GBrowse Details

Vigan.05G074400.01

Basic Information:
Name: Vigan.05G074400.01
Multiple alignment
Variant Information
Position: Chr05:5490807..5493065 (+ strand)
Length: 2259
Functional Information:
Description: Similar to Uncharacterized protein. [I1MFB5, Glycine max]
InterPro: Bax inhibitor 1-related (IPR006214)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:285.18,100.27,172.81,108.61,169.65,353.71,212.24,139.75
Arabidopsis thaliana homolog: AT4G15470.1
Automatic updates:
Name: NM_001250824 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100499906 (LOC100499906), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr05:5490807..5490987 (+ strand)
Length: 181
Type: five_prime_UTR
Position: Chr05:5490988..5491249 (+ strand)
Length: 262
Type: CDS
Position: Chr05:5491409..5491522 (+ strand)
Length: 114
Type: CDS
Position: Chr05:5491621..5491778 (+ strand)
Length: 158
Type: CDS
Position: Chr05:5492474..5492680 (+ strand)
Length: 207
Type: CDS
Position: Chr05:5492681..5493065 (+ strand)
Length: 385
Type: three_prime_UTR


>Vigan.05G074400.01
CCCAGTTTGC AATCAAACGT CACTGACGTG TCTGTGAGGA TTGTGAAAAG GAAGTGAGGT GTGAGAATAG CAAAAGCCTT
TTCTTTTAGA TAATAAAGAA AGAAAAGAGA AAAAAAGCAT AATAATAAGA ATAAGAAGCA GAGGTGTTTG ATTTGGTTTG
GTCCCATCGG AAGAGAAAAA GATGTTCGAG ACGCAGCAGA TGTACGCACG TGCGAAGACA GAGGAATTCG ACGTCGAATC
GGGCGAAACG CTCTACCCAG GGTTGAGCCT CGGCGAGAAC CAGCTCCGAT GGGGTTTCAT CCGCAAGGTC TACGGCATCC
TCTCCGCTCA GATCGTCCTC ACCACACTCG TTTCTCTCGT AACCGTTTTC TATTCCCCAA TTAACGACCT CCTCAAGGGA
AATTCCACTC TCCTCCTCGT TCTCGTTTTT CTCCCCTTCG TCTTTTTGAT TCCCCTGCTC AAGTACCAGC AGAAGCATCC
GCATAATTAC ATCTTCCTTG GACTCTTCAC CGTCTCCATC AGCTCCACTG TGGGAGTCAC GTGTGCCAAC ACCGACGGGA
AAATTGTGCT TGAGGCGTTG GTTTTGACTT CGGCTGTGGT TTCCTCTCTC ACGGGATATG CTTTTTGGGC TTCCAAGAAG
GGCAAGGATT TTAGCTACCT TGGCCCGATA TTGTTCACCT CCCTGTTTAC TCTTTTCCTC ACCGGCATGA TGCAGATGTT
CTTCCCTCTT GGGCCTACTG CCCATGCTAT CTATGGTGCA ATTGGTGCCA TGATTTTCTC GGGCTATATT GTGTATGACA
CCGACAATCT GATCAAGCGC TTCACTTATG ATGAGTACAT TGGAGCCTCG GTCACTCTTT ATCTTGACAT TCTCAATCTC
TTCCTTTCCA TCTTAAGGGT CCTCAGGGAG GCAAATAATT AGACATCTTG AGGTTGAGTC ATTCAAATTC AGAAGACTTT
GTTGCATGAT TATAATATAC TGCTGGAAGC ATTGTGAAAT ACAATACACT CTGCTTCCTT GTACTCATTT ACAGCTTATG
ATACTTTGAT CCAATGAAAT TTAAAGCTTT ACAATTGTAT GTAAGCGTGA TATAAGAATG AAGAATCTCC TATGCGAAAT
GTTTCTGCTT GCTTTGTTTT GACGTGGGTT GCTTTTCGAT TTAATGCTTC ATGTATTCAT ATGAATTAAT ATACTACCAC
CTGACTTGTG TGAGTAAAAT TGTGATGTTG CTATTGTGTA AAATATAACG TGGAATGATT TGTTCTACAA ACTTCTGGTA
CTATGTGGAT GGTAACTTCT CGCCAAA

>Vigan.05G074400.01
ATGTTCGAGA CGCAGCAGAT GTACGCACGT GCGAAGACAG AGGAATTCGA CGTCGAATCG GGCGAAACGC TCTACCCAGG
GTTGAGCCTC GGCGAGAACC AGCTCCGATG GGGTTTCATC CGCAAGGTCT ACGGCATCCT CTCCGCTCAG ATCGTCCTCA
CCACACTCGT TTCTCTCGTA ACCGTTTTCT ATTCCCCAAT TAACGACCTC CTCAAGGGAA ATTCCACTCT CCTCCTCGTT
CTCGTTTTTC TCCCCTTCGT CTTTTTGATT CCCCTGCTCA AGTACCAGCA GAAGCATCCG CATAATTACA TCTTCCTTGG
ACTCTTCACC GTCTCCATCA GCTCCACTGT GGGAGTCACG TGTGCCAACA CCGACGGGAA AATTGTGCTT GAGGCGTTGG
TTTTGACTTC GGCTGTGGTT TCCTCTCTCA CGGGATATGC TTTTTGGGCT TCCAAGAAGG GCAAGGATTT TAGCTACCTT
GGCCCGATAT TGTTCACCTC CCTGTTTACT CTTTTCCTCA CCGGCATGAT GCAGATGTTC TTCCCTCTTG GGCCTACTGC
CCATGCTATC TATGGTGCAA TTGGTGCCAT GATTTTCTCG GGCTATATTG TGTATGACAC CGACAATCTG ATCAAGCGCT
TCACTTATGA TGAGTACATT GGAGCCTCGG TCACTCTTTA TCTTGACATT CTCAATCTCT TCCTTTCCAT CTTAAGGGTC
CTCAGGGAGG CAAATAATTA G

>Vigan.05G074400.01
MFETQQMYAR AKTEEFDVES GETLYPGLSL GENQLRWGFI RKVYGILSAQ IVLTTLVSLV TVFYSPINDL LKGNSTLLLV
LVFLPFVFLI PLLKYQQKHP HNYIFLGLFT VSISSTVGVT CANTDGKIVL EALVLTSAVV SSLTGYAFWA SKKGKDFSYL
GPILFTSLFT LFLTGMMQMF FPLGPTAHAI YGAIGAMIFS GYIVYDTDNL IKRFTYDEYI GASVTLYLDI LNLFLSILRV
LREANN*