GBrowse Details

Vigan.04G285600.01

Basic Information:
Name: Vigan.04G285600.01
Multiple alignment
Variant Information
Position: Chr04:40820220..40822377 (- strand)
Length: 2158
Functional Information:
Description: Similar to uncharacterized protein. [C6T8X5, Glycine max]
InterPro: Rhodanese-like domain (IPR001763)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:11.40,5.61,19.22,111.73,2.90,9.21,0.47,22.57
Arabidopsis thaliana homolog: AT2G42220.1
Automatic updates:
Name: BT090703 NCBI(nuccore)
Organism: Glycine max
Description: Soybean clone JCVI-FLGm-14H21 unknown mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr04:40820220..40820613 (- strand)
Length: 394
Type: three_prime_UTR
Position: Chr04:40820614..40820684 (- strand)
Length: 71
Type: CDS
Position: Chr04:40820762..40820866 (- strand)
Length: 105
Type: CDS
Position: Chr04:40820945..40821030 (- strand)
Length: 86
Type: CDS
Position: Chr04:40821385..40821535 (- strand)
Length: 151
Type: CDS
Position: Chr04:40821622..40821878 (- strand)
Length: 257
Type: CDS
Position: Chr04:40822136..40822302 (- strand)
Length: 167
Type: CDS
Position: Chr04:40822303..40822377 (- strand)
Length: 75
Type: five_prime_UTR


>Vigan.04G285600.01
CCAGCAAGGG TACCCGTGAA GTTTTAGAAT CTTGAAGGCT TTAAGATTTC ACAGATATTT GACACGTGGC AGAAAATGAT
TGCCGATTTC AAATTTCATG GCCCACTAAA TTTAACAGGT GGCATGATTG AGTTCACCTT TGAAAGACAG CTTCAGCGGA
TGGATACGAG TGTCAAACAA TTTTCATTTT CATACAAAAT GGCAGGAACT GGTTTCTACA CTTCCTGTCT TTCCTCTTCC
AGCAACTTAG GGGCATGTTG GTTGGTATTA AAAACTCACA ATGCAAGGGC CCTGCCAGGG AAACTACCTG GAACTGGAAT
GAGAAGATTG GCAATAAGAG CAGAAGTTGA ATTTGTGAAC GCTGACAAGG CGAAGGAACT TGTAGAAGTG GATGGGTATG
CTGTTCTTGA TGTGAGGGAC AAGAATCAAT TTGAACGAGC TCACATAAAA TCTTGTAGTC ATGTGCCTCT TTTTATTGAA
AACAAAGACA ATGATCCTGG TACTATTATC AAAAGGCAAC TGCACAATAA CTTTTCTGGG TTGTTCTTTG GGTTGCCATT
CACTAAGCCA AATCCTGATT TTATACAATC TGTTAAGACC CAGTTTCCAC CTGAAAGTAA ACTCTTGGTT GTGTGCCAGG
AAGGACTGAG GTCTGCTGCT GCAGCAGATA AGTTAGAGAA AGCTGGTTAT GAAAATATAG CATGCATAAC ATCTGGCCTT
CAAACCGTAA AACCAGGGAC ATTTGAGTCT GTAGGGTCCA CAGAGTTGGA GAATGCAGGC AAAGCTGGTT TGGTGACAAT
CCAAGGAAAA ATCTCAACTG TGTTGGGAAC GATTCTTGTT TGTGCATATA TATTCGTTAC ATTCTTCCCT GAGCAAGCAG
AGAAGCTATT CCAATTGGCC CCTACAGGAT AAGCCTAAAA ATTCCATTAT AGTCGTTCTT GATTTTGTTC TTTCCCACTC
TTTATGCATG TAGAGTAATA AAGGAACGTG TGATTAGAAT TGAGGAACCA AAAACAAAAG ATGAAATATG AACAAAGTGA
TGGAAGAGTT AGTAGCGTGA GTATGGATAC AATCGTTAAG TAATCAAATT GTTTAGTATT CTCCATTGAG AAAGGACGTA
TATACCCATT TGGAATGTTA AAGATACCAG TTATTTAGAA TTTATACTGC TACTGTAGTT TTCCTTTGAA GATAGTTCAT
TTTCTTTTCT TTTCTTCTTG TTGCCGTTTG TTGTATAAAA GAAAGGTTTA TAGTGTGATA ATGATGCTTA TGATATGATG
CTTTTATCTG TGCTTCATGT TTAAAA

>Vigan.04G285600.01
ATGATTGCCG ATTTCAAATT TCATGGCCCA CTAAATTTAA CAGGTGGCAT GATTGAGTTC ACCTTTGAAA GACAGCTTCA
GCGGATGGAT ACGAGTGTCA AACAATTTTC ATTTTCATAC AAAATGGCAG GAACTGGTTT CTACACTTCC TGTCTTTCCT
CTTCCAGCAA CTTAGGGGCA TGTTGGTTGG TATTAAAAAC TCACAATGCA AGGGCCCTGC CAGGGAAACT ACCTGGAACT
GGAATGAGAA GATTGGCAAT AAGAGCAGAA GTTGAATTTG TGAACGCTGA CAAGGCGAAG GAACTTGTAG AAGTGGATGG
GTATGCTGTT CTTGATGTGA GGGACAAGAA TCAATTTGAA CGAGCTCACA TAAAATCTTG TAGTCATGTG CCTCTTTTTA
TTGAAAACAA AGACAATGAT CCTGGTACTA TTATCAAAAG GCAACTGCAC AATAACTTTT CTGGGTTGTT CTTTGGGTTG
CCATTCACTA AGCCAAATCC TGATTTTATA CAATCTGTTA AGACCCAGTT TCCACCTGAA AGTAAACTCT TGGTTGTGTG
CCAGGAAGGA CTGAGGTCTG CTGCTGCAGC AGATAAGTTA GAGAAAGCTG GTTATGAAAA TATAGCATGC ATAACATCTG
GCCTTCAAAC CGTAAAACCA GGGACATTTG AGTCTGTAGG GTCCACAGAG TTGGAGAATG CAGGCAAAGC TGGTTTGGTG
ACAATCCAAG GAAAAATCTC AACTGTGTTG GGAACGATTC TTGTTTGTGC ATATATATTC GTTACATTCT TCCCTGAGCA
AGCAGAGAAG CTATTCCAAT TGGCCCCTAC AGGATAA

>Vigan.04G285600.01
MIADFKFHGP LNLTGGMIEF TFERQLQRMD TSVKQFSFSY KMAGTGFYTS CLSSSSNLGA CWLVLKTHNA RALPGKLPGT
GMRRLAIRAE VEFVNADKAK ELVEVDGYAV LDVRDKNQFE RAHIKSCSHV PLFIENKDND PGTIIKRQLH NNFSGLFFGL
PFTKPNPDFI QSVKTQFPPE SKLLVVCQEG LRSAAAADKL EKAGYENIAC ITSGLQTVKP GTFESVGSTE LENAGKAGLV
TIQGKISTVL GTILVCAYIF VTFFPEQAEK LFQLAPTG*