GBrowse Details

Vigan.04G366100.01

Basic Information:
Name: Vigan.04G366100.01
Multiple alignment
Variant Information
Position: Chr04:48561760..48565099 (+ strand)
Length: 3340
Functional Information:
Description: Similar to Uncharacterized protein. [I1MZD7, Glycine max]
GO: Biological Process: protein phosphorylation (GO:0006468)
Molecular Function: protein kinase activity (GO:0004672)
Molecular Function: protein serine/threonine kinase activity (GO:0004674)
Molecular Function: ATP binding (GO:0005524)
Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772)
InterPro: Protein kinase domain (IPR000719)
Serine/threonine- / dual specificity protein kinase, catalytic domain (IPR002290)
Serine/threonine-protein kinase, active site (IPR008271)
Protein kinase-like domain (IPR011009)
Concanavalin A-like lectin/glucanase, subgroup (IPR013320)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:10.43,8.21,8.74,3.97,10.19,5.54,6.50,8.76
Arabidopsis thaliana homolog: AT1G66460.1, AT5G37790.1
Automatic updates:
Name: NM_001255511 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max proline-rich receptor-like protein kinase PERK13-like (LOC100808074), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr04:48561760..48562057 (+ strand)
Length: 298
Type: five_prime_UTR
Position: Chr04:48562058..48562598 (+ strand)
Length: 541
Type: CDS
Position: Chr04:48562948..48563205 (+ strand)
Length: 258
Type: CDS
Position: Chr04:48563291..48563454 (+ strand)
Length: 164
Type: CDS
Position: Chr04:48563562..48563641 (+ strand)
Length: 80
Type: CDS
Position: Chr04:48563757..48563904 (+ strand)
Length: 148
Type: CDS
Position: Chr04:48564494..48564847 (+ strand)
Length: 354
Type: CDS
Position: Chr04:48564848..48565099 (+ strand)
Length: 252
Type: three_prime_UTR


>Vigan.04G366100.01
AGAAGATTGG TGTGACTGAG GGGTGTTTCA ATATTTTTTG ACCTTCTCCG ACTCTGCAGT AGCAGGCAGC AGCATTACTT
TAAATCCAAT TATTTATACT CACAGCCACC ATGCCTCCTT TCCATTTCTC CATCTTTTAA AAATTCTCCC TCACCCCACA
AGCAAAGCAC CCTTAACCTT TTTCGCTTCA ATTTTTTATT TTTCATTGCT TCCTCTTTTT TCTTTCTCTC TTTTTCTTTC
TCTCTACCCC ATTTTGCTTT TCTGGGTTTC TGTGCTTGTT GTTGGGATCT ATTTCATAAT GGGTTTATCC CAAGGACCCT
GCACTGATTC CAGGGACCTT TCCAATGCAC AAACCTCTTC CCCCTTAGTT GTAGATCACT ACTGTGACTA CAACAAGCTC
AAATTCAGAA CCTTGCTCAG AAAAATGATC TGGGAATTCG GTCTTGCCTG TGTGGCCAAC CCTTCCCGGC GCCGGAGGGG
CTCCGAGAGG GGACTGGGCG ATGGCAAGAA GACGAATTTG GAACACAACA AGGCTTGGTT GCTCGCGGAG TCTGGTGGGT
GTGGAGCAGA ATTGTCCAAT GCTGACCCTC AATCGGTTCA CTCCTCTTTC AGGTTCAGTT TCTGTTCTCA GGTTGAGTTG
GAGTCCCTCA ACATGAGTTC TTCCAGTGCT GCGACCGTTT TGATGGTTAA TTTGGACAAT GGGGTGAGTG AATCTCGCGC
CAAGGAAATC AAATGGAGGA GAATGGAGTC CTTGGAGAAG AGCATATCCC CTGTGGCTCA CTCCTTGATC AGGTTCTGCT
ATGGTGAAAT TCTCTCTGCT ACTAGGAATT TCTCCAAGGG GAGGGTATTG GGGAGAGGGG CATTAAGCTG TGTTTTTAGG
GGGAGAGTTG GCCTTTTGAG GACTGCTGTG GCAATCAAAC GGTTGGACAA GGAAGACAAG GAATCTGCCA AGGCCTTCTG
CAGAGAATTG ATGATTGCTA GTTCTCTTCA CAGTTCAAAT GTCGTTCCCC TTGTGGGTTT TTGTATTGAT CCCGAGGAGG
GTCTGTTTTT GGTGTACAAG TATGTCTCAG GGGGCAGTCT GGAGCGCCAC TTGCATGGAA GGAAGAAGGG TAGTTCACCT
CTTCCTTGGT CTGTGAGGTA CAAAGTTGCA ATTGGGATTG CTGAAGCTGT GGCTTATCTG CATAGTGGGA CTGAAAGATG
TGTTGTGCAT AGAGATATTA AGCCCTCAAA CATTCTGCTT TCTTCAAGGA AGACTCCCAA GCTATGTGAT TTCGGATTAG
CTACATGGAC TTCTGCACCT TCAGTTCCTT TCCTTTGCAA AACCGTCAAA GGAACATTTG GATATTTGGC TCCTGAGTAT
TTCCAACATG GGAAAGTATC GGATAAGACT GATGTATATG CTTTTGGAGT GGTTTTACTG GAACTCATTA CTGGCCGGAA
GCCAATTGAG GCAAGAAGAC CTTCAGGAGA AGAAAACTTG GTGTTATGGG CCAAACCTTT TCTACAGAAA GGGAAAGGTG
CCATTGAAGA GTTGCTTGAT CCTCAACTCA AGTGCAGTCT GAGATTCTCA AATCAAATGG GTAGAATGAT TGAAGCAGCA
GCTGCCTGTG TTACTAATGA AGAATCTCGG AGACCTGGCA TACGTGAGAT TATTGCAATA CTGAAGGGTG AAGAAGAGCC
TCTTTTATCC AGAAGAAAGA AATCCAGTTT TCTTGGAAAT GGATGCGTGA TTGATTGTTA TTCTCAGTTA CAACAAACAA
ATAATGAGAT GAAAAGTCAC TTGGCTTTAG CTATGCTAGG AGTTGCAGAG TTTGAGGATG ATGACTATCT CTATGGTCGA
TAAAACATAT GTTGACAACT CTTCAATAAC CTTTTACTTT TTGTTATGAT TGTGACTAAG AGTGCTAAAG ATTAGATGTG
AGCGAGTTAA AATTGTAAAT AGAAATAGGA GCTTAGATGA AGATTGTGTG TAGATACCTT CCTTTTCCCT TTCCCTTTCC
CTTTTCACAA AGGGTAACCT AATAGATTTT CATTCATGTT GTGAATCATG TTCAATTCAT GTGGGGAAAT TTATGATTTT
CAATTTCATT TAAAG

>Vigan.04G366100.01
ATGGGTTTAT CCCAAGGACC CTGCACTGAT TCCAGGGACC TTTCCAATGC ACAAACCTCT TCCCCCTTAG TTGTAGATCA
CTACTGTGAC TACAACAAGC TCAAATTCAG AACCTTGCTC AGAAAAATGA TCTGGGAATT CGGTCTTGCC TGTGTGGCCA
ACCCTTCCCG GCGCCGGAGG GGCTCCGAGA GGGGACTGGG CGATGGCAAG AAGACGAATT TGGAACACAA CAAGGCTTGG
TTGCTCGCGG AGTCTGGTGG GTGTGGAGCA GAATTGTCCA ATGCTGACCC TCAATCGGTT CACTCCTCTT TCAGGTTCAG
TTTCTGTTCT CAGGTTGAGT TGGAGTCCCT CAACATGAGT TCTTCCAGTG CTGCGACCGT TTTGATGGTT AATTTGGACA
ATGGGGTGAG TGAATCTCGC GCCAAGGAAA TCAAATGGAG GAGAATGGAG TCCTTGGAGA AGAGCATATC CCCTGTGGCT
CACTCCTTGA TCAGGTTCTG CTATGGTGAA ATTCTCTCTG CTACTAGGAA TTTCTCCAAG GGGAGGGTAT TGGGGAGAGG
GGCATTAAGC TGTGTTTTTA GGGGGAGAGT TGGCCTTTTG AGGACTGCTG TGGCAATCAA ACGGTTGGAC AAGGAAGACA
AGGAATCTGC CAAGGCCTTC TGCAGAGAAT TGATGATTGC TAGTTCTCTT CACAGTTCAA ATGTCGTTCC CCTTGTGGGT
TTTTGTATTG ATCCCGAGGA GGGTCTGTTT TTGGTGTACA AGTATGTCTC AGGGGGCAGT CTGGAGCGCC ACTTGCATGG
AAGGAAGAAG GGTAGTTCAC CTCTTCCTTG GTCTGTGAGG TACAAAGTTG CAATTGGGAT TGCTGAAGCT GTGGCTTATC
TGCATAGTGG GACTGAAAGA TGTGTTGTGC ATAGAGATAT TAAGCCCTCA AACATTCTGC TTTCTTCAAG GAAGACTCCC
AAGCTATGTG ATTTCGGATT AGCTACATGG ACTTCTGCAC CTTCAGTTCC TTTCCTTTGC AAAACCGTCA AAGGAACATT
TGGATATTTG GCTCCTGAGT ATTTCCAACA TGGGAAAGTA TCGGATAAGA CTGATGTATA TGCTTTTGGA GTGGTTTTAC
TGGAACTCAT TACTGGCCGG AAGCCAATTG AGGCAAGAAG ACCTTCAGGA GAAGAAAACT TGGTGTTATG GGCCAAACCT
TTTCTACAGA AAGGGAAAGG TGCCATTGAA GAGTTGCTTG ATCCTCAACT CAAGTGCAGT CTGAGATTCT CAAATCAAAT
GGGTAGAATG ATTGAAGCAG CAGCTGCCTG TGTTACTAAT GAAGAATCTC GGAGACCTGG CATACGTGAG ATTATTGCAA
TACTGAAGGG TGAAGAAGAG CCTCTTTTAT CCAGAAGAAA GAAATCCAGT TTTCTTGGAA ATGGATGCGT GATTGATTGT
TATTCTCAGT TACAACAAAC AAATAATGAG ATGAAAAGTC ACTTGGCTTT AGCTATGCTA GGAGTTGCAG AGTTTGAGGA
TGATGACTAT CTCTATGGTC GATAA

>Vigan.04G366100.01
MGLSQGPCTD SRDLSNAQTS SPLVVDHYCD YNKLKFRTLL RKMIWEFGLA CVANPSRRRR GSERGLGDGK KTNLEHNKAW
LLAESGGCGA ELSNADPQSV HSSFRFSFCS QVELESLNMS SSSAATVLMV NLDNGVSESR AKEIKWRRME SLEKSISPVA
HSLIRFCYGE ILSATRNFSK GRVLGRGALS CVFRGRVGLL RTAVAIKRLD KEDKESAKAF CRELMIASSL HSSNVVPLVG
FCIDPEEGLF LVYKYVSGGS LERHLHGRKK GSSPLPWSVR YKVAIGIAEA VAYLHSGTER CVVHRDIKPS NILLSSRKTP
KLCDFGLATW TSAPSVPFLC KTVKGTFGYL APEYFQHGKV SDKTDVYAFG VVLLELITGR KPIEARRPSG EENLVLWAKP
FLQKGKGAIE ELLDPQLKCS LRFSNQMGRM IEAAAACVTN EESRRPGIRE IIAILKGEEE PLLSRRKKSS FLGNGCVIDC
YSQLQQTNNE MKSHLALAML GVAEFEDDDY LYGR*