GBrowse Details

Vigan.05G063300.01

Basic Information:
Name: Vigan.05G063300.01
Multiple alignment
Variant Information
Position: Chr05:4575269..4577728 (+ strand)
Length: 2460
Functional Information:
Description: Hypothetical protein.
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.00,0.09,1.59,10.37,7.33,1.42,4.13,1.60
Automatic updates:
Name: NM_001354185 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100800652 (LOC100800652), transcript variant 2, mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr05:4575269..4575543 (+ strand)
Length: 275
Type: five_prime_UTR
Position: Chr05:4575544..4575720 (+ strand)
Length: 177
Type: CDS
Position: Chr05:4576457..4576522 (+ strand)
Length: 66
Type: CDS
Position: Chr05:4576900..4577403 (+ strand)
Length: 504
Type: CDS
Position: Chr05:4577404..4577728 (+ strand)
Length: 325
Type: three_prime_UTR


>Vigan.05G063300.01
AATGCACGTG ATATCTTTTT GGTTTCCATT TGGAAGACTT GGTCGTTTGC AAGAAACAAC AGAAGTCCAT GCAGAAGGAA
ACAACGAGTT GAGTTCCTCA AACCAATTAG AAACCTTTCT ATAAAGCAGC TTCAAATTGA TGGAAGCTTC GGGTATGCGT
GTTTTATGGT TTATTTTTCG TATTTGAAGA TTCTCAGAGA CAAATAGAAA CATTGGTAAT TTAGTGCCAG TGAAGGAGCT
TAAAAGCAAG GCTAAGATAT ACACAGTACA AACGTATGAT GGCATGTTCT GTGCCTTTTA ACAAGAAGAA TTTGGACATA
AGTTTCTTCG TTTTCAAGCC AACTATTGTG ATCATAGATG ACCTAGTTCA TGAACTCAAA CACTTCTCCT TAACTACTGA
GAACCTTGGC TGTGTTCAGA GCTCTATATT TAGAAGCATC CATGGAAATA TGATCATATG GTATGGAGCA TGGCCGAGGC
AGTCGAGTAA GGAAAAAGAG GAGCTGACCT CAACCCTTAA AACAATGTTA ACCAACAGCA TATCAACCAT GGCTGTGTTA
ACTGATCACA GTTTCCTTGA AGCATATGGT GGAGAGTCAA GAGACGGGTC TTCCACAGCA AAATTCTCCA CTGGGGACAT
ATTATCCTTG AACTCAGCAG TGACCACTAC CAATGACCTT AATGATCTCT GCTACGCTGT TCTAGCAATT TTAAGGTCTC
GCTTTGCCAA AATTGAAGGA ACAATCTCTG GGCTTTGCTT CAAGGGACAA AGCAAACCCA GAATGGTGTG CATGCATGTC
TGGAAGTCTC TCCATTTTTG TTACTCATGG ATTCTGAACT CCGACCAAAG AAAATGGATG ATGCCATATC TCGAACGTTT
CTCCATTGAG ATGAAGTATG ACATTTTCCG AGTAGTGTAT GTCAGTGGTG ACAATGTGGT TGATTTCAAC TGTGTTTCTA
CTCATCAGAT GTTAGAAAAT GGGAAGGAGA AGAGCATGCA AGGGCAGGTT ATGCAGAACT GAGATAGCTG CAAAGGGTTT
CAAGTTTACA ACCATCATCT TTTGCCGACT TTTTAAACTC CCTCTTATAC TGTAAATATT GCAAGTTACT CTCAAAGTCA
GGTTACAGTT TAGAACTCAA AATCCTATGT AAGGTTTTGG TTTTGGTTTC GGACTGCAAA GTCTTGATCA GTGAAAGAAT
GAATCATATT TAATAAAGAA ATACTGTGTA AGGTTTTGGC TTACACGTCT TAATGTTCAG AAAAAGTATG AATCAAAAGG
TTCGATTTCA GAAATAGTGT GAAATCCCTT GAATCATTCT TGTTTTCAAA CCCACCCCAG AGTTGAA

>Vigan.05G063300.01
ATGATGGCAT GTTCTGTGCC TTTTAACAAG AAGAATTTGG ACATAAGTTT CTTCGTTTTC AAGCCAACTA TTGTGATCAT
AGATGACCTA GTTCATGAAC TCAAACACTT CTCCTTAACT ACTGAGAACC TTGGCTGTGT TCAGAGCTCT ATATTTAGAA
GCATCCATGG AAATATGATC ATATGGTATG GAGCATGGCC GAGGCAGTCG AGTAAGGAAA AAGAGGAGCT GACCTCAACC
CTTAAAACAA TGTTAACCAA CAGCATATCA ACCATGGCTG TGTTAACTGA TCACAGTTTC CTTGAAGCAT ATGGTGGAGA
GTCAAGAGAC GGGTCTTCCA CAGCAAAATT CTCCACTGGG GACATATTAT CCTTGAACTC AGCAGTGACC ACTACCAATG
ACCTTAATGA TCTCTGCTAC GCTGTTCTAG CAATTTTAAG GTCTCGCTTT GCCAAAATTG AAGGAACAAT CTCTGGGCTT
TGCTTCAAGG GACAAAGCAA ACCCAGAATG GTGTGCATGC ATGTCTGGAA GTCTCTCCAT TTTTGTTACT CATGGATTCT
GAACTCCGAC CAAAGAAAAT GGATGATGCC ATATCTCGAA CGTTTCTCCA TTGAGATGAA GTATGACATT TTCCGAGTAG
TGTATGTCAG TGGTGACAAT GTGGTTGATT TCAACTGTGT TTCTACTCAT CAGATGTTAG AAAATGGGAA GGAGAAGAGC
ATGCAAGGGC AGGTTATGCA GAACTGA

>Vigan.05G063300.01
MMACSVPFNK KNLDISFFVF KPTIVIIDDL VHELKHFSLT TENLGCVQSS IFRSIHGNMI IWYGAWPRQS SKEKEELTST
LKTMLTNSIS TMAVLTDHSF LEAYGGESRD GSSTAKFSTG DILSLNSAVT TTNDLNDLCY AVLAILRSRF AKIEGTISGL
CFKGQSKPRM VCMHVWKSLH FCYSWILNSD QRKWMMPYLE RFSIEMKYDI FRVVYVSGDN VVDFNCVSTH QMLENGKEKS
MQGQVMQN*