GBrowse Details

Vigan.04G397000.01

Basic Information:
Name: Vigan.04G397000.01
Multiple alignment
Variant Information
Position: Chr04:50990938..50994263 (+ strand)
Length: 3326
Functional Information:
Description: Similar to Wee1. [Q6T2Z4, Glycine max]
GO: Biological Process: protein phosphorylation (GO:0006468)
Molecular Function: protein kinase activity (GO:0004672)
Molecular Function: protein serine/threonine kinase activity (GO:0004674)
Molecular Function: ATP binding (GO:0005524)
Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772)
InterPro: Protein kinase domain (IPR000719)
Serine/threonine- / dual specificity protein kinase, catalytic domain (IPR002290)
Serine/threonine-protein kinase, active site (IPR008271)
Protein kinase-like domain (IPR011009)
Protein kinase, ATP binding site (IPR017441)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.12,3.46,2.28,1.32,5.60,2.18,8.50,2.16
Arabidopsis thaliana homolog: AT1G02970.1
Automatic updates:
Name: NM_001250254 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max wee1 (LOC547742), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr04:50990938..50991012 (+ strand)
Length: 75
Type: five_prime_UTR
Position: Chr04:50991013..50991284 (+ strand)
Length: 272
Type: CDS
Position: Chr04:50991366..50991426 (+ strand)
Length: 61
Type: CDS
Position: Chr04:50991512..50991575 (+ strand)
Length: 64
Type: CDS
Position: Chr04:50991858..50992124 (+ strand)
Length: 267
Type: CDS
Position: Chr04:50992266..50992333 (+ strand)
Length: 68
Type: CDS
Position: Chr04:50992440..50992549 (+ strand)
Length: 110
Type: CDS
Position: Chr04:50992627..50992667 (+ strand)
Length: 41
Type: CDS
Position: Chr04:50992762..50992910 (+ strand)
Length: 149
Type: CDS
Position: Chr04:50993141..50993494 (+ strand)
Length: 354
Type: CDS
Position: Chr04:50993950..50994042 (+ strand)
Length: 93
Type: CDS
Position: Chr04:50994043..50994263 (+ strand)
Length: 221
Type: three_prime_UTR


>Vigan.04G397000.01
TAATATAACT GTGTTTTTTA CTGAAGTAAG CTAAAACTGT GTGATTGATC GTGATCGTGG TGGTGGAAGA CGAAGATGAA
GGGGAAAAGC CACAAGATTG GAAAGAAGCA GAGTAGGAAG ATGAAGGGCG CGTTGACTAA CAGCACCACC AGGCACTTGC
AGCTTCAGCT AGGTCAAGTC TCCCTCATTC CTCTCAACCA ACCATCTTCT ACCACTTCTT CCGATGTTTC TTGCTTCCAG
AACCTTCTGC ATTCCGAACC TCCCAACACG TCTTCATCGC GCGTTCCGCT CACCGACGAT TCCTTCGCCG ACGACAGATA
CTGTATTCTC AGCCAGGACT TCTTCTGCAC TCCGGATTAC ATCACTCCGG ACAATCAGCA TACTTTGAAT GGCTTTGATT
GCGATATGGA TACACCATGC CCCAAATCGC CTGAGAAGCT TAACACTACG AAGAGTAAGA GATGTCGACC AGATGTTATG
TCGGTTCAAC CTCTCAGCCC CACCTTTTCT GGTGACCATC AGCCAGCTGT GGAACTGGGA AAGGATTCTG TTGACGACGA
ATTTGCTTTG GAGAAAACAA TAGCAGCTGC TAAACCAAAG GGTCAGAATT ACGTGTCCCA ATCTGCAATT GCATTGCGTT
TCCGGGTTAT GCCTCCTCCT TGCTTTAGGA ACCCATTTTT AAAAGATGTT ACAGAAAAGG AGATTGATTC TTTTGGAAAC
CAAAGATTGA AATGTGCAGG CCTCTTCCCT GCAATCAGTG GTGGTGACGG GCTTTCACGC TATCGTGCTG ACTTTCATGA
AATTGAGCAA ATTGGTGGAG GGAACTTTAG TCATGTTTTC AAAGTATTAA AACGACTAGA TGGATGTTTG TATGCTGTTA
AACGGAGCAT CAGACCGTTA CGCCTTGAAA CAGAAAGGAC AAAAGCTTTG ATGGAAGTTC AAGCTTTGGC GGCCCTAGGT
TTGCATCAGA ACATCGTGGG CTACTATTCT TCATGGTTTG AAAATGAACA GCTGTACATT CAGATGGAGT TATGTGATCA
CAGCTTATCT ATAAGAAAAT GCCCAGAGGC ATTTACAGAA GCACAAGTGT TAGATGCCTT ATTTCAGGTT GCCAATGCTC
TGCGATTTAT TCACGAGAAG GGAATGGCTC ATCTAGATGT GAAACCCAAT AATATTTATG TGAAGAGTGG TGTTTATAAA
CTCGGTGATT TTGGATGTGC GACTCTTCTT GATAGTAGCC TCCCAATTGA AGAGGGTGAC GCACGTTATA TGCCCCAGGA
AATTCTTAAT GAAAATTATG ATTATCTAGA CAAGGTTGAT ATCTTCTCCT TGGGAGCTTC TATTTATGAA CTAATCCGCA
GATTGCCTTT GCCAGAATCA GGATGTCAAT ATTTTAACCT CAAGGAAGGC AAGTTTCCCC TCTTGCCTGG TCATTCCTTG
CATCTTCAAA ACTTGCTCAA GGTCATGATG GACCCTGATC CGGTTAAGCG GCCTTCTGCT AGAGAATTGG TAGAAAACCC
AATTTTTTGT AAGAAGATTC AAAGAATTGC GTGAAGTTAA CCACGAATTA TTTTTGCTTT TGGGTTGGAT CATACATGAT
CGGTCCTGAT TGTTTCATGG CCAATTTTGT GAAATATCTT TTTCGGATAT ATATATATAT ATATATGCAC CAAACTTTTC
TCGAGAATGG AGCAAAAATT GTAAATTTAA TGGTCTAATG ATTCATTGGA TTGTACTACT GATGTGCAAA TGACAATTGG
CAAATAAAAA CCTTA

>Vigan.04G397000.01
ATGAAGGGGA AAAGCCACAA GATTGGAAAG AAGCAGAGTA GGAAGATGAA GGGCGCGTTG ACTAACAGCA CCACCAGGCA
CTTGCAGCTT CAGCTAGGTC AAGTCTCCCT CATTCCTCTC AACCAACCAT CTTCTACCAC TTCTTCCGAT GTTTCTTGCT
TCCAGAACCT TCTGCATTCC GAACCTCCCA ACACGTCTTC ATCGCGCGTT CCGCTCACCG ACGATTCCTT CGCCGACGAC
AGATACTGTA TTCTCAGCCA GGACTTCTTC TGCACTCCGG ATTACATCAC TCCGGACAAT CAGCATACTT TGAATGGCTT
TGATTGCGAT ATGGATACAC CATGCCCCAA ATCGCCTGAG AAGCTTAACA CTACGAAGAG TAAGAGATGT CGACCAGATG
TTATGTCGGT TCAACCTCTC AGCCCCACCT TTTCTGGTGA CCATCAGCCA GCTGTGGAAC TGGGAAAGGA TTCTGTTGAC
GACGAATTTG CTTTGGAGAA AACAATAGCA GCTGCTAAAC CAAAGGGTCA GAATTACGTG TCCCAATCTG CAATTGCATT
GCGTTTCCGG GTTATGCCTC CTCCTTGCTT TAGGAACCCA TTTTTAAAAG ATGTTACAGA AAAGGAGATT GATTCTTTTG
GAAACCAAAG ATTGAAATGT GCAGGCCTCT TCCCTGCAAT CAGTGGTGGT GACGGGCTTT CACGCTATCG TGCTGACTTT
CATGAAATTG AGCAAATTGG TGGAGGGAAC TTTAGTCATG TTTTCAAAGT ATTAAAACGA CTAGATGGAT GTTTGTATGC
TGTTAAACGG AGCATCAGAC CGTTACGCCT TGAAACAGAA AGGACAAAAG CTTTGATGGA AGTTCAAGCT TTGGCGGCCC
TAGGTTTGCA TCAGAACATC GTGGGCTACT ATTCTTCATG GTTTGAAAAT GAACAGCTGT ACATTCAGAT GGAGTTATGT
GATCACAGCT TATCTATAAG AAAATGCCCA GAGGCATTTA CAGAAGCACA AGTGTTAGAT GCCTTATTTC AGGTTGCCAA
TGCTCTGCGA TTTATTCACG AGAAGGGAAT GGCTCATCTA GATGTGAAAC CCAATAATAT TTATGTGAAG AGTGGTGTTT
ATAAACTCGG TGATTTTGGA TGTGCGACTC TTCTTGATAG TAGCCTCCCA ATTGAAGAGG GTGACGCACG TTATATGCCC
CAGGAAATTC TTAATGAAAA TTATGATTAT CTAGACAAGG TTGATATCTT CTCCTTGGGA GCTTCTATTT ATGAACTAAT
CCGCAGATTG CCTTTGCCAG AATCAGGATG TCAATATTTT AACCTCAAGG AAGGCAAGTT TCCCCTCTTG CCTGGTCATT
CCTTGCATCT TCAAAACTTG CTCAAGGTCA TGATGGACCC TGATCCGGTT AAGCGGCCTT CTGCTAGAGA ATTGGTAGAA
AACCCAATTT TTTGTAAGAA GATTCAAAGA ATTGCGTGA

>Vigan.04G397000.01
MKGKSHKIGK KQSRKMKGAL TNSTTRHLQL QLGQVSLIPL NQPSSTTSSD VSCFQNLLHS EPPNTSSSRV PLTDDSFADD
RYCILSQDFF CTPDYITPDN QHTLNGFDCD MDTPCPKSPE KLNTTKSKRC RPDVMSVQPL SPTFSGDHQP AVELGKDSVD
DEFALEKTIA AAKPKGQNYV SQSAIALRFR VMPPPCFRNP FLKDVTEKEI DSFGNQRLKC AGLFPAISGG DGLSRYRADF
HEIEQIGGGN FSHVFKVLKR LDGCLYAVKR SIRPLRLETE RTKALMEVQA LAALGLHQNI VGYYSSWFEN EQLYIQMELC
DHSLSIRKCP EAFTEAQVLD ALFQVANALR FIHEKGMAHL DVKPNNIYVK SGVYKLGDFG CATLLDSSLP IEEGDARYMP
QEILNENYDY LDKVDIFSLG ASIYELIRRL PLPESGCQYF NLKEGKFPLL PGHSLHLQNL LKVMMDPDPV KRPSARELVE
NPIFCKKIQR IA*