GBrowse Details

Vigan.05G212300.01

Basic Information:
Name: Vigan.05G212300.01
Multiple alignment
Variant Information
Position: Chr05:20151406..20156806 (- strand)
Length: 5401
Functional Information:
Description: Similar to Uncharacterized protein. [I1K1W1, Glycine max]
GO: Molecular Function: acid phosphatase activity (GO:0003993)
Molecular Function: phosphatase activity (GO:0016791)
InterPro: Histidine phosphatase superfamily, clade-2 (IPR000560)
Histidine acid phosphatase, eukaryotic (IPR016274)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:54.95,36.21,12.86,9.65,14.47,24.54,9.79,12.00
Arabidopsis thaliana homolog: AT1G09870.1
Automatic updates:
Name: NM_001289274 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max multiple inositol polyphosphate phosphatase 1-like (PAP02), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr05:20151406..20152068 (- strand)
Length: 663
Type: three_prime_UTR
Position: Chr05:20152069..20152221 (- strand)
Length: 153
Type: CDS
Position: Chr05:20152329..20152370 (- strand)
Length: 42
Type: CDS
Position: Chr05:20152495..20152691 (- strand)
Length: 197
Type: CDS
Position: Chr05:20152816..20152920 (- strand)
Length: 105
Type: CDS
Position: Chr05:20153604..20153742 (- strand)
Length: 139
Type: CDS
Position: Chr05:20154146..20154202 (- strand)
Length: 57
Type: CDS
Position: Chr05:20154336..20154476 (- strand)
Length: 141
Type: CDS
Position: Chr05:20155013..20155171 (- strand)
Length: 159
Type: CDS
Position: Chr05:20155438..20155731 (- strand)
Length: 294
Type: CDS
Position: Chr05:20155950..20156037 (- strand)
Length: 88
Type: CDS
Position: Chr05:20156203..20156312 (- strand)
Length: 110
Type: CDS
Position: Chr05:20156313..20156806 (- strand)
Length: 494
Type: five_prime_UTR


>Vigan.05G212300.01
ATTCGAACCA TTTACTTATT CCATATTTTG GACACTTTAA ACGACACCGC GTTTAGCGAG TAACTCTTTC CATCCCACTC
ACCTTAAACG ACGCCCATCG CAGACAAACG GTGCCGGTTG CAGGTGCCAC CGCCATTGCG CCAATCTCAC ACAAGAGTCG
TATCCATCAG CCTAATCAAA ACCGTTCATT TCTCTTTCTC CCCAAACTCT TTTTAGAATT ACTGGTAAGA TTCAATTCCC
CTTTCGTTCC TTAGTCTACT TTGTGTGCCT GGTTTTGATG TAAGATGGAA CCAGATAATT CTTTTGTAAA CTTGAGGGTA
GTCAAATATT GAATCCATTA TAAGCTTATT CAGCCAATTG GCGAATTGAC GGCACTGGAG ACACCGATAA CTTTTTGTTT
TTGGTTTTCC AGTTGTGTAA AAAATTCATA AACTATTAAA TTTATGATTG TAGTTGGTGA TTGATTCCAA TTCGGATTTG
AAAACGCAGA GAGAATGAGC AATTCTATCA TGGCCTTTGC TCTGCTATTA TTCCTTTGGT TGATAGGCTA TTCAAACGCC
GAAGAAGATT TCGATGTTCG CAAGCACCTC TCCACTGTGT CTAGATATGG TGCCGTGAAA GACATTGCTG ACAATAACTT
CGTTCCTTCT AAAATCCCGG AGGGATGTGT TCCGATCCAT TTGAATCTTG TGGCTAGGCA TGGAACTCGT TCTCCCACGA
AGAAAAGGAT AAAGAAGTTA GATAATTTGT CTGCTCATCT GGAAGATCTT GTGAGGGATG CAAAAGAGCG AAATTTGCCT
TTGGAGAGGG TTCCTTCCTG GCTGAATGGA TGGAAATCTC CTTGGCAGGG AAGGCTTAGG GGTGGTGAAT TAATTAGCAA
AGGAGAGGAA GAATTATATG ATCTTGGAAT CAGGATTAGA GCCAAGTTTC CAAATTTGTT TGATGAAGAA TACCATCCTG
ACGTATATCC TATTAAGGCA TCTCAGATTC CCCGAGCATC TGCCAGTGCT GTGGCATTTG GTATGGGGCT TTTCAGAGGC
AATGGAAGTC TTGGACCTGG GCGTCATCGA GCCTTTGCTG TTACAAGTGA AAGCCGTGCT AGTGACATAC TGCTGAGATT
TCATGACTGC TGTCATAATT ACAAGGCTTA TCGGAAAAAC CAGGAACCTG CAGTTAGTAA ACTTAAGGAA CCCATTTTGG
ATGAGATTAC ATCTGCACTG ATTGGACGCC ATTACCTTAA TTTTACCAGG GAGGATACAT CTTCTCTCTG GTTTTTGTGT
AAACAGGAGG CATCCTTGTT GGATATAACT AATCAAGCGT GTGGTCTGTT CATCCCTTCT GAGATTGAAT TGCTTGAGTG
GACAGATGAT TTGGAGATGT TTATTCTGAA AGGTTATGGT AAATCACTAA ACTATAGAAT GGGAGTGCCA TTACTTGAAG
ATGTTTTTCA ATCCATGGAA CAGGCTATCA TAGCTAAAGA AGAAAAACAT GCTTCTGGCA GCTTTGAAAA GGCAAGACTT
CGGTTTGCGC ATGCTGAAAC CTTAGTTCCA TTCTCATGTC TCCTTGGTTT ATTTCTTGAA GGATCTGAGA TTAAAAAAAT
TCAGAAGGAA CAACCTCTAC AGCAGCCTCC AATGCCTCCA CAGAAAAGAA AATGGCGGGG TAGCACTGTA GCCCCTTTTG
CTGGTAACAA CATGCTGGTC TTGTATAGTT GTTCTGCTCC AGATAAATCT ATAAGCAAGC ACTTTGTGCA GGTGTTACAC
AATGAACACC CCATTCCATT GCCAGGTTGT GATGGCTCTG ATCTCTGCCC ATTTGAACTA TTCAAGGAAA AAATTGTTGC
ACCACATCAG AGGCATGACT ACCATAAAGT CTGTAATCCA AAGCTAGAGC ATGAGCCCTC GGGCAGCAAG TTTTTTCAGA
TATTTCAGTG GCTTTTCTCA TCAGCGAAAG GTGATAACTA CTCGAAAGAT GAATTTTAGT TTGTATCTTA GGAAAGGAGC
CTCAAATCTT ACGTTCGGCT CCCTTGGTGG TATCATCGTT ACTTATCTAC TTTAAAATAT GAGCGTCTAT TCCTTCTAGC
AGAGAATCAG TTTTACTTTG GTTATGCTGC CAGTAGATAA TGCCTTTGTT TTTGTTTTTA CTATCAGTTA CTGTAATGCC
TTTGCTATTT TTAAGCTTAG TGCTTGAGTA GCTTGAGCCC TCCCATGTTT ACCTTCTAAG ACCCAGAGAA TTTGGAGGTG
GAAAGTTTAG TTCTAAATGT GTTTTTTTTC TCCCTTGGTA GGTTTACTCT CAGTATTCTA CTGATACCAC AGATAGTGTA
ACTTGATGTA ACTGATGCAT TAGCCTCTCA CGAACTCCAC TTTGTTCTTT TTGAACAGTA GATTATGGAG CTGACCTCTG
ACTTCTGGCA ATGCTCACAT TTTCGTGTTT CTTGCTGCTG CTGTCGAATA CGATTTAACG AATCAAATAA GCCAATACAG
ATATGAATTG TTTGCAATAA TGTGAAAGGA GACTGATGTT GCAGAAAGTG GTTTTATGTG TTGCTGAGTT AGAGTTACCG
TGTCATCGAC TAGTTATATT TACTGTGTGA ACTTTACGCA TATTTTGACA AATGTCAACG TTACCTTTTT TCACCAAAAA
AA

>Vigan.05G212300.01
ATGAGCAATT CTATCATGGC CTTTGCTCTG CTATTATTCC TTTGGTTGAT AGGCTATTCA AACGCCGAAG AAGATTTCGA
TGTTCGCAAG CACCTCTCCA CTGTGTCTAG ATATGGTGCC GTGAAAGACA TTGCTGACAA TAACTTCGTT CCTTCTAAAA
TCCCGGAGGG ATGTGTTCCG ATCCATTTGA ATCTTGTGGC TAGGCATGGA ACTCGTTCTC CCACGAAGAA AAGGATAAAG
AAGTTAGATA ATTTGTCTGC TCATCTGGAA GATCTTGTGA GGGATGCAAA AGAGCGAAAT TTGCCTTTGG AGAGGGTTCC
TTCCTGGCTG AATGGATGGA AATCTCCTTG GCAGGGAAGG CTTAGGGGTG GTGAATTAAT TAGCAAAGGA GAGGAAGAAT
TATATGATCT TGGAATCAGG ATTAGAGCCA AGTTTCCAAA TTTGTTTGAT GAAGAATACC ATCCTGACGT ATATCCTATT
AAGGCATCTC AGATTCCCCG AGCATCTGCC AGTGCTGTGG CATTTGGTAT GGGGCTTTTC AGAGGCAATG GAAGTCTTGG
ACCTGGGCGT CATCGAGCCT TTGCTGTTAC AAGTGAAAGC CGTGCTAGTG ACATACTGCT GAGATTTCAT GACTGCTGTC
ATAATTACAA GGCTTATCGG AAAAACCAGG AACCTGCAGT TAGTAAACTT AAGGAACCCA TTTTGGATGA GATTACATCT
GCACTGATTG GACGCCATTA CCTTAATTTT ACCAGGGAGG ATACATCTTC TCTCTGGTTT TTGTGTAAAC AGGAGGCATC
CTTGTTGGAT ATAACTAATC AAGCGTGTGG TCTGTTCATC CCTTCTGAGA TTGAATTGCT TGAGTGGACA GATGATTTGG
AGATGTTTAT TCTGAAAGGT TATGGTAAAT CACTAAACTA TAGAATGGGA GTGCCATTAC TTGAAGATGT TTTTCAATCC
ATGGAACAGG CTATCATAGC TAAAGAAGAA AAACATGCTT CTGGCAGCTT TGAAAAGGCA AGACTTCGGT TTGCGCATGC
TGAAACCTTA GTTCCATTCT CATGTCTCCT TGGTTTATTT CTTGAAGGAT CTGAGATTAA AAAAATTCAG AAGGAACAAC
CTCTACAGCA GCCTCCAATG CCTCCACAGA AAAGAAAATG GCGGGGTAGC ACTGTAGCCC CTTTTGCTGG TAACAACATG
CTGGTCTTGT ATAGTTGTTC TGCTCCAGAT AAATCTATAA GCAAGCACTT TGTGCAGGTG TTACACAATG AACACCCCAT
TCCATTGCCA GGTTGTGATG GCTCTGATCT CTGCCCATTT GAACTATTCA AGGAAAAAAT TGTTGCACCA CATCAGAGGC
ATGACTACCA TAAAGTCTGT AATCCAAAGC TAGAGCATGA GCCCTCGGGC AGCAAGTTTT TTCAGATATT TCAGTGGCTT
TTCTCATCAG CGAAAGGTGA TAACTACTCG AAAGATGAAT TTTAG

>Vigan.05G212300.01
MSNSIMAFAL LLFLWLIGYS NAEEDFDVRK HLSTVSRYGA VKDIADNNFV PSKIPEGCVP IHLNLVARHG TRSPTKKRIK
KLDNLSAHLE DLVRDAKERN LPLERVPSWL NGWKSPWQGR LRGGELISKG EEELYDLGIR IRAKFPNLFD EEYHPDVYPI
KASQIPRASA SAVAFGMGLF RGNGSLGPGR HRAFAVTSES RASDILLRFH DCCHNYKAYR KNQEPAVSKL KEPILDEITS
ALIGRHYLNF TREDTSSLWF LCKQEASLLD ITNQACGLFI PSEIELLEWT DDLEMFILKG YGKSLNYRMG VPLLEDVFQS
MEQAIIAKEE KHASGSFEKA RLRFAHAETL VPFSCLLGLF LEGSEIKKIQ KEQPLQQPPM PPQKRKWRGS TVAPFAGNNM
LVLYSCSAPD KSISKHFVQV LHNEHPIPLP GCDGSDLCPF ELFKEKIVAP HQRHDYHKVC NPKLEHEPSG SKFFQIFQWL
FSSAKGDNYS KDEF*