GBrowse Details

Vigan.05G070700.01

Basic Information:
Name: Vigan.05G070700.01
Multiple alignment
Variant Information
Position: Chr05:5241267..5243160 (+ strand)
Length: 1894
Functional Information:
Description: Similar to Uncharacterized protein. [I1M1C5, Glycine max]
InterPro: Uncharacterised protein family UPF0497, trans-membrane plant subgroup (IPR006459)
Uncharacterised protein family UPF0497, trans-membrane plant (IPR006702)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.00,0.00,0.11,0.03,1.22,11.98,0.80,0.42
Arabidopsis thaliana homolog: AT3G06390.1
Automatic updates:
Name: NM_001370861 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max MARVEL domain-containing protein (LOC100781023), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr05:5241267..5241395 (+ strand)
Length: 129
Type: five_prime_UTR
Position: Chr05:5241396..5241613 (+ strand)
Length: 218
Type: CDS
Position: Chr05:5242172..5242298 (+ strand)
Length: 127
Type: CDS
Position: Chr05:5242422..5242646 (+ strand)
Length: 225
Type: CDS
Position: Chr05:5242647..5243160 (+ strand)
Length: 514
Type: three_prime_UTR


>Vigan.05G070700.01
AACTTCATTG CTCAACTATC TCCACCCTGC ATCTTTCAAA GTTGCAATTT GCAAGTCCCA CTAAGTCTAC TACTAGTACC
TACCACTCAA ATCAACTTCA TTACTCACCT TGCTCATAAG CACCACTTCA TGGCTTCTAC AGATATTGAG TACAAATCAT
CTTCAACACC ACCTCCTCCG GCTGGAGTGG ATTATTTCAA AGTTCATGTG ATCCTCAGAT TCCTGTTGTT GGCCGCATCA
GTGGTGGCAC TTGGAGTGAT TGTCTCCAGT GATCAAACAG AGCTAGTCCT CTTCCAAGGT ACGCTTGTAC CTCAGCCAGC
CAAGTTCCAG CACTCACCAG CTTTTGTATA TTTTGTGGCT GCATTCAGTG TCTCTGGCCT TTATGCCCTC GTTTCTGCTC
TAGCCTCTAT CGCTGTAATC CAGCAGCCAG AATTCAAACT GAAGTTCCTC CTCAACTTTA TCTTCTGGGA TACACTAATA
CTGGGGATAA TAGCCTCAGC AACAGGAGCA GCAGGAACTG TGGCATATAT TGGTTTAAAG GGAAACAGTC ATGTGGGTTG
GATAAAAGTT TGCAATGTCT ACGACAAGTT CTGTAGGCAT CTTGCTGGAT CCATAGCTGT GGCTTTGTTT GGCAGCATTA
TCACTGTTCT GCTCATCTGG CTTTCAGCTT TCACCATTTA CAGCCGAGTC CCCAAGTAGA AGGAAGGAAT ACGAGCCATT
CAGCATATAC ATATTCACTA AATCAGTGTG TCGAGTTAAT ATTCATAGTT TGGTGTGAAT ACCCTTTTGG TCTTTGTGAG
TGTTTCTTCT AAGGTGGTGA CCATATGTGA AAATGAATGA TAGTAACACA TTCTTTTCAC ATATTCTTTG TCATTGAATG
AAATTCATGT GAGTCTTGCT ATATGATGCA GGTAGACTCC ATATTCACCA AGTTTCATAT AAATTACATC TAGGAATAAT
GTACATATTG AAAAGTTGTG TCAAGTAATC CGCATCTAGC ATTTCTCACG TTTGTGAAGT GTAAACGATG TCTCCATGGA
TCCAGTTGTA TTTTCCATTC TATTTGTGCT GAAAAGAATT ATCCGATTAT CTTTCTCCCT CAAAAGCAAA ATATGTTTAT
CACTAATCAA TCAAGCACAA GTAATATGGT TAATGCTTTT ATATTTAATC CCCTAGCTTG CTTTAAAATA GGGTTTAGTC
CATCCATTCT AAA

>Vigan.05G070700.01
ATGGCTTCTA CAGATATTGA GTACAAATCA TCTTCAACAC CACCTCCTCC GGCTGGAGTG GATTATTTCA AAGTTCATGT
GATCCTCAGA TTCCTGTTGT TGGCCGCATC AGTGGTGGCA CTTGGAGTGA TTGTCTCCAG TGATCAAACA GAGCTAGTCC
TCTTCCAAGG TACGCTTGTA CCTCAGCCAG CCAAGTTCCA GCACTCACCA GCTTTTGTAT ATTTTGTGGC TGCATTCAGT
GTCTCTGGCC TTTATGCCCT CGTTTCTGCT CTAGCCTCTA TCGCTGTAAT CCAGCAGCCA GAATTCAAAC TGAAGTTCCT
CCTCAACTTT ATCTTCTGGG ATACACTAAT ACTGGGGATA ATAGCCTCAG CAACAGGAGC AGCAGGAACT GTGGCATATA
TTGGTTTAAA GGGAAACAGT CATGTGGGTT GGATAAAAGT TTGCAATGTC TACGACAAGT TCTGTAGGCA TCTTGCTGGA
TCCATAGCTG TGGCTTTGTT TGGCAGCATT ATCACTGTTC TGCTCATCTG GCTTTCAGCT TTCACCATTT ACAGCCGAGT
CCCCAAGTAG 

>Vigan.05G070700.01
MASTDIEYKS SSTPPPPAGV DYFKVHVILR FLLLAASVVA LGVIVSSDQT ELVLFQGTLV PQPAKFQHSP AFVYFVAAFS
VSGLYALVSA LASIAVIQQP EFKLKFLLNF IFWDTLILGI IASATGAAGT VAYIGLKGNS HVGWIKVCNV YDKFCRHLAG
SIAVALFGSI ITVLLIWLSA FTIYSRVPK*