GBrowse Details

Vigan.04G330900.01

Basic Information:
Name: Vigan.04G330900.01
Multiple alignment
Variant Information
Position: Chr04:45323109..45325644 (+ strand)
Length: 2536
Functional Information:
Description: Similar to membrane magnesium transporter-like. [XP_004493991.1, Cicer arietinum]
InterPro: Magnesium transporter (IPR018937)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:52.93,65.77,39.88,33.52,52.06,92.28,54.12,37.04
Arabidopsis thaliana homolog: AT5G03345.1
Automatic updates:
Name: NM_001251484 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100499690 (LOC100499690), mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001253057 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max membrane magnesium transporter homolog (LOC100792127), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr04:45323109..45323207 (+ strand)
Length: 99
Type: five_prime_UTR
Position: Chr04:45323208..45323280 (+ strand)
Length: 73
Type: CDS
Position: Chr04:45323379..45323431 (+ strand)
Length: 53
Type: CDS
Position: Chr04:45323510..45323610 (+ strand)
Length: 101
Type: CDS
Position: Chr04:45325027..45325120 (+ strand)
Length: 94
Type: CDS
Position: Chr04:45325121..45325644 (+ strand)
Length: 524
Type: three_prime_UTR


>Vigan.04G330900.01
TTGTGACCGA GGATTGGGTA GAACTGAGAT TGGCGTTTGT GACCGGCGAT TGAAAACCCT TTGAAGGTGT TTCAGAGGGA
GACGAAGAAG ATCGTATAAA TGGGTCTAGC TTTAACCGTC GGTGTCTTCG GTGTTCTGGT TCTATTTCAC GCCGCTTATT
CAACTATCCA CTACAGGGGT CTGTTGAAGA TTACAGAGGA GGAGTTTTCA GGGCCTCCAT TTAACGTGGT GATTGAGCTG
TTTGTTGGGC TGCTGCTTTG TTTCTGGGCT GCGCTCACTG TGCCCGGGAA TTTTAAATCC ATACTCCCTC ACTCCGAGGA
GAACAGGATT GTTTCTTTAC CTGCCAACCT AGACTTCATG ATCTTCAATC ACCGAGGCAA GGTCTTTCCT GTGGAACTGG
ATGTGAAGCT GAGACAATGA GGACTGCTAT CCTTCACACG AGGAGGAAAA ACTTTACTCT AGAAAATTAA AAATTTGGGA
TGCGCGTTTG AATATCCGTT GTTTGATGCA TGAGTCTAGC AGTTTTCTTC TGTATCTTGT ACTTTCTTTA CTGACCACTT
GACATAGTAA TTTAGACAGG ATGTTATTAT TTGAATCATA CATATGAAGA GTTAGCTTGC ACTTTCAACC ATGTCCACAA
AAAATTATTT GCTACATTAG GCGTCAAGTA AACATTCTAG GGGAGTTATA TGCTTTGACT GTCGAAATGA TAGCAAGTTA
TCTCATTCAT TTAGAAGAAT GAGTCCTCCA GTGTGTGGTG ATTACAAATA ATTTTGCTCA ATAGGATAAT AAAATGGGGT
GTTCAATTCA AAGCTGGTGT TGCAAGGATG TGAATTTTGA TTTGGGAATT GATGGATATT AACGTAGAAG TCTTGAATTC
AAGATGAAGT TATATCTTTG CATATGCGAT TCACATATTT CAGCCCTAGT TAGGCAAATA CAAG

>Vigan.04G330900.01
ATGGGTCTAG CTTTAACCGT CGGTGTCTTC GGTGTTCTGG TTCTATTTCA CGCCGCTTAT TCAACTATCC ACTACAGGGG
TCTGTTGAAG ATTACAGAGG AGGAGTTTTC AGGGCCTCCA TTTAACGTGG TGATTGAGCT GTTTGTTGGG CTGCTGCTTT
GTTTCTGGGC TGCGCTCACT GTGCCCGGGA ATTTTAAATC CATACTCCCT CACTCCGAGG AGAACAGGAT TGTTTCTTTA
CCTGCCAACC TAGACTTCAT GATCTTCAAT CACCGAGGCA AGGTCTTTCC TGTGGAACTG GATGTGAAGC TGAGACAATG
A

>Vigan.04G330900.01
MGLALTVGVF GVLVLFHAAY STIHYRGLLK ITEEEFSGPP FNVVIELFVG LLLCFWAALT VPGNFKSILP HSEENRIVSL
PANLDFMIFN HRGKVFPVEL DVKLRQ*