GBrowse Details

Vigan.04G264700.01

Basic Information:
Name: Vigan.04G264700.01
Multiple alignment
Variant Information
Position: Chr04:38502826..38508092 (+ strand)
Length: 5267
Functional Information:
Description: Similar to Protein kinase. [A2Q2Z4, Medicago truncatula]
GO: Biological Process: mitochondrial fission (GO:0000266)
Molecular Function: protein binding (GO:0005515)
InterPro: Tetratricopeptide-like helical (IPR011990)
Mitochondria fission 1 protein (IPR016543)
Fis1, N-terminal tetratricopeptide repeat (IPR028058)
Fis1, C-terminal tetratricopeptide repeat (IPR028061)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:48.51,39.78,9.63,6.58,20.32,16.91,11.94,8.63
Arabidopsis thaliana homolog: AT3G57090.1
Automatic updates:
Name: NM_001252791 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max mitochondrial fission 1 protein-like (LOC100785425), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr04:38502826..38503009 (+ strand)
Length: 184
Type: five_prime_UTR
Position: Chr04:38503010..38503090 (+ strand)
Length: 81
Type: CDS
Position: Chr04:38503620..38503758 (+ strand)
Length: 139
Type: CDS
Position: Chr04:38504699..38504820 (+ strand)
Length: 122
Type: CDS
Position: Chr04:38507443..38507506 (+ strand)
Length: 64
Type: CDS
Position: Chr04:38507592..38507677 (+ strand)
Length: 86
Type: CDS
Position: Chr04:38507678..38508092 (+ strand)
Length: 415
Type: three_prime_UTR


>Vigan.04G264700.01
AAATTTGAAA TCAGACAAGC GTATTTGAAC ATTATTCAAT GTGTAAACGC AATATATAAT AAAAATATAT TTGTCATTTT
GTAAGGTTTG TTTGTACTAA AAAGATAGTT CGAAATTCCA AAAATCCCAA ACCTATAAAT ACCATTGGGT ATTCAGTTAC
CGTTTCTGTG GTGTGGACGC CAAAATGGGA AGCCTACTCG AGTCCATCGG AAATTTCTTC ACCGGCGGCG AACAGATCCC
GTGGTGCGAC CGTGACGTCA TTGCTGGCTG TGAGAGAGAA GTTGCAGAGG CTGCTCGTGG TGACTCTGAG GAGCGGAAGA
ATGAGAGTAT AATGAGGTTG TCGTGGGCTC TTGTTCATTC AAGGCAAAAG GAAGATGTTC AGCGCGGAAT AGCCATGCTT
GAAACTTCTT TGGGCAATGA TAAAAGTCCT TTGCATCAAA GAGAGAAGTT ATATCTTCTG GCTGTTGGTT ACTATAGAAG
TAATGACTAT GGAAGGAGCA GGCAGCTTGT GGAGCAATGC TTGCAGATTG CACCTGATTG GAGGCAGGCA CTAGCCCTCA
AGAAAATAGT TGAAGATCGA ATTGCTAAAG ATGGTGTAAT AGGAATTGGC ATCACTGCAA CTGCTCTGGG ACTTATAGTT
GGTGGCATTG CTACCGCATT GGCCCGGAGG AATTGAAAAT TTTGAGGAAA TAATCTCAAC CGAAAATGAT GTTTTTTTAT
TTATTTACTT TTCTTCTGGA AACATGTTAA AAGTCAATGG GAAACAATCC TCCGTTGAGA AGTACTGCTT CTACTTTTTT
GTTTGTCAAA GGGACTCTGT TCAAATTCTT GGGTACCTAA TTCCAAATTA CTCTGTTCAA ATGAATTCTT TTTCTACAAC
TGGGAGGATT ACACATGCCG TACATGGTAA TAACTTTAAG CCACTGGAGC TCTAATCATA TATTAGTAGA TTTACATCTT
GTTTGGATTA AATGATGGAA AATGATGGAG TCCAAAAATA AGAGAAAGAG GTGAGAAATA AATGAAAACG AATGTTGATT
TGGATCAACA AATGAAAAGA AATGACAAAA AATATTTTTA TTATAATGTT A

>Vigan.04G264700.01
ATGGGAAGCC TACTCGAGTC CATCGGAAAT TTCTTCACCG GCGGCGAACA GATCCCGTGG TGCGACCGTG ACGTCATTGC
TGGCTGTGAG AGAGAAGTTG CAGAGGCTGC TCGTGGTGAC TCTGAGGAGC GGAAGAATGA GAGTATAATG AGGTTGTCGT
GGGCTCTTGT TCATTCAAGG CAAAAGGAAG ATGTTCAGCG CGGAATAGCC ATGCTTGAAA CTTCTTTGGG CAATGATAAA
AGTCCTTTGC ATCAAAGAGA GAAGTTATAT CTTCTGGCTG TTGGTTACTA TAGAAGTAAT GACTATGGAA GGAGCAGGCA
GCTTGTGGAG CAATGCTTGC AGATTGCACC TGATTGGAGG CAGGCACTAG CCCTCAAGAA AATAGTTGAA GATCGAATTG
CTAAAGATGG TGTAATAGGA ATTGGCATCA CTGCAACTGC TCTGGGACTT ATAGTTGGTG GCATTGCTAC CGCATTGGCC
CGGAGGAATT GA

>Vigan.04G264700.01
MGSLLESIGN FFTGGEQIPW CDRDVIAGCE REVAEAARGD SEERKNESIM RLSWALVHSR QKEDVQRGIA MLETSLGNDK
SPLHQREKLY LLAVGYYRSN DYGRSRQLVE QCLQIAPDWR QALALKKIVE DRIAKDGVIG IGITATALGL IVGGIATALA
RRN*