GBrowse Details

Vigan.04G402600.01

Basic Information:
Name: Vigan.04G402600.01
Multiple alignment
Variant Information
Position: Chr04:51425256..51428029 (- strand)
Length: 2774
Functional Information:
Description: Similar to proton-coupled amino acid transporter 3-like isoform X1. [XP_004494293.1, Cicer arietinum]
InterPro: Amino acid transporter, transmembrane (IPR013057)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:11.55,16.92,17.51,10.97,6.29,12.43,11.51,8.98
Arabidopsis thaliana homolog: AT3G11900.1
Structure :
Position: Chr04:51425256..51425372 (- strand)
Length: 117
Type: three_prime_UTR
Position: Chr04:51425373..51425756 (- strand)
Length: 384
Type: CDS
Position: Chr04:51426324..51426971 (- strand)
Length: 648
Type: CDS
Position: Chr04:51427398..51427613 (- strand)
Length: 216
Type: CDS
Position: Chr04:51427614..51428029 (- strand)
Length: 416
Type: five_prime_UTR


>Vigan.04G402600.01
GCGGAGTTGA GTTAGATTTA AAAATAATAA ACTTCGATCT AGCAGAAAAG TTTGAGCTTA GATAATTCTT TCATGTTCTG
GCAAACAGCA AGGTTTCATA AGAACAGAGC TCATTTGGAA GTAGCTTTTA CCACTTCTTA AGGGTTTATT GCGTGTTTTC
TCTGTTGTCG ACCCATCAAA TTGAAACAGA CAACGTTGGG CAACGTTGTC AATGGTCACT CATTCATTAT TTATAGATTC
ATCACCAACA ACTTCGGTTC CTAACTAGCC CTTTTGGATT TTTCGTTCTC CTCGCTGTAA CGACCCGTCC CCTGTCATCT
TGTCTCTGAC AGGAGCGGCA CGTGTCCCGC ATGGTGAACT CGTTTTCAGT CACTCGTTAA GACTCTGGGT AGATCGCGTA
CATACAGGGA AGAAACATGG AGCGGGAGAA AACAAACATG GCATCTCCTC TGCTGGAGCC TTCGCCTTCA AAGAGGGCTT
CCAAGCTTCA AACTTTGGGA AACATCATAG TCACTGTTGT CGGAACTGGA GTTCTTGGAT TACCCTTTGC TTTTCGGATC
GCTGGGTGGG TCGCTGGCTC GCTTGGGGTT GCTGTTGTCG GCTTATCCAC TTACTATTGC ATGGTTCTTC TTGTTAATTG
CAGAGACAAA TTGGCGTCTG AAGAGCCACT GGGGGAATCA AACACATATG GAGACTTGGG TTATAGGTCT TTTGGAACCC
TAGGTCGGTT TGTGACAGAA GTTATAATTG TGGTAGCACA ATGTGCTGGA TCTATTGCTT ATTTTGTGTT TATTGGACAA
AACCTTCATT CTGTATTTGA AGGCCAGAAC ATATCAATGG CCTCCTTCAT ATTTATGTTG GTACCTGTTG AGATTGGATT
GGCTTGGATA GGGAGCTTAT CTGCTTTGGC ACCTTTCAGC ATTTTTGCTG ATGTTTGCAA TGTCTTGGCT ATGGGAATTG
TGGTGAAGGA GGACGTACAA CGGGCCTTCG GGGAGGGGTT TTCATTTGGA GAAAGGACAG CAATCACATC CAACATTGGG
GGATTGCCAT TTGCAGCAGG CATGGCAGTG TTTTGTTTTG AGGGGTTTGG AATGACACTG GCTCTAGAGA ATTCTATGCA
GGATAAACGT AAGTTCCCAA TATTGCTTGC TCAGACTTTT GGTGGGATAA CTCTTGTGTA CATTCTTTTT GGTTTTTGTG
GTTACATGGC TTTTGGTGAA GAAACCAGAG ACATTGTGAC CCTCAATCTC CCAAGGAATT GGTCATCTCT TTCAGTGCAG
GTAGGATTAT GTGTTGGGCT TGCATTCACA CTTCCAATCA TGTTACACCC AATTAATGAG ATTGTGGAAG GGAAACTCAA
AATCATTTTC AGAAACAACA ATGATTCAAC GGGACCAGGA AATATCTGCA TATGCATCAG CCGAGCGATT GTGGTGGTTG
GACTGGCAGT GATAGCTTCA TTCGTGCCAG AATTTGGTGT ATTTGCCTCA TTTGTGGGGA GTACCTTATG TGCAATGCTC
TCATTTGTTT TGCCAGCCAC ATTTCACCTA AAGCTACTTG GCTCTTCTCT ACCCTTCTGG CGTAAAGCCT TAGATTTTAT
TGTATTATTT TCTGGATTAT TTTTTGCCAT TTATGGAACT TACAACACAA TAGTTGGAGT TTGATGTATA AACATGTATT
TTACTTAGTA GAACCTTCTG CACAACTCAA TTCATTGTTT TTAAGCGTTA GAACTTACTG TAAAGCAAGC CCGCACAATC
GTCTGATTCA GAGTTCTCGA G

>Vigan.04G402600.01
ATGGAGCGGG AGAAAACAAA CATGGCATCT CCTCTGCTGG AGCCTTCGCC TTCAAAGAGG GCTTCCAAGC TTCAAACTTT
GGGAAACATC ATAGTCACTG TTGTCGGAAC TGGAGTTCTT GGATTACCCT TTGCTTTTCG GATCGCTGGG TGGGTCGCTG
GCTCGCTTGG GGTTGCTGTT GTCGGCTTAT CCACTTACTA TTGCATGGTT CTTCTTGTTA ATTGCAGAGA CAAATTGGCG
TCTGAAGAGC CACTGGGGGA ATCAAACACA TATGGAGACT TGGGTTATAG GTCTTTTGGA ACCCTAGGTC GGTTTGTGAC
AGAAGTTATA ATTGTGGTAG CACAATGTGC TGGATCTATT GCTTATTTTG TGTTTATTGG ACAAAACCTT CATTCTGTAT
TTGAAGGCCA GAACATATCA ATGGCCTCCT TCATATTTAT GTTGGTACCT GTTGAGATTG GATTGGCTTG GATAGGGAGC
TTATCTGCTT TGGCACCTTT CAGCATTTTT GCTGATGTTT GCAATGTCTT GGCTATGGGA ATTGTGGTGA AGGAGGACGT
ACAACGGGCC TTCGGGGAGG GGTTTTCATT TGGAGAAAGG ACAGCAATCA CATCCAACAT TGGGGGATTG CCATTTGCAG
CAGGCATGGC AGTGTTTTGT TTTGAGGGGT TTGGAATGAC ACTGGCTCTA GAGAATTCTA TGCAGGATAA ACGTAAGTTC
CCAATATTGC TTGCTCAGAC TTTTGGTGGG ATAACTCTTG TGTACATTCT TTTTGGTTTT TGTGGTTACA TGGCTTTTGG
TGAAGAAACC AGAGACATTG TGACCCTCAA TCTCCCAAGG AATTGGTCAT CTCTTTCAGT GCAGGTAGGA TTATGTGTTG
GGCTTGCATT CACACTTCCA ATCATGTTAC ACCCAATTAA TGAGATTGTG GAAGGGAAAC TCAAAATCAT TTTCAGAAAC
AACAATGATT CAACGGGACC AGGAAATATC TGCATATGCA TCAGCCGAGC GATTGTGGTG GTTGGACTGG CAGTGATAGC
TTCATTCGTG CCAGAATTTG GTGTATTTGC CTCATTTGTG GGGAGTACCT TATGTGCAAT GCTCTCATTT GTTTTGCCAG
CCACATTTCA CCTAAAGCTA CTTGGCTCTT CTCTACCCTT CTGGCGTAAA GCCTTAGATT TTATTGTATT ATTTTCTGGA
TTATTTTTTG CCATTTATGG AACTTACAAC ACAATAGTTG GAGTTTGA

>Vigan.04G402600.01
MEREKTNMAS PLLEPSPSKR ASKLQTLGNI IVTVVGTGVL GLPFAFRIAG WVAGSLGVAV VGLSTYYCMV LLVNCRDKLA
SEEPLGESNT YGDLGYRSFG TLGRFVTEVI IVVAQCAGSI AYFVFIGQNL HSVFEGQNIS MASFIFMLVP VEIGLAWIGS
LSALAPFSIF ADVCNVLAMG IVVKEDVQRA FGEGFSFGER TAITSNIGGL PFAAGMAVFC FEGFGMTLAL ENSMQDKRKF
PILLAQTFGG ITLVYILFGF CGYMAFGEET RDIVTLNLPR NWSSLSVQVG LCVGLAFTLP IMLHPINEIV EGKLKIIFRN
NNDSTGPGNI CICISRAIVV VGLAVIASFV PEFGVFASFV GSTLCAMLSF VLPATFHLKL LGSSLPFWRK ALDFIVLFSG
LFFAIYGTYN TIVGV*