GBrowse Details

Vigan.04G416400.01

Basic Information:
Name: Vigan.04G416400.01
Multiple alignment
Variant Information
Position: Chr04:52542207..52543402 (+ strand)
Length: 1196
Functional Information:
Description: Similar to Uncharacterized protein. [I1MYU7, Glycine max]
GO: Biological Process: metal ion transport (GO:0030001)
Molecular Function: metal ion binding (GO:0046872)
InterPro: Heavy metal-associated domain, HMA (IPR006121)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.00,0.03,0.60,6.91,0.44,0.00,0.07,30.83
Automatic updates:
Name: NM_001254159 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100778653 (LOC100778653), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr04:52542207..52542654 (+ strand)
Length: 448
Type: five_prime_UTR
Position: Chr04:52542655..52542817 (+ strand)
Length: 163
Type: CDS
Position: Chr04:52542906..52543204 (+ strand)
Length: 299
Type: CDS
Position: Chr04:52543205..52543402 (+ strand)
Length: 198
Type: three_prime_UTR


>Vigan.04G416400.01
TTTCTTCTTA TCTGCTTTCT TCAACCCCAC GTCATTTTTT TCTCCATTCA CAAGTTAAAA CCCATTTTAA GGTTCTTGTT
CCACTACTGC CGTAGGTACG TAGGCTCACT CACCTTTCCA TTCATACATA CATATAATTC AATCTGCTGC TCAAAGGCTT
TCAAATAATT ACATGGCCCG TGGTAAAAAT ATCTCTAAGG TTATAATAAG TAAAAAAAAG TTCTTCATTT TGGATCATTA
GAAGGTAAGT AAGGAATCTT TTTCTGTTTT TCAACAAAGT TCTTTGTAAC TTCTTCTGCT TTTCGTCCTT TTGCTTTTCC
TATATATACT CTTATAGTCT ACTTTCATCT CCAACACCAT CAAACTTCAA CCCTTCTCCT ACCCACTCAA GAACTTCAAA
CCTTGCTTTC ATATCCATTG GCAAGGTTTT GAGGCTAAAT ACATATCAAT GGGAGTTGGA GATTACTTGT CTGATCTAAT
GGGCACTGGT AGTGGAAGCC GCCAACACAG CAGCAATAGC AGAAAGCAAT TGCAGACCGT AGAGCTGAGG GTGACGATGG
ATTGTGATGG CTGTGTGCTC AAGGTTAAGA AAACTCTCTC TTCGTTAGAT GGAGTAGAAT CAGTGGAGAT AAACAGGAAA
CAGCAGAAAG TGACGGTGAC TGGTTATGTG GAAGCAAACA AGGTGCTAAA GAAGGCGAAG TCAATAGGGA AGAAGGCTGA
GATATGGCCT TACGTGCCTT ACAGCATGGT GGCAAATCCT TATACTGTTC AAGCTTATGA CAGGAAGGCT CCTCCGGGTT
ACGTGAGGAG AGTGGACAAC TCTGCCACCA TTGGAACAGT GACAACTTAT GGAGATCCAT ACACCACCAT GTTCAGTGAT
GAAAACCCAA ATGCATGTTC CATCATCTAG AAACTGGACA GAGACAGAGA CAGAGAGATT ATGTTATAAA CAAGTGCTCT
TTTACTGTTT TTCACACGGC ACTGTATATT TTCAACTTTT AAATATAGTT TGCTTTAGTT TCAATCTTAT ATATGGTGTG
TAGTAATGTG AAGAGATGTT CTTGTGATCC TTTGTTTTTG TTAACTATTT TGTTTCAGTC AATACACT

>Vigan.04G416400.01
ATGGGAGTTG GAGATTACTT GTCTGATCTA ATGGGCACTG GTAGTGGAAG CCGCCAACAC AGCAGCAATA GCAGAAAGCA
ATTGCAGACC GTAGAGCTGA GGGTGACGAT GGATTGTGAT GGCTGTGTGC TCAAGGTTAA GAAAACTCTC TCTTCGTTAG
ATGGAGTAGA ATCAGTGGAG ATAAACAGGA AACAGCAGAA AGTGACGGTG ACTGGTTATG TGGAAGCAAA CAAGGTGCTA
AAGAAGGCGA AGTCAATAGG GAAGAAGGCT GAGATATGGC CTTACGTGCC TTACAGCATG GTGGCAAATC CTTATACTGT
TCAAGCTTAT GACAGGAAGG CTCCTCCGGG TTACGTGAGG AGAGTGGACA ACTCTGCCAC CATTGGAACA GTGACAACTT
ATGGAGATCC ATACACCACC ATGTTCAGTG ATGAAAACCC AAATGCATGT TCCATCATCT AG

>Vigan.04G416400.01
MGVGDYLSDL MGTGSGSRQH SSNSRKQLQT VELRVTMDCD GCVLKVKKTL SSLDGVESVE INRKQQKVTV TGYVEANKVL
KKAKSIGKKA EIWPYVPYSM VANPYTVQAY DRKAPPGYVR RVDNSATIGT VTTYGDPYTT MFSDENPNAC SII*