GBrowse Details

Vigan.04G310800.01

Basic Information:
Name: Vigan.04G310800.01
Multiple alignment
Variant Information
Position: Chr04:43508946..43513507 (+ strand)
Length: 4562
Functional Information:
Description: Similar to Uncharacterized protein. [I1JP54, Glycine max]
GO: Biological Process: response to metal ion (GO:0010038)
Biological Process: phytochelatin biosynthetic process (GO:0046938)
Molecular Function: glutathione gamma-glutamylcysteinyltransferase activity (GO:0016756)
Molecular Function: metal ion binding (GO:0046872)
InterPro: Phytochelatin synthase (IPR007719)
Phytochelatin synthase, C-terminal (IPR015407)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.00,0.00,0.29,0.39,0.52,0.00,2.69,0.04
Arabidopsis thaliana homolog: AT5G44070.1
Automatic updates:
Name: MT318142 NCBI(nuccore)
Organism: Vigna mungo var. mungo
Description: Vigna mungo var. mungo clone KBJBPCS1 glutathione gamma glutamylcystenyl transferase 3 (PCS1) mRNA, complete cds.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr04:43508946..43509043 (+ strand)
Length: 98
Type: five_prime_UTR
Position: Chr04:43509044..43509121 (+ strand)
Length: 78
Type: CDS
Position: Chr04:43509199..43509355 (+ strand)
Length: 157
Type: CDS
Position: Chr04:43509429..43509667 (+ strand)
Length: 239
Type: CDS
Position: Chr04:43509901..43510064 (+ strand)
Length: 164
Type: CDS
Position: Chr04:43510878..43510929 (+ strand)
Length: 52
Type: CDS
Position: Chr04:43511271..43511498 (+ strand)
Length: 228
Type: CDS
Position: Chr04:43511637..43512155 (+ strand)
Length: 519
Type: CDS
Position: Chr04:43513262..43513318 (+ strand)
Length: 57
Type: CDS
Position: Chr04:43513319..43513507 (+ strand)
Length: 189
Type: three_prime_UTR


>Vigan.04G310800.01
GACGAAGAAA GAAAGAGGAA GAGAAGATAG TAATTAACGG TAATTTGTTA AGTTCAGAGG AGAAACATTA CTGTAGGAGT
TGCAGAAGAG AAGGTTTGAT GTGCATGGCG AGCCCAGGTT TATACCGCAG AGAGCTACCT TCCCCTGCAA TCGAGTTTGC
TTCGCCCCTA GGCAAGAAGC TGTTCGGCGA GGCACACGAG CAAGGAACCA TGGAAGCCTT CTTCAAGTTA ATATCCTACT
ATCAGACGCA ATCAGAGCCT GCATACTGCG GTCTCGCCAC ACTTTCCGTT GTTCTCAATG CCCTTGCTAT TGATCCTGGA
AGAAAATGGA AAGGTCCTTG GAGATGGTTT GACGAGTCCA TGCTGGATTG CTGTGAGCCT TTGGCTCAAA TTAAACTGGA
AGGCATTACG TTCGGGAAAG TTGCGTGTTT GGCTCGATGC AATGGAGCTA AGGTGGAAGC CTTTCGATCG GATAAAAGCT
CGGTTGATGA GTTTCGCAAA CGTGTGATTT CGTGCTCTCA GTCTGAGGAT TCTCACGTCA TTGTATCTTA CCACAGGACA
CCTCTCAATC AGACTGGAAT TGGTCATTTT TCACCAGTTG GAGGATATCA CGCTGAAAGG GATATGGTCC TCGTATTGGA
TGTTGCTCGT TTCAAGTATC CTCCTCACTG GGTTCCCCTT ACCCTTCTCT GGGAGGGAAT GAGCACCATT GATCAAGCAA
CGGGACTTCG AAGGGGGTAC ATGGTTATTT CAAGGCTTAA CAGAGCACCC TCTATACTTT ATACTGTGAG TTGTAGACAT
GAAGGTTGGA GCCGTGTCGC CAAATTTCTA ACTGAAGATG TCCCTCAACT TCTTAAGTCA GAGGATCTAA AAGATGTTCA
GGAAGTGCTG TCTGTTATTT TTAAACCGCC TCCTAGTGAA TTGAGACGGT TAATAACATG GATTGCTGAA GTTCGCAGAC
AAGAAGATGG AAATCTCACA TTGAGCGACG AGGAAAAAGG AAGGCTTGCT TTAAAGGCTG ACATACTGGA ACAGATTCGA
ACAACTGCAC TCTTCAAACA CGTGACCAGA TGGTTGGATT CTGAAAATTC ACGTTCTAAA ACATATGCAA ACCTTGGTGA
CGAAGATACG CTAGCAGTAC TTGCCACCGG TGTTTGTTGC CAAGGGGCGG ATCTTTTGAC TGGTTGTGGT AGGTTAGGTT
TGTCAGGTGG AAAAAGCTGC GGTCAAATAG AGGTAAAACT TCTGAATGTT GACAGTGAAA ATCCAGGAAC ATTAGTTTCA
GGAACTGTTA CAACTAGTGG TGGTAGTGAA GAAGTCGAAG TGTTGGTTCC TCTGTGTCAA AGGGAGCCAA GTAGGTTATG
TCTTTATAAT GAAGGTCACT GCATAGAGAT GCACCCGTCT GATGCAGATT TCTTAACGGT ACTTTTATTG GCCTTGCCCT
TGCATACGTG GTCGGGTTTT AAAGAAGAAA AGCTGCGAGT GGAAGTTTTG AGCCTTCTAG CAACTGAAGA TCTCCCTCCC
CTACTTCAGG AAGAGGTTTT GTTATTGCGA GACCAACTTC ATTTTCTCAT GCAACGTTGT GGTGACGTGT AGAACACACC
TGAGAAAAAC TATTGTTCTA CATTTGTGCA AGATGTCTGA GCTGTACAGC GTAATTCTGT ACGGAAGAAT AACATGCAGA
TTTGCATAAA TTGAAAGATG AATCAACTGA ATGTGCCAAA AGGTGAACGT TCTCTGATAT TTCTTCTCAC TTGGGTAATA
AATTATGAGA AGTTAAAACA G

>Vigan.04G310800.01
ATGTGCATGG CGAGCCCAGG TTTATACCGC AGAGAGCTAC CTTCCCCTGC AATCGAGTTT GCTTCGCCCC TAGGCAAGAA
GCTGTTCGGC GAGGCACACG AGCAAGGAAC CATGGAAGCC TTCTTCAAGT TAATATCCTA CTATCAGACG CAATCAGAGC
CTGCATACTG CGGTCTCGCC ACACTTTCCG TTGTTCTCAA TGCCCTTGCT ATTGATCCTG GAAGAAAATG GAAAGGTCCT
TGGAGATGGT TTGACGAGTC CATGCTGGAT TGCTGTGAGC CTTTGGCTCA AATTAAACTG GAAGGCATTA CGTTCGGGAA
AGTTGCGTGT TTGGCTCGAT GCAATGGAGC TAAGGTGGAA GCCTTTCGAT CGGATAAAAG CTCGGTTGAT GAGTTTCGCA
AACGTGTGAT TTCGTGCTCT CAGTCTGAGG ATTCTCACGT CATTGTATCT TACCACAGGA CACCTCTCAA TCAGACTGGA
ATTGGTCATT TTTCACCAGT TGGAGGATAT CACGCTGAAA GGGATATGGT CCTCGTATTG GATGTTGCTC GTTTCAAGTA
TCCTCCTCAC TGGGTTCCCC TTACCCTTCT CTGGGAGGGA ATGAGCACCA TTGATCAAGC AACGGGACTT CGAAGGGGGT
ACATGGTTAT TTCAAGGCTT AACAGAGCAC CCTCTATACT TTATACTGTG AGTTGTAGAC ATGAAGGTTG GAGCCGTGTC
GCCAAATTTC TAACTGAAGA TGTCCCTCAA CTTCTTAAGT CAGAGGATCT AAAAGATGTT CAGGAAGTGC TGTCTGTTAT
TTTTAAACCG CCTCCTAGTG AATTGAGACG GTTAATAACA TGGATTGCTG AAGTTCGCAG ACAAGAAGAT GGAAATCTCA
CATTGAGCGA CGAGGAAAAA GGAAGGCTTG CTTTAAAGGC TGACATACTG GAACAGATTC GAACAACTGC ACTCTTCAAA
CACGTGACCA GATGGTTGGA TTCTGAAAAT TCACGTTCTA AAACATATGC AAACCTTGGT GACGAAGATA CGCTAGCAGT
ACTTGCCACC GGTGTTTGTT GCCAAGGGGC GGATCTTTTG ACTGGTTGTG GTAGGTTAGG TTTGTCAGGT GGAAAAAGCT
GCGGTCAAAT AGAGGTAAAA CTTCTGAATG TTGACAGTGA AAATCCAGGA ACATTAGTTT CAGGAACTGT TACAACTAGT
GGTGGTAGTG AAGAAGTCGA AGTGTTGGTT CCTCTGTGTC AAAGGGAGCC AAGTAGGTTA TGTCTTTATA ATGAAGGTCA
CTGCATAGAG ATGCACCCGT CTGATGCAGA TTTCTTAACG GTACTTTTAT TGGCCTTGCC CTTGCATACG TGGTCGGGTT
TTAAAGAAGA AAAGCTGCGA GTGGAAGTTT TGAGCCTTCT AGCAACTGAA GATCTCCCTC CCCTACTTCA GGAAGAGGTT
TTGTTATTGC GAGACCAACT TCATTTTCTC ATGCAACGTT GTGGTGACGT GTAG

>Vigan.04G310800.01
MCMASPGLYR RELPSPAIEF ASPLGKKLFG EAHEQGTMEA FFKLISYYQT QSEPAYCGLA TLSVVLNALA IDPGRKWKGP
WRWFDESMLD CCEPLAQIKL EGITFGKVAC LARCNGAKVE AFRSDKSSVD EFRKRVISCS QSEDSHVIVS YHRTPLNQTG
IGHFSPVGGY HAERDMVLVL DVARFKYPPH WVPLTLLWEG MSTIDQATGL RRGYMVISRL NRAPSILYTV SCRHEGWSRV
AKFLTEDVPQ LLKSEDLKDV QEVLSVIFKP PPSELRRLIT WIAEVRRQED GNLTLSDEEK GRLALKADIL EQIRTTALFK
HVTRWLDSEN SRSKTYANLG DEDTLAVLAT GVCCQGADLL TGCGRLGLSG GKSCGQIEVK LLNVDSENPG TLVSGTVTTS
GGSEEVEVLV PLCQREPSRL CLYNEGHCIE MHPSDADFLT VLLLALPLHT WSGFKEEKLR VEVLSLLATE DLPPLLQEEV
LLLRDQLHFL MQRCGDV*