GBrowse Details

Vigan.04G340000.01

Basic Information:
Name: Vigan.04G340000.01
Multiple alignment
Variant Information
Position: Chr04:46154895..46159686 (+ strand)
Length: 4792
Functional Information:
Description: Similar to Enolase. [Q6RIB7, Glycine max]
GO: Biological Process: glycolysis (GO:0006096)
Cellular Component: phosphopyruvate hydratase complex (GO:0000015)
Molecular Function: magnesium ion binding (GO:0000287)
Molecular Function: phosphopyruvate hydratase activity (GO:0004634)
InterPro: Enolase (IPR000941)
Enolase, conserved site (IPR020809)
Enolase, C-terminal (IPR020810)
Enolase, N-terminal (IPR020811)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:14.13,86.34,306.49,99.89,512.25,489.66,347.14,153.36
Arabidopsis thaliana homolog: AT1G74030.1, AT2G36530.1
Automatic updates:
Name: NM_001250400 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max enolase (LOC547752), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr04:46154895..46155118 (+ strand)
Length: 224
Type: five_prime_UTR
Position: Chr04:46155119..46155184 (+ strand)
Length: 66
Type: CDS
Position: Chr04:46155457..46155520 (+ strand)
Length: 64
Type: CDS
Position: Chr04:46155785..46155849 (+ strand)
Length: 65
Type: CDS
Position: Chr04:46155948..46155995 (+ strand)
Length: 48
Type: CDS
Position: Chr04:46156189..46156275 (+ strand)
Length: 87
Type: CDS
Position: Chr04:46156356..46156436 (+ strand)
Length: 81
Type: CDS
Position: Chr04:46156767..46156868 (+ strand)
Length: 102
Type: CDS
Position: Chr04:46156951..46157031 (+ strand)
Length: 81
Type: CDS
Position: Chr04:46157185..46157259 (+ strand)
Length: 75
Type: CDS
Position: Chr04:46157358..46157420 (+ strand)
Length: 63
Type: CDS
Position: Chr04:46157516..46157593 (+ strand)
Length: 78
Type: CDS
Position: Chr04:46158361..46158555 (+ strand)
Length: 195
Type: CDS
Position: Chr04:46158668..46158718 (+ strand)
Length: 51
Type: CDS
Position: Chr04:46158817..46158905 (+ strand)
Length: 89
Type: CDS
Position: Chr04:46159075..46159126 (+ strand)
Length: 52
Type: CDS
Position: Chr04:46159211..46159267 (+ strand)
Length: 57
Type: CDS
Position: Chr04:46159342..46159422 (+ strand)
Length: 81
Type: CDS
Position: Chr04:46159423..46159686 (+ strand)
Length: 264
Type: three_prime_UTR


>Vigan.04G340000.01
TAAAAAGGTT AAATACAATG AATAATTAAG GTGTGGAAAA GTTGTTTTTC CTTAAGTGAC ATGTGACTAA CAAGAAGCAT
CACAGGAAGT TTAAGCTTGG TAAACCTAAA AGTGAGCCAG GCATAGTTGG GGGATATAAA TAAACCCACA CACCACTCAG
GCCTCCTCAA ACTCTACTTC TTTTTCCCAA CAACTCACTC CAGATCTCAC TCTAATCGCA ATCCATGGCA ACCATCCTGA
GCATCAAGGC CCGTGAGATC TTTGACAGTC GTGGCAATCC AACCGTAGAG GTTGATTTGC TATGCTCCGA TGGTACTTTT
GCTAGAGCTG CTGTTCCAAG TGGTGCATCC ACTGGGATTT ACGAGGCACT TGAATTGAGA GATGGCGGGT CCGACTACCT
CGGAAAGGGT GTATCAAAGG CTGTTGACAA CGTGAACAGC ATCATTGCCC CTGCATTGAT TGGCAAGGAC CCAACTCAGC
AGACAGCTAT TGACAACTTA ATGGTTCAAC AGCTTGATGG AACTGTTAAC GAATGGGGTT GGTGCAAGCA AAAGCTTGGA
GCAAATGCCA TATTGGCAGT GTCTCTTGCA GTCTGCAAAG CTGGTGCCAG CGTCCTGAAA ATTCCTCTTT ACAAGCATAT
TGCAAATCTT GCTGGTAACA AAAATTTGGT TTTGCCTGTT CCTGCTTTCA ACGTCATTAA TGGTGGATCA CATGCTGGAA
ACAAACTTGC TATGCAGGAG TTTATGGTTC TTCCCGTGGG TGCTTCCTCT TTCAAGGAAG CCATGAAGAT GGGGGTGGAA
GTATATCATC ATTTGAAGTC TGTGATTAAG AAGAAATACG GACAAGATGC AATAAATGTT GGTGACGAAG GTGGCTTTGC
TCCAAACATT CAGGAAAACA AGGAAGGTTT GGAATTGCTC AACTCTGCCA TTGCCAAAGC TGGCTACACA GGAAAAGTTG
TCATTGGAAT GGATGTTGCT GCTTCCGAAT TCTACAAGGA GGACAAAACA TACGATTTGA ACTTCAAGGA AGATGACAAC
GATGGCTCAC AGAGGATCTC TGGCGATGCT TTGAAAGAAC TGTACAAGTC ATTTGTGTCA GAGTACCCAA TTGTATCAAT
TGAGGATCCT TTTGACCAGG ATGACTGGGA GCACTATGCT AAGCTGACTG CTGAGGTTGG AACCAACGTA CAAATTGTTG
GTGATGATCT GTTGGTTACC AACCCTAAGA GGGTTCAGAA AGCAATCGAT ACCAAAGCAT GCAATGCTCT TCTCCTCAAG
GTCAATCAAA TTGGTTCTGT GACGGAGAGT ATTGAAGCTG TTAGGATGTC CAAAAAAGCT GGATGGGGTG TCATGACCAG
TCACAGAAGT GGAGAAACTG AGGATACATT CATTGCTGAC CTTGCTGTTG GTTTGTCAAC GGGTCAAATT AAGACTGGAG
CTCCATGCAG ATCAGAGCGT CTTGCTAAAT ATAACCAGCT CTTGAGAATT GAGGAGGAGC TTGGTGCTGA AGCAGTGTAT
GCTGGAGCTA ACTTCCGTAC CCCTGTTGAA CCATACTAGA GTTTTGAAGT GGAAAAAACC TGGAGACCCA GAGTTTTGAA
CAGTGAGATT TGATCTTGCG GTTGTGATGA ATAAGTTAGT TAGAATAATT GTCGGTATAA AGACCTTGTC AATAATTTTG
AGTTCTGAGT CACAGAGCTG ATAATTCCGT GTTTAAACTT TAAAAGGTGT TTTTAATTAT ATTTAGTTTT AATGCTTGAA
TCCTACTTTC AGTTTAGTTC CAATTTTATG GGTTATCTAA AAATGCTTCT TTGCGAAGTT ACT

>Vigan.04G340000.01
ATGGCAACCA TCCTGAGCAT CAAGGCCCGT GAGATCTTTG ACAGTCGTGG CAATCCAACC GTAGAGGTTG ATTTGCTATG
CTCCGATGGT ACTTTTGCTA GAGCTGCTGT TCCAAGTGGT GCATCCACTG GGATTTACGA GGCACTTGAA TTGAGAGATG
GCGGGTCCGA CTACCTCGGA AAGGGTGTAT CAAAGGCTGT TGACAACGTG AACAGCATCA TTGCCCCTGC ATTGATTGGC
AAGGACCCAA CTCAGCAGAC AGCTATTGAC AACTTAATGG TTCAACAGCT TGATGGAACT GTTAACGAAT GGGGTTGGTG
CAAGCAAAAG CTTGGAGCAA ATGCCATATT GGCAGTGTCT CTTGCAGTCT GCAAAGCTGG TGCCAGCGTC CTGAAAATTC
CTCTTTACAA GCATATTGCA AATCTTGCTG GTAACAAAAA TTTGGTTTTG CCTGTTCCTG CTTTCAACGT CATTAATGGT
GGATCACATG CTGGAAACAA ACTTGCTATG CAGGAGTTTA TGGTTCTTCC CGTGGGTGCT TCCTCTTTCA AGGAAGCCAT
GAAGATGGGG GTGGAAGTAT ATCATCATTT GAAGTCTGTG ATTAAGAAGA AATACGGACA AGATGCAATA AATGTTGGTG
ACGAAGGTGG CTTTGCTCCA AACATTCAGG AAAACAAGGA AGGTTTGGAA TTGCTCAACT CTGCCATTGC CAAAGCTGGC
TACACAGGAA AAGTTGTCAT TGGAATGGAT GTTGCTGCTT CCGAATTCTA CAAGGAGGAC AAAACATACG ATTTGAACTT
CAAGGAAGAT GACAACGATG GCTCACAGAG GATCTCTGGC GATGCTTTGA AAGAACTGTA CAAGTCATTT GTGTCAGAGT
ACCCAATTGT ATCAATTGAG GATCCTTTTG ACCAGGATGA CTGGGAGCAC TATGCTAAGC TGACTGCTGA GGTTGGAACC
AACGTACAAA TTGTTGGTGA TGATCTGTTG GTTACCAACC CTAAGAGGGT TCAGAAAGCA ATCGATACCA AAGCATGCAA
TGCTCTTCTC CTCAAGGTCA ATCAAATTGG TTCTGTGACG GAGAGTATTG AAGCTGTTAG GATGTCCAAA AAAGCTGGAT
GGGGTGTCAT GACCAGTCAC AGAAGTGGAG AAACTGAGGA TACATTCATT GCTGACCTTG CTGTTGGTTT GTCAACGGGT
CAAATTAAGA CTGGAGCTCC ATGCAGATCA GAGCGTCTTG CTAAATATAA CCAGCTCTTG AGAATTGAGG AGGAGCTTGG
TGCTGAAGCA GTGTATGCTG GAGCTAACTT CCGTACCCCT GTTGAACCAT ACTAG

>Vigan.04G340000.01
MATILSIKAR EIFDSRGNPT VEVDLLCSDG TFARAAVPSG ASTGIYEALE LRDGGSDYLG KGVSKAVDNV NSIIAPALIG
KDPTQQTAID NLMVQQLDGT VNEWGWCKQK LGANAILAVS LAVCKAGASV LKIPLYKHIA NLAGNKNLVL PVPAFNVING
GSHAGNKLAM QEFMVLPVGA SSFKEAMKMG VEVYHHLKSV IKKKYGQDAI NVGDEGGFAP NIQENKEGLE LLNSAIAKAG
YTGKVVIGMD VAASEFYKED KTYDLNFKED DNDGSQRISG DALKELYKSF VSEYPIVSIE DPFDQDDWEH YAKLTAEVGT
NVQIVGDDLL VTNPKRVQKA IDTKACNALL LKVNQIGSVT ESIEAVRMSK KAGWGVMTSH RSGETEDTFI ADLAVGLSTG
QIKTGAPCRS ERLAKYNQLL RIEEELGAEA VYAGANFRTP VEPY*