GBrowse Details

Vigan.05G037400.01

Basic Information:
Name: Vigan.05G037400.01
Multiple alignment
Variant Information
Position: Chr05:2477531..2481902 (- strand)
Length: 4372
Functional Information:
Description: Similar to uncharacterized LOC101206733. [XP_004168002.1, Cucumis sativus]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.00,7.07,1.13,1.02,11.17,1.69,0.34,1.25
Arabidopsis thaliana homolog: AT1G11120.1
Automatic updates:
Name: NM_001250850 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100527043 (LOC100527043), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr05:2477531..2477947 (- strand)
Length: 417
Type: three_prime_UTR
Position: Chr05:2477948..2478124 (- strand)
Length: 177
Type: CDS
Position: Chr05:2481252..2481545 (- strand)
Length: 294
Type: CDS
Position: Chr05:2481546..2481902 (- strand)
Length: 357
Type: five_prime_UTR


>Vigan.05G037400.01
GTAAAAATAT TTATATTACG ATTTTATCCA GACAGAAAAA CAAAAGACAG GGTCCTAAAT CCAAATTCCA AAGTTTCTCC
TTTTTTGCAA GGGGCAGCCA CCCCACATGT TTGCTCCTTT CTCTCTCTTG AATGCTCAAA TTAAGAACAG TGCTGAGTTG
AGAGCTACTA TAAAGCCAAA CCTTAACCTG TAGTAGTCAC CATATTCTTC CCTGCCTGCA CTGCACCACT TCTTCATCTC
TCTTTACTAT CTCGTCTTCT TCTTCAACTT TACAGTCACT AATGCCTGAA ATTCAAACGT GAACAGAAGC CAACTTGTCC
AGAATGGTAA AACAGAGTTA AGAAAAGCAA AGGAAGAATG GTGAGAGAGC ACAATAGCAT TAGCAGTGGA TGGCCACCAA
TAGGGGCACC ACTGAACATG CAGAGAGATG AATATGATCA GCATTGGAGC AGCAGCTTCG ACAGTTCAGT AAATGCTGTT
TCTTTTGGCT TTGTTGCCAC TGCCATTCTC ATTTCTATGT TCTTAGTCAT GGCCATCTTT GAAAGGTTTC TCAAACCCAC
CTCGCCGCCC CTGTTGCCGT CAGCCGACTG GAACCGTCGC CGGAGCTCTC AGATGGCCTT CAATGGGAAG ATTGGCCACC
CTTCACCGAA AATGAGTTTG TATGCAAGCT GGGTTTCGGT TTTAATGCCT GGAGATGAGA CTCCTTCTTT CATCGCTCAT
CCTGCACCTG CACCATGTTG CCCTGAACGG ATATCATGGC CTCCCCATCA ACATAGCTCA GTACCTTATT CCACTTACAC
CACCATGCAT AACATCAACC AAGTATAATA AGAATTCAGT GTGACAAGTT TATGCAATGT GTGCATGTTA CATTAAGGAG
TTAAATGCCT TTCAAATGAA GAAAGTAGAC TTGTTATGTA GAAGATTTCT TTATAGTTTA TAGAATACCA TGTACATAGA
ATTTAGTTTA GTGGAAATTG GTTTGGGAAT GAGGTCCATC TCTTCACTGT CCAATTCCTC CCTGACAGAA GCTTTGGGGT
TTCCCAGAGT GTAAATCAGT GGTTGTAAAT GCATAGAATG TTGTGCACCA AACAATGGAA ACCTCTTTAT CTTGCACACA
AACAAAGACC ATACTTAGTA TAGCATGATC AAAACGCACG CGTAAAATCA AATAATATTG TCACTCTGAT AATGACACGT
GAGTAGCTTT TACCATAATT GTCAGTTTGG TCGTTGGAAT CCTCG

>Vigan.05G037400.01
ATGGTGAGAG AGCACAATAG CATTAGCAGT GGATGGCCAC CAATAGGGGC ACCACTGAAC ATGCAGAGAG ATGAATATGA
TCAGCATTGG AGCAGCAGCT TCGACAGTTC AGTAAATGCT GTTTCTTTTG GCTTTGTTGC CACTGCCATT CTCATTTCTA
TGTTCTTAGT CATGGCCATC TTTGAAAGGT TTCTCAAACC CACCTCGCCG CCCCTGTTGC CGTCAGCCGA CTGGAACCGT
CGCCGGAGCT CTCAGATGGC CTTCAATGGG AAGATTGGCC ACCCTTCACC GAAAATGAGT TTGTATGCAA GCTGGGTTTC
GGTTTTAATG CCTGGAGATG AGACTCCTTC TTTCATCGCT CATCCTGCAC CTGCACCATG TTGCCCTGAA CGGATATCAT
GGCCTCCCCA TCAACATAGC TCAGTACCTT ATTCCACTTA CACCACCATG CATAACATCA ACCAAGTATA A

>Vigan.05G037400.01
MVREHNSISS GWPPIGAPLN MQRDEYDQHW SSSFDSSVNA VSFGFVATAI LISMFLVMAI FERFLKPTSP PLLPSADWNR
RRSSQMAFNG KIGHPSPKMS LYASWVSVLM PGDETPSFIA HPAPAPCCPE RISWPPHQHS SVPYSTYTTM HNINQV*