GBrowse Details

Vigan.05G016900.01

Basic Information:
Name: Vigan.05G016900.01
Multiple alignment
Variant Information
Position: Chr05:1076556..1089780 (+ strand)
Length: 13225
Functional Information:
Description: Similar to Uncharacterized protein. [I1KUF0, Glycine max]
GO: Biological Process: protein phosphorylation (GO:0006468)
Molecular Function: protein kinase activity (GO:0004672)
Molecular Function: protein serine/threonine kinase activity (GO:0004674)
Molecular Function: protein binding (GO:0005515)
Molecular Function: ATP binding (GO:0005524)
Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772)
InterPro: Protein kinase domain (IPR000719)
Leucine-rich repeat (IPR001611)
Serine/threonine- / dual specificity protein kinase, catalytic domain (IPR002290)
Serine/threonine-protein kinase, active site (IPR008271)
Protein kinase-like domain (IPR011009)
Leucine-rich repeat-containing N-terminal, type 2 (IPR013210)
Concanavalin A-like lectin/glucanase, subgroup (IPR013320)
Protein kinase, ATP binding site (IPR017441)
Leucine rich repeat 4 (IPR025875)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:32.53,14.20,13.79,17.64,11.27,14.64,50.87,14.28
Arabidopsis thaliana homolog: AT1G34210.1, AT1G60800.1, AT1G71830.1, AT2G13790.1, AT2G13800.1, AT3G25560.3, AT4G33430.2, AT5G10290.1, AT5G16000.1, AT5G65240.2
Automatic updates:
Name: MN076319 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max BAK2 (BAK2) mRNA, complete cds.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr05:1076556..1077086 (+ strand)
Length: 531
Type: five_prime_UTR
Position: Chr05:1077087..1077180 (+ strand)
Length: 94
Type: CDS
Position: Chr05:1077871..1078003 (+ strand)
Length: 133
Type: CDS
Position: Chr05:1078083..1078154 (+ strand)
Length: 72
Type: CDS
Position: Chr05:1084289..1084432 (+ strand)
Length: 144
Type: CDS
Position: Chr05:1086288..1086359 (+ strand)
Length: 72
Type: CDS
Position: Chr05:1086477..1086548 (+ strand)
Length: 72
Type: CDS
Position: Chr05:1086635..1086714 (+ strand)
Length: 80
Type: CDS
Position: Chr05:1087433..1087561 (+ strand)
Length: 129
Type: CDS
Position: Chr05:1087660..1088001 (+ strand)
Length: 342
Type: CDS
Position: Chr05:1088300..1088694 (+ strand)
Length: 395
Type: CDS
Position: Chr05:1089103..1089423 (+ strand)
Length: 321
Type: CDS
Position: Chr05:1089424..1089780 (+ strand)
Length: 357
Type: three_prime_UTR


>Vigan.05G016900.01
CCAACTTTCT TATTTATTAC CGTTCCAAAT ACCAAACTCT CTCTCTCTCT CTTCTTAGCA TTTTTCAGCT GAATTTTACT
TTCTAATCAC AGTTCATACT TCATAATTCA TATTCATGTA AATAAAACAA AGAAAAACCG TAATAGTATA ATTTTTAAAA
TTAAAAAAGA AGAAAAGAAT AATTAGAATA GAAGCAGCAA TTTCTCAACA AAGGATGCAA CATTCGTTGA CTTGAGCTTT
CTCTTTTCCT CGACCCTTCT CTCTCAAAGC CGTTCTGTGC ATTTTCTGCT AAACCTGCGC ACACCCAATT GGGATTTTAG
CTCCAGATTC CAAGGCAAGA GTAGAAAGTG GAGAAAGAAG AGGACTTGAA GCTGCCCACA GTACGATTTT GGGTTGGCCA
ACAAGGTTAA GATGTTTCTG AGCTTGATGG GTGTCATGTA GATCAAGAGG GGCGTGCGGT TTAGGGAAGC AATTGTTTAT
GAAGGCTTGG TTATTATCAC AAAGGTCAAT TGTTTATGAA GTTGAAGAGG CATGGAGAGA GTAAATTCAT CTTTTATGAC
TTCCTTTTTT GTTTGGGCAA TTTTGGTGCT TGATTTGGTA CTTAAGGCTT CTGGCAATCA GGAAGGCGAT GCCCTGAATG
CATTGAAGAG CAGCTTGCTT GATCCTAACA ATGTTCTTCA AAGCTGGGAT GCTACTCTTG TCAATCCCTG CACTTGGTTT
CATGTTACGT GCAATAGTGA TAACAGTGTG ACCCGTGTTG ATCTTGGAAA TGCAGACCTT TCTGGTCAAC TGGTTTCACA
ACTTGGTCAG CTCACTAATT TACAGTACTT GGAACTTTAT AGTAATAATA TATCTGGAAA AATTCCAGAG GAGCTTGGGA
ACTTGACAAA CTTGGTGAGC TTGGATCTGT ACTTGAACAA TTTAACTGGT TCTATACCAA CTACGCTGGG CAACCTTGCA
AAACTACGTT TCCTGCGTCT CAACAATAAT ACCTTGACAG GAGGCATACC CATGACTTTG ACAAATGTTT CTTCTCTGCA
AGTTCTTGAT CTCTCGAACA ACCATCTAAC AGGGAATATC CCAGTGAATG GTTCATTTTC ATTGTTTACC CCCATCAGTT
ATCAAAATAA TTCTGGCTTG ATACAGCCAA AAAACGTTCC ATCTCCAGCT TCTCCAACTC CACCACCAGC TTCTTCAGGA
AATAGTAACA CTGGAGCTAT TGCTGGAGGA GTTGCTGCTG GTGCTGCTCT GTTGTTTGCA GCCCCTGCAA TTGCACTTGC
TTATTGGCGA AGAAGGAAAC CTCAGGATCA TTTCTTTGAT GTTCCTGCTG AGGAGGATCC TGAAGTTCAC CTTGGTCAAC
TTAAAAGGTT TTCGCTACGT GAGCTGCAAG TTGCCACTGA TAACTTTAGT AACAAACACA TTCTGGGTAG AGGTGGATTT
GGAAAGGTTT ATAAAGGACG CTTAGCTGAT GGATCTCTTG TGGCAGTGAA AAGGCTTAAA GAGGAACGTA CGCAGGGTGG
GGAGCTCCAA TTTCAAACTG AAGTGGAAAT GATCAGCATG GCTGTGCATC GTAATTTGCT TCGGCTTCGT GGTTTCTGTA
TGACACCTAC TGAACGATTG CTTGTGTATC CTTTCATGGC TAATGGAAGT GTAGCATCAT GTTTACGAGA ACGTCAAGAG
GCTCAACCAC CACTTGGTTG GCCAGAACGG AAGCGTATTG CTCTGGGTTC TGCGAGGGGG CTTGCTTATT TACATGATCA
TTGTGACCCT AAGATTATTC ATCGTGATGT CAAAGCAGCA AATATTTTGT TGGATGAGGA ATTTGAAGCA GTTGTTGGAG
ATTTTGGTCT AGCAAAACTT ATGGATTATA AAGATACTCA CGTTACTACT GCTGTACGTG GAACAATTGG ACATATAGCG
CCTGAGTACC TTTCAACTGG AAAGTCTTCA GAGAAGACTG ATGTTTTTGG ATATGGTGTG ATGCTTCTTG AACTCATAAC
TGGACAAAGG GCTTTCGATC TAGCTCGACT TGCCAATGAT GACGATGTCA TGTTGCTTGA TTGGGTTAAA GGACTTCTCA
AAGACAGGAA ATTGGAAACA CTGGTAGATG CAGATTTACA GGGCAATTAT ATTGATGAGG AGGTAGAGCA ATTAATCCAA
GTGGCACTGC TATGCACACA GGGCTCTCCT ATGGAAAGAC CAAAGATGTC TGAAGTGGTC AGAATGCTAG AAGGTGATGG
TTTGGCTGAG AAATGGGAGC AATGGCAGAA AGACGAGACC TTCCGGCAAG ACTTCAACAA CAACATTCAT CACCCTAATG
CAGCAAATTG GATAGTAGAT TCAACTTCCC ACATCCAACC AGATGAACTG TCAGGTCCTA GATGATCCAC ATTCTATGAA
CAAGTGAATA CACAATTCTG CCTGACTAGG CTTTCTGTTG GAAAGGGACA TACTTCTGAT TTGTGCATAT GATTTTCACC
CCTTCTACCT ACCTCTTCTC TTGTTTTCAT CCTTTTGAAA TTATCTTCTG TGCTCAGATT ACATGCCCAT TGATCATGTT
GTGATTATTA AAGGAAGAAG TTTGTAATTT CTATTGGGTT ATCAAGTTGC AGAATGAAGT GTATGTTACA AGCAACTTTT
GTCATTGTAT GTATGAGAAA TTAGAATAGA TCTTTATGGA AATAAATGAA ATTCTATTAT CAATTTCAGA CAAGAATATT
ATTTCAGTAG TTTATTGAGG GG

>Vigan.05G016900.01
ATGGAGAGAG TAAATTCATC TTTTATGACT TCCTTTTTTG TTTGGGCAAT TTTGGTGCTT GATTTGGTAC TTAAGGCTTC
TGGCAATCAG GAAGGCGATG CCCTGAATGC ATTGAAGAGC AGCTTGCTTG ATCCTAACAA TGTTCTTCAA AGCTGGGATG
CTACTCTTGT CAATCCCTGC ACTTGGTTTC ATGTTACGTG CAATAGTGAT AACAGTGTGA CCCGTGTTGA TCTTGGAAAT
GCAGACCTTT CTGGTCAACT GGTTTCACAA CTTGGTCAGC TCACTAATTT ACAGTACTTG GAACTTTATA GTAATAATAT
ATCTGGAAAA ATTCCAGAGG AGCTTGGGAA CTTGACAAAC TTGGTGAGCT TGGATCTGTA CTTGAACAAT TTAACTGGTT
CTATACCAAC TACGCTGGGC AACCTTGCAA AACTACGTTT CCTGCGTCTC AACAATAATA CCTTGACAGG AGGCATACCC
ATGACTTTGA CAAATGTTTC TTCTCTGCAA GTTCTTGATC TCTCGAACAA CCATCTAACA GGGAATATCC CAGTGAATGG
TTCATTTTCA TTGTTTACCC CCATCAGTTA TCAAAATAAT TCTGGCTTGA TACAGCCAAA AAACGTTCCA TCTCCAGCTT
CTCCAACTCC ACCACCAGCT TCTTCAGGAA ATAGTAACAC TGGAGCTATT GCTGGAGGAG TTGCTGCTGG TGCTGCTCTG
TTGTTTGCAG CCCCTGCAAT TGCACTTGCT TATTGGCGAA GAAGGAAACC TCAGGATCAT TTCTTTGATG TTCCTGCTGA
GGAGGATCCT GAAGTTCACC TTGGTCAACT TAAAAGGTTT TCGCTACGTG AGCTGCAAGT TGCCACTGAT AACTTTAGTA
ACAAACACAT TCTGGGTAGA GGTGGATTTG GAAAGGTTTA TAAAGGACGC TTAGCTGATG GATCTCTTGT GGCAGTGAAA
AGGCTTAAAG AGGAACGTAC GCAGGGTGGG GAGCTCCAAT TTCAAACTGA AGTGGAAATG ATCAGCATGG CTGTGCATCG
TAATTTGCTT CGGCTTCGTG GTTTCTGTAT GACACCTACT GAACGATTGC TTGTGTATCC TTTCATGGCT AATGGAAGTG
TAGCATCATG TTTACGAGAA CGTCAAGAGG CTCAACCACC ACTTGGTTGG CCAGAACGGA AGCGTATTGC TCTGGGTTCT
GCGAGGGGGC TTGCTTATTT ACATGATCAT TGTGACCCTA AGATTATTCA TCGTGATGTC AAAGCAGCAA ATATTTTGTT
GGATGAGGAA TTTGAAGCAG TTGTTGGAGA TTTTGGTCTA GCAAAACTTA TGGATTATAA AGATACTCAC GTTACTACTG
CTGTACGTGG AACAATTGGA CATATAGCGC CTGAGTACCT TTCAACTGGA AAGTCTTCAG AGAAGACTGA TGTTTTTGGA
TATGGTGTGA TGCTTCTTGA ACTCATAACT GGACAAAGGG CTTTCGATCT AGCTCGACTT GCCAATGATG ACGATGTCAT
GTTGCTTGAT TGGGTTAAAG GACTTCTCAA AGACAGGAAA TTGGAAACAC TGGTAGATGC AGATTTACAG GGCAATTATA
TTGATGAGGA GGTAGAGCAA TTAATCCAAG TGGCACTGCT ATGCACACAG GGCTCTCCTA TGGAAAGACC AAAGATGTCT
GAAGTGGTCA GAATGCTAGA AGGTGATGGT TTGGCTGAGA AATGGGAGCA ATGGCAGAAA GACGAGACCT TCCGGCAAGA
CTTCAACAAC AACATTCATC ACCCTAATGC AGCAAATTGG ATAGTAGATT CAACTTCCCA CATCCAACCA GATGAACTGT
CAGGTCCTAG ATGA

>Vigan.05G016900.01
MERVNSSFMT SFFVWAILVL DLVLKASGNQ EGDALNALKS SLLDPNNVLQ SWDATLVNPC TWFHVTCNSD NSVTRVDLGN
ADLSGQLVSQ LGQLTNLQYL ELYSNNISGK IPEELGNLTN LVSLDLYLNN LTGSIPTTLG NLAKLRFLRL NNNTLTGGIP
MTLTNVSSLQ VLDLSNNHLT GNIPVNGSFS LFTPISYQNN SGLIQPKNVP SPASPTPPPA SSGNSNTGAI AGGVAAGAAL
LFAAPAIALA YWRRRKPQDH FFDVPAEEDP EVHLGQLKRF SLRELQVATD NFSNKHILGR GGFGKVYKGR LADGSLVAVK
RLKEERTQGG ELQFQTEVEM ISMAVHRNLL RLRGFCMTPT ERLLVYPFMA NGSVASCLRE RQEAQPPLGW PERKRIALGS
ARGLAYLHDH CDPKIIHRDV KAANILLDEE FEAVVGDFGL AKLMDYKDTH VTTAVRGTIG HIAPEYLSTG KSSEKTDVFG
YGVMLLELIT GQRAFDLARL ANDDDVMLLD WVKGLLKDRK LETLVDADLQ GNYIDEEVEQ LIQVALLCTQ GSPMERPKMS
EVVRMLEGDG LAEKWEQWQK DETFRQDFNN NIHHPNAANW IVDSTSHIQP DELSGPR*