GBrowse Details

Vigan.04G366700.01

Basic Information:
Name: Vigan.04G366700.01
Multiple alignment
Variant Information
Position: Chr04:48595118..48597432 (+ strand)
Length: 2315
Functional Information:
Description: Similar to ADP-ribosylation factor GTPase-activating protein AGD11-like protein. [T2DLR6, Phaseolus vulgaris]
GO: Molecular Function: protein binding (GO:0005515)
InterPro: C2 domain (IPR000008)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:32.49,5.30,20.22,16.85,12.99,23.65,39.66,14.15
Automatic updates:
Name: NM_001248586 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max protein C2-DOMAIN ABA-RELATED 4-like (LOC100306214), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr04:48595118..48595186 (+ strand)
Length: 69
Type: five_prime_UTR
Position: Chr04:48595187..48595297 (+ strand)
Length: 111
Type: CDS
Position: Chr04:48596344..48596439 (+ strand)
Length: 96
Type: CDS
Position: Chr04:48596771..48597061 (+ strand)
Length: 291
Type: CDS
Position: Chr04:48597062..48597432 (+ strand)
Length: 371
Type: three_prime_UTR


>Vigan.04G366700.01
GGGGTTCCTA TTACCATTTG CTCTGTCTTG AAAAATTCCA TTTTTCTTCT TTTCCTCACA CATTTAGTTA TGGAGGACTT
GCTGGGTCTG TTGAGAATTC ATGTTGAGAA AGGTGTCAAT CTTGCAATCA GGGATGTGGT GAGCAGTGAT CCTTATGTTG
TCATCAAAAT GGGCAAGCAG AAGCTGAAGA CTCGGGTGGT TAAAAAGAAT TTAAATCCTG AATGGAATGA TGACTTGACC
CTGTCTATTT CAGATCCTCA TGCTCCAGTC CATTTACATG TGTATGACAA GGACACATTC AGCTTAGATG ACAAAATGGG
GGATGCTGAT TTTTCCATTG GTCCATTCAT TGAAGCAGTG AAGATGCGCT TGACAGGTCT CCCCAACAAT ACCATAGTTA
CAAAAGTGTT GCCTAGCAGA CAAAACTGCT TAGCTGAAGA GAGTCACATT GTGTGGAAGG ATGGCAAAGT TGTGCAAAAC
CTGGTTCTTA GACTAAGAAA TGTAGAGTGT GGGGAGGTGG AACTCCAGTT GAATTGGATT GACATTCCTG GTTCAAGGCA
TCTCTAGATC ACAGTCCAAG ACTTGGCATA TTGTAAAGTT TAGACTTGCA GCCTCATAAA CCAGCAACAC CTTATGTTTT
ATATTATGCT ATCTTTTACT CTTTCGCACA ACTATGGTGT TGCAATTAGT AGTAATTAGT GAAGAAGAAT GGGAGAGGTT
GTTTCCCTAG CTATAATTTA GAATCATCTC CTAGTTCCGT GTAATAATGT GCAAGAAACG TAGCATATAG ATTTTGCACA
TACTATGTTA GTCGCTAGTC ATATATCAGT TTTTTCTATA TTGATTGTTT GGACATTTAT TGGTACTATA TGGTTTATAT
GATATACTTA GGTAAATCAC ATGCCAATGT TAGAGTAGAA ATATCACCTT TACTTTAT

>Vigan.04G366700.01
ATGGAGGACT TGCTGGGTCT GTTGAGAATT CATGTTGAGA AAGGTGTCAA TCTTGCAATC AGGGATGTGG TGAGCAGTGA
TCCTTATGTT GTCATCAAAA TGGGCAAGCA GAAGCTGAAG ACTCGGGTGG TTAAAAAGAA TTTAAATCCT GAATGGAATG
ATGACTTGAC CCTGTCTATT TCAGATCCTC ATGCTCCAGT CCATTTACAT GTGTATGACA AGGACACATT CAGCTTAGAT
GACAAAATGG GGGATGCTGA TTTTTCCATT GGTCCATTCA TTGAAGCAGT GAAGATGCGC TTGACAGGTC TCCCCAACAA
TACCATAGTT ACAAAAGTGT TGCCTAGCAG ACAAAACTGC TTAGCTGAAG AGAGTCACAT TGTGTGGAAG GATGGCAAAG
TTGTGCAAAA CCTGGTTCTT AGACTAAGAA ATGTAGAGTG TGGGGAGGTG GAACTCCAGT TGAATTGGAT TGACATTCCT
GGTTCAAGGC ATCTCTAG

>Vigan.04G366700.01
MEDLLGLLRI HVEKGVNLAI RDVVSSDPYV VIKMGKQKLK TRVVKKNLNP EWNDDLTLSI SDPHAPVHLH VYDKDTFSLD
DKMGDADFSI GPFIEAVKMR LTGLPNNTIV TKVLPSRQNC LAEESHIVWK DGKVVQNLVL RLRNVECGEV ELQLNWIDIP
GSRHL*