GBrowse Details

Vigan.05G177800.01

Basic Information:
Name: Vigan.05G177800.01
Multiple alignment
Variant Information
Position: Chr05:15171506..15174829 (+ strand)
Length: 3324
Functional Information:
Description: Similar to Uncharacterized protein. [I1MZX3, Glycine max]
GO: Molecular Function: N-acetyltransferase activity (GO:0008080)
InterPro: GNAT domain (IPR000182)
Acyl-CoA N-acyltransferase (IPR016181)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.02,0.04,16.10,3.85,3.43,1.77,0.52,2.16
Automatic updates:
Name: BT094065 NCBI(nuccore)
Organism: Glycine max
Description: Soybean clone JCVI-FLGm-18I21 unknown mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr05:15171506..15171902 (+ strand)
Length: 397
Type: five_prime_UTR
Position: Chr05:15171903..15172076 (+ strand)
Length: 174
Type: CDS
Position: Chr05:15172288..15172863 (+ strand)
Length: 576
Type: CDS
Position: Chr05:15172864..15174829 (+ strand)
Length: 1966
Type: three_prime_UTR


>Vigan.05G177800.01
TATTAATCTA ACTTTTGTCT ACTATTATTA TTGAAGCCTA GGTTATGGAT GAATCTGATA AAGAACATTC TCCCTAGTTT
CAATCTCTCT CTTTCTATTT TCACTCTTCC TTTTTCTTTC TCTCTCTTTC CACCACCTTT TTTTTTCTTT TGTATTTTAT
TGTATTTTGT TTTTCTTTCT ACCTCCTGCA TATAAATCAT TATCATAATG AGGTCTATGC CAAACCATTC TTGTTGTAGT
ACTTGTATTA CTTCTCGTTG GTTGCACTGT CTTGCTATTT GTATCTTGTG TACCTTGTTG AGCTTTGGGT TTCCTTTTAC
TTTTGTTTCG CTGAATCATC ACACATCAAA CACCTTCGTT CTAAGTTGAT CATCCTTGAA ATCTCTTTGT TTTGGGTATG
GAATTCAACA AGTTCAGAAT CAGAAGCTAC GAGGGGCAAT ATGATAGGGC TCAAGTGGAA GATCTTGAGA GAAGATGCGA
GGTAGGGCCA TCAGAAAGCG TGTTCCTCTT CACAGACACT ATGGGTGACC CCATTTGTAG GATTCGGAAC AGTCCAATGT
ACATGATGCT GGTGGCAGAG TTGGAGAATG AACTGGTTGG TGTGATTCAA GGGTCTATAA AGCTGGTGAC GGTTCATGGT
CATCCTCCGA AGGATTTGGC AAAGGTGGGG TATGTCCTTG GCTTAAGGGT ATCACCCCAT CACAGGAGAA AAGCGATTGG
CTCGAGCCTT GTGAGAAGGC TAGAAGAATG GTTCAGTTCA AAGGATGTGG ACTATGCATA TATGGCAACA GAGAAAGACA
ACCAAGCCTC GGTCAGTCTC TTTATGGACA AGTTTGGCTA CACCAAGTTT AGGACTCCAG CTATTCTTGT GAACCCTGTG
AACCATCATT GCTTTCAAAT ATCAGCCAAC ATTGAGATAG CAAGGTTGAA GGTTGACCAA GCTGAATACC TCTACAGAAG
ATTCATGGGG TCCACAGAGT TTTTTCCCAA TGACATAGGC AACATACTTA GGAACAAGCT AAGTTTGGGG ACATGGGTAG
CCTATTTCAA GGGAGATATT GGTTGGGGGA TTTTGGGTCA GATGGACAAG TCCCTAATAG TTGGGCAATG CTCAGTGTAT
GGAACAGTGG AGAGATATTC AAGCTGAGGC TAGGAAAAGC ACCATTTTCT TGCTTGTTGT GCACCAAGAG TTGGTGGTTG
ATTGATAAAA TCTTCCCATG TTTGAAACTT CCAATCATAC CTGATTTCTT CAACCCATTT GGGTTCTATT TCATGTATGG
GGTGCACCAT GAAGGGCCAT TCTCAGGGAA GCTGGTGAGA GCCTTGTGCC AATTCGTACA CAACATGGCT GCAGAATCAA
AGGATGAGAA TTGCAAGATC ATTGTCACTG AAGTTGGTGG AAGAGACGAG CTCAACCATC ATATTCCACA TTGGAAATTG
CTCTCATGCC CAGAGGACTT GTGGTGCATA AAGCCTTTGA AAAATGAAGG GACAAATAAC AAGTTCCATG AATTAACCAA
AACCCCACCA ACAAGAGCTC TTTTTGTAGA CCCAAGAGAG GTTTAATTAA TGCATGATCT CAAAAAACAC ATATATTAAG
AAAAAAAAAA TAAAAGAGTA ATAAAAGGGG GGACAAGAAA AAGCTTGGAA ATATCTTCAC CTTAATTTTC TTTCTTTTCT
TTCCTTTCCT TTCCTTAGCT TTCTCTAAGA ACCAAAACCC ACCTCATGTA TTGTGTGACA ACTCCATCCA TCTCTCTTGG
TGGGGGGTTT TCTCTGGTTC CTTTCACATC GGTGACACAA AATCTTAAAA GATATCCATA ATTTTGGTGC CACACTTTGG
TGTCCTTCTT AGCAATTCCC ATCTTCTGCC TCATGACTCT GACTACTCAA TCACCATGGT GGTCCAAACT TTGTTCCTTC
CCCTCAGGTA AAATTTTTAG CTGGACCCTC CTCACTCACT TTGTCGCATC TCATTGGGAT ATCATCTCCG TAACATGTAT
GTCATCACTG AAAAAAAAAA CAAAGAAAAA AGAAAAGAGA TTTACTTTCT AGCCATTTTA TATACATAAT GTGTGATCAT
GAAAGTAACC ATTATTCTAT TCCATTCAAG TCAGACTTAG ACAGCTTCTG TTCCAAGATA AAGGGGGAAA GAAAAAATGC
ATGTGACTGT CAAGGGGTTG GTTTCTTCTT CATTTGTGCT CGAGCATTGT TGTCCCTAAC TGCATGAGGA ATGTTGAAGT
TTCCATAGCC TGTGTGGGAA TCAGCCAAAA ACACAAACGA GAGACTTTGC TTGGGTTTTC ACTTTTTACC ATTAATGCAA
ATGTTGGTTA ACTGGCTAGT GACCTTGCTC TTTGTTAGAA CCATATAAAG AGTGAGTTGG ACTAATAAAG TTAGTGGATT
TCTATTTAGA AAGATTCTGT AATTGTTCTA CTTCTGTTCA GTATGACCAC GGAATAGCAC TCATGAACCT TCTGCAATAA
ATGATTGATA CATTACATTT ATCCACACAT TTCTCATCAT CAATGTTTTT CAGTAAAAAC AGTTTACTTA ATCCAGATCA
AAATTTCATT ATCAAAGGTT GTGGCTTTAG TCATGTTCCT TTGAGTTTCC AAAACTTTTT CTGTCCACAT TTCATAAAAT
AGACATTAAG ACCCTTTTGG TTATGAGGAA AGAAAGTTTT CCTTGAGTTC ACACTAAATT TTCTATGGCA AGGGCCATGC
ATTGTCCTTC CTTTGTCTGG AAAACCATGG TGCCGAAAGT GGTTCTTGGA AATAAACCTA AAGATGCAGA GAGCAGCTAG
ACTTAGTAGC CTGAAAAAGA AGGGTGTCTG AAACTGAAGA AATTGAAGAA ACATTGAACT TGAAGGTAGG CTGAGGACCA
CTTTGATTAG TAATTTAGCA GTACTATCTA TCTCCATAGA AAGCCAAAAA CCAAAAGGTC AAAATTTCTG TCATTTGTTT
TGGACTTAGT GCTTGTCGTG AAGTGGAGGA AGCTACCTTT GCTTGCTGTT TTTAGTTTTC GCAAACAATT ATTATGTCAT
GCACTTTACT TCCTGCTTAT GTTCAAAGAC ATTTCATGGC TTTCTTGCCA ATCAATACCA ACCATAATAA TAC

>Vigan.05G177800.01
ATGGAATTCA ACAAGTTCAG AATCAGAAGC TACGAGGGGC AATATGATAG GGCTCAAGTG GAAGATCTTG AGAGAAGATG
CGAGGTAGGG CCATCAGAAA GCGTGTTCCT CTTCACAGAC ACTATGGGTG ACCCCATTTG TAGGATTCGG AACAGTCCAA
TGTACATGAT GCTGGTGGCA GAGTTGGAGA ATGAACTGGT TGGTGTGATT CAAGGGTCTA TAAAGCTGGT GACGGTTCAT
GGTCATCCTC CGAAGGATTT GGCAAAGGTG GGGTATGTCC TTGGCTTAAG GGTATCACCC CATCACAGGA GAAAAGCGAT
TGGCTCGAGC CTTGTGAGAA GGCTAGAAGA ATGGTTCAGT TCAAAGGATG TGGACTATGC ATATATGGCA ACAGAGAAAG
ACAACCAAGC CTCGGTCAGT CTCTTTATGG ACAAGTTTGG CTACACCAAG TTTAGGACTC CAGCTATTCT TGTGAACCCT
GTGAACCATC ATTGCTTTCA AATATCAGCC AACATTGAGA TAGCAAGGTT GAAGGTTGAC CAAGCTGAAT ACCTCTACAG
AAGATTCATG GGGTCCACAG AGTTTTTTCC CAATGACATA GGCAACATAC TTAGGAACAA GCTAAGTTTG GGGACATGGG
TAGCCTATTT CAAGGGAGAT ATTGGTTGGG GGATTTTGGG TCAGATGGAC AAGTCCCTAA TAGTTGGGCA ATGCTCAGTG
TATGGAACAG TGGAGAGATA TTCAAGCTGA 

>Vigan.05G177800.01
MEFNKFRIRS YEGQYDRAQV EDLERRCEVG PSESVFLFTD TMGDPICRIR NSPMYMMLVA ELENELVGVI QGSIKLVTVH
GHPPKDLAKV GYVLGLRVSP HHRRKAIGSS LVRRLEEWFS SKDVDYAYMA TEKDNQASVS LFMDKFGYTK FRTPAILVNP
VNHHCFQISA NIEIARLKVD QAEYLYRRFM GSTEFFPNDI GNILRNKLSL GTWVAYFKGD IGWGILGQMD KSLIVGQCSV
YGTVERYSS*