GBrowse Details

Vigan.05G090600.01

Basic Information:
Name: Vigan.05G090600.01
Multiple alignment
Variant Information
Position: Chr05:6938263..6942331 (- strand)
Length: 4069
Functional Information:
Description: Similar to Uncharacterized protein. [V4W9V5, Citrus clementina.]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:8.47,18.68,14.36,11.50,23.54,20.90,18.42,12.30
Arabidopsis thaliana homolog: AT4G22320.1
Automatic updates:
Name: NM_001248546 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100527395 (LOC100527395), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr05:6938263..6938652 (- strand)
Length: 390
Type: three_prime_UTR
Position: Chr05:6938653..6938790 (- strand)
Length: 138
Type: CDS
Position: Chr05:6939184..6939354 (- strand)
Length: 171
Type: CDS
Position: Chr05:6941686..6942012 (- strand)
Length: 327
Type: CDS
Position: Chr05:6942013..6942331 (- strand)
Length: 319
Type: five_prime_UTR


>Vigan.05G090600.01
AAATTATATA AGAACAGAAG AATTAGGAAG GGTGGATAAA CCTAACCCGA CCCGCTGCAG TATCATCAAT AGGCACTACG
GACGGTCCTG ATTGGCCACA GCATAAACCA GGAGAGGTGA TCTCTGACCC AGACGGTAAG GAAAAGACAG TGTTTTGTAT
TTATGTAGAG AGAGAAAGGG AAAGAAGAAG AGGGTTTTGT AGGGAAGAAA AATTAGAACA AAAATCAAAA TATTTATCTG
AAGAAAAAAG AAATTGAAAA AAGGCGGGTG TTTGTTTTGG TGGAGGCGTG GAGGCGTATC GGAGACAGAT CTGGTATAGA
TGGAGGGAGT TGGGGCCCGA TTAGGGCGGT CCTCGACCCG ATATGGACCG GCCACGGTGT TCACTGGACC GGTGCGGAAG
TGGAAGAAGA AATGGGTCCA TGTATCACCC TCTTCTGCTT CCTCTAATTC TAACACCAAT CACAATCACA ACCACACTCA
TTCTTCCAAC GCCTCTCATC TTCTCCTCTA CAAGTGGACC CCTATCACCC AAAGCCACAA CACCACTACC AACAACTCCA
ACACCGCCAC CGCCAATGGT AACACCAAGG ATGCACAGCC GGAACAACTT GAAGAACCGC CTCGGAGAAA GTTCAAATAT
GTTCCGGTTG CTTTACTAGA GGAGCAGAGA AATGAGGCTG CTGAAAATGA GGGTGCTGAG AAGCTTGATG AGTCTAAACC
AACTGATACT GATTCGGGTG CAGCAGAGTC AGCTCGCAAG AGTGAAACTT TGGATGAAAA ACCTGACATA AATGATGTTC
CAATGGAAGA AAGTCAGTCT CAGTACAAAA ATCAGGTGGT GCGCCAAGAT CTGAACGAAA GCACGTTGGA TTTAAGTTTG
GGCTTGACAT CACACGAAGA TGAACATGAT TCTGATTCAA AACCTAATCA AACAAGAGAT GGCCAGCAAC GCTAGTTAAC
GTGAGTGGTA ATGAAACATG AACAGGGGTC TCATGATTCT CCGGTTGGTA AGAACGTAAA AGGTTCAGTC TATACATTCG
TCTGATGGAA GGGAATTGAC CCCTGGCTTT ATGTTCAACC AATGGTTATT GTAGGTTGGA TTATTGTAAC GGCATATGGC
TTTAATGTGG ATTTTTTTTA CTCTCTCCTT GCTGCGCTGA CCGTAATTTG TATTGGAGGA ACGGATATTG TACCCATTTT
CTCAATCATT GGACATATTT TTGTTCAGAT ATTTATTCAA ATAGGATATT CTGGACTTTG AACCTACAAT CGTGTGGAGC
TACATTGGAT TTTTTTAGAA ATTAAGATTC CTCATAAAAA AACAATCTGT TTCTGTAGTC CTGCT

>Vigan.05G090600.01
ATGGAGGGAG TTGGGGCCCG ATTAGGGCGG TCCTCGACCC GATATGGACC GGCCACGGTG TTCACTGGAC CGGTGCGGAA
GTGGAAGAAG AAATGGGTCC ATGTATCACC CTCTTCTGCT TCCTCTAATT CTAACACCAA TCACAATCAC AACCACACTC
ATTCTTCCAA CGCCTCTCAT CTTCTCCTCT ACAAGTGGAC CCCTATCACC CAAAGCCACA ACACCACTAC CAACAACTCC
AACACCGCCA CCGCCAATGG TAACACCAAG GATGCACAGC CGGAACAACT TGAAGAACCG CCTCGGAGAA AGTTCAAATA
TGTTCCGGTT GCTTTACTAG AGGAGCAGAG AAATGAGGCT GCTGAAAATG AGGGTGCTGA GAAGCTTGAT GAGTCTAAAC
CAACTGATAC TGATTCGGGT GCAGCAGAGT CAGCTCGCAA GAGTGAAACT TTGGATGAAA AACCTGACAT AAATGATGTT
CCAATGGAAG AAAGTCAGTC TCAGTACAAA AATCAGGTGG TGCGCCAAGA TCTGAACGAA AGCACGTTGG ATTTAAGTTT
GGGCTTGACA TCACACGAAG ATGAACATGA TTCTGATTCA AAACCTAATC AAACAAGAGA TGGCCAGCAA CGCTAG

>Vigan.05G090600.01
MEGVGARLGR SSTRYGPATV FTGPVRKWKK KWVHVSPSSA SSNSNTNHNH NHTHSSNASH LLLYKWTPIT QSHNTTTNNS
NTATANGNTK DAQPEQLEEP PRRKFKYVPV ALLEEQRNEA AENEGAEKLD ESKPTDTDSG AAESARKSET LDEKPDINDV
PMEESQSQYK NQVVRQDLNE STLDLSLGLT SHEDEHDSDS KPNQTRDGQQ R*