTTAC
TTCTCAACCT GATGTGAAGA AAAAGATTTC TGGGGCTGTA CAGGATAAGC AGGAGGCTGT TGCTGTGACC ACTGCAATAC
AAGAAGAGAT ATTTTCGGAG ATGGGTGTTG ATCCAAGATT TGGTATCTCG TGCCTGGGAA AAGTCAGTAC TGTATATGAG
AATGACATGG ATTTGGTGAT TCAGTTTTAT AAATTCCTTT CTAAAGAAGA GGTTGCCTGC GATGAAGCAG AGCTTGAAGA
AGAAGAATTT GCAGAAAAAT TGCTCAACCA ACAAATGTTA CAGGAACAGC AACTAGAGAT GCTGAAGTAC ATGCGCAAGT
TTAACTTGGA CGATCAATGT GCAATCCTTG AGAAGTTACA CCAGCACATG GAAAACGGCA ATTATGAAAG CGAGACATCC
ATTTTGTCAG CTGAGCAGAT CGAAGAGATT GTTCCAAGAA AGGTGTCCCC CCTGTATACG CCAAGGTAG

>Vigan.04G225700.01
MASGTQSTGM LTREQLFHLF DRFSFLTSQP DVKKKISGAV QDKQEAVAVT TAIQEEIFSE MGVDPRFGIS CLGKVSTVYE
NDMDLVIQFY KFLSKEEVAC DEAELEEEEF AEKLLNQQML QEQQLEMLKY MRKFNLDDQC AILEKLHQHM ENGNYESETS
ILSAEQIEEI VPRKVSPLYT PR*