GBrowse Details

Vigan.04G266400.01

Basic Information:
Name: Vigan.04G266400.01
Multiple alignment
Variant Information
Position: Chr04:38635617..38640539 (+ strand)
Length: 4923
Functional Information:
Description: Similar to peroxisomal nicotinamide adenine dinucleotide carrier-like. [XP_004513596.1, Cicer arietinum]
InterPro: Mitochondrial substrate/solute carrier (IPR018108)
Mitochondrial carrier domain (IPR023395)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:2.70,2.94,8.16,37.39,5.58,4.72,14.34,11.67
Automatic updates:
Name: NM_001255498 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max peroxisomal nicotinamide adenine dinucleotide carrier-like (LOC100775304), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr04:38635617..38635775 (+ strand)
Length: 159
Type: five_prime_UTR
Position: Chr04:38635776..38635862 (+ strand)
Length: 87
Type: CDS
Position: Chr04:38635929..38636030 (+ strand)
Length: 102
Type: CDS
Position: Chr04:38636111..38636185 (+ strand)
Length: 75
Type: CDS
Position: Chr04:38636865..38636995 (+ strand)
Length: 131
Type: CDS
Position: Chr04:38637130..38637184 (+ strand)
Length: 55
Type: CDS
Position: Chr04:38637682..38637834 (+ strand)
Length: 153
Type: CDS
Position: Chr04:38638313..38638381 (+ strand)
Length: 69
Type: CDS
Position: Chr04:38638469..38638576 (+ strand)
Length: 108
Type: CDS
Position: Chr04:38638726..38638794 (+ strand)
Length: 69
Type: CDS
Position: Chr04:38639124..38639178 (+ strand)
Length: 55
Type: CDS
Position: Chr04:38639833..38640023 (+ strand)
Length: 191
Type: CDS
Position: Chr04:38640024..38640539 (+ strand)
Length: 516
Type: three_prime_UTR


>Vigan.04G266400.01
AAAGCGTTTA CTAACAGACT TTTCCGGGTG AAGTCAAAGT ATTGGCATGT CCAAATATTC CTGATATCTT CTCTTTCAAA
CAAGTATGTT AAGTGAAGCT AAAAGAATTA AGATTTAAGG CAGAAGAAAA GAAAGAATTG AACAAGAGTT GCAACAACCA
TGTCAGAATC AAACGCAATT GCAAATGGAT TGGCTGGTGC AGGTGGTGGA ATCATTGCTC AAATCATCAC TTATCCTCTT
CAAACGGTAA ACACGCGTCA GCAAACTGAG AGAACACTCA AGAGGAACAA GCAAAGTTTG CCCTCTAACA CAACCACTGC
TCCTGGCACT CTTCTTCAGA TCTTTCAGGT CATTAGAACT GAGGGTTGGG GTGGACTCTA CAGTGGCCTC AAGCCTTCTC
TTCTTGGAAC TGCTGCTTCT CAGGGCATTT ACTACTATTT CTATCAAGTT TTCAAGAACA AGGCAGTGGC GATTGCAGCT
GCACGGAAAG TGAAAGGGCG TGGAGATGGT ACTGTTGGGA TGTTTGGTTG GCTTGTTGTG GCTGCAATTG CTGGGTCCTT
GAATGTGTTG CTGACAAATC CAATATGGGT TTTAGTGACT CGGATGCAGA CTCATACTCA AGCAGAAAGG AAAATTATGG
AGGAAAAGAA AGAAGCTTTA AGGAAGGCTG CTTCTGAAAG CGCCATAGCA GATTCCACAT TGCAAGATAA ATTGGATGAA
CTGAATTCTA TAAAACCTCG ACCATTTGGA ACTATACATG CAGCTAAAGA AGTCTACAAT GAAGCGGGTA CAGTAGGATT
TTGGAAGGGT GTCTTCCCTG CCCTTATTAT GGTATGTAAT CCATCAATTC AGTTTATGAT TTATGAAAGC TCATTAAAGC
ATCTAAGGGC AAAACGTGCC GCTAAGAAGC AAGGGAATAC AAGTATATCC GCTTTGGAGG TCTTTTTGGT GGGAGCAATA
GCTAAGCTTG GAGCCACTGT GACAACATAT CCATTACTAG TTGTGAAGTC AAGGCTTCAA GCAAAACAGG AGATTGGTGG
AAATAACTCC TTAAGATACT CAGGTACTTT TGATGCTGTA CTTAAAATGA TCCGTTATGA AGGAATAACA GGCTTCTATA
AGGGGATGAG CACAAAGATA GTGCAGAGTG TTTTTGCAGC CTCTGTTCTA TTTATGATCA AAGAGGAGCT TGTTAAGGCT
TTTATAGTTC TAACCAATAA GAGCAAAAAA GTTTCATCAA ATTTGAGTAG TTGACATTTT TACCATATGA AAGCGATAAT
AAGTATATCA CTCGGTTTAC CTTTCCCTAT TGTTTATTCA CTGATTGTGG GGAGAGAGAG GTGAAGTCCT CACCAAAATA
ATGGATGAAG TTAACTCCAC TAGTGCAGAT GAGCCATCCT TATGTTATCC CTTTGGCATG CAGTGCTGCA GAACTCCTTG
GAATTTCTCA TAGTTCATTT CAAGAACCAA GGAACTGAGA ACATTCAACA ATCATGAGAG TGACTTCTTC CAACAGCAGT
GTTATGCAAG CATTCTTTTC CAAAGAATTA AAAACCAAAG TGCTTTGTGT ATAATTCTTG AATAAATTAA CAGACAATCA
TTATGCTGAG CCATTGAATT GCATGTATAT TGGTATGGTA AGAAAAGTTC ATATGTCATC ATGGATAAAT ACACTACAGT
GACAGATAAT TTTTTTTTCC ATCTGCAATG AGTTGTTTAT GTACCTTATG TTTGGTTGAT TTGAATGTGC TTGATTGAAA
ACTGGAAAGA 

>Vigan.04G266400.01
ATGTCAGAAT CAAACGCAAT TGCAAATGGA TTGGCTGGTG CAGGTGGTGG AATCATTGCT CAAATCATCA CTTATCCTCT
TCAAACGGTA AACACGCGTC AGCAAACTGA GAGAACACTC AAGAGGAACA AGCAAAGTTT GCCCTCTAAC ACAACCACTG
CTCCTGGCAC TCTTCTTCAG ATCTTTCAGG TCATTAGAAC TGAGGGTTGG GGTGGACTCT ACAGTGGCCT CAAGCCTTCT
CTTCTTGGAA CTGCTGCTTC TCAGGGCATT TACTACTATT TCTATCAAGT TTTCAAGAAC AAGGCAGTGG CGATTGCAGC
TGCACGGAAA GTGAAAGGGC GTGGAGATGG TACTGTTGGG ATGTTTGGTT GGCTTGTTGT GGCTGCAATT GCTGGGTCCT
TGAATGTGTT GCTGACAAAT CCAATATGGG TTTTAGTGAC TCGGATGCAG ACTCATACTC AAGCAGAAAG GAAAATTATG
GAGGAAAAGA AAGAAGCTTT AAGGAAGGCT GCTTCTGAAA GCGCCATAGC AGATTCCACA TTGCAAGATA AATTGGATGA
ACTGAATTCT ATAAAACCTC GACCATTTGG AACTATACAT GCAGCTAAAG AAGTCTACAA TGAAGCGGGT ACAGTAGGAT
TTTGGAAGGG TGTCTTCCCT GCCCTTATTA TGGTATGTAA TCCATCAATT CAGTTTATGA TTTATGAAAG CTCATTAAAG
CATCTAAGGG CAAAACGTGC CGCTAAGAAG CAAGGGAATA CAAGTATATC CGCTTTGGAG GTCTTTTTGG TGGGAGCAAT
AGCTAAGCTT GGAGCCACTG TGACAACATA TCCATTACTA GTTGTGAAGT CAAGGCTTCA AGCAAAACAG GAGATTGGTG
GAAATAACTC CTTAAGATAC TCAGGTACTT TTGATGCTGT ACTTAAAATG ATCCGTTATG AAGGAATAAC AGGCTTCTAT
AAGGGGATGA GCACAAAGAT AGTGCAGAGT GTTTTTGCAG CCTCTGTTCT ATTTATGATC AAAGAGGAGC TTGTTAAGGC
TTTTATAGTT CTAACCAATA AGAGCAAAAA AGTTTCATCA AATTTGAGTA GTTGA

>Vigan.04G266400.01
MSESNAIANG LAGAGGGIIA QIITYPLQTV NTRQQTERTL KRNKQSLPSN TTTAPGTLLQ IFQVIRTEGW GGLYSGLKPS
LLGTAASQGI YYYFYQVFKN KAVAIAAARK VKGRGDGTVG MFGWLVVAAI AGSLNVLLTN PIWVLVTRMQ THTQAERKIM
EEKKEALRKA ASESAIADST LQDKLDELNS IKPRPFGTIH AAKEVYNEAG TVGFWKGVFP ALIMVCNPSI QFMIYESSLK
HLRAKRAAKK QGNTSISALE VFLVGAIAKL GATVTTYPLL VVKSRLQAKQ EIGGNNSLRY SGTFDAVLKM IRYEGITGFY
KGMSTKIVQS VFAASVLFMI KEELVKAFIV LTNKSKKVSS NLSS*