GBrowse Details

Vigan.05G256600.01

Basic Information:
Name: Vigan.05G256600.01
Multiple alignment
Variant Information
Position: Chr05:32556627..32559060 (- strand)
Length: 2434
Functional Information:
Description: Similar to Uncharacterized protein. [I1NDY7, Glycine max]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.25,0.60,0.00,0.00,0.18,0.18,98.12,0.00
Automatic updates:
Name: NM_001317624 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max probable strigolactone esterase DAD2 (LOC100792503), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr05:32556627..32557002 (- strand)
Length: 376
Type: CDS
Position: Chr05:32558484..32558866 (- strand)
Length: 383
Type: CDS
Position: Chr05:32558867..32559060 (- strand)
Length: 194
Type: five_prime_UTR


>Vigan.05G256600.01
TGATGCTACA CTATAACGAA ACAAACTGCA CAAAACAAAC AACTTCTAAC CACTCCATTC TCTTATATTT AATTCTCTAC
ATTTCGTTCA TTTAACACTA TAAATTGAGA TCATAATAAG CAGTAACAAA AGCAGCTTCA AGAAGCTAAA TCAGTCTATA
GTTCAAGGTA AGTTTTTGAA CAATATTTTG AATCATGGCG GCACCAGAAA AGAGGCTTTC AACAGGTTTA AATGCAAGAA
GCATAGGGTC AGGCAAGGAA ACCATAGTTT TGTGTCATGG GTTTGGAACG GACCAATCGA TATGGCACAA AATCATTCCC
CTTTTGGCAG AAAGTTACTC TCTGGTTCTC TTTGATTGGC CTTTTTCTGG GGCTGTGACT GATAAGAGCC TTTATGAGCA
TGCCAAGTAC ACCTCCTTTG AACCTTATGC TGATGATTTG ATCACTGTCA TAGATGAGAT GGACCTCAAC TCTGTCACTT
TTGTTGGACA TTCCATGTCT GCTATGATTG GTTGCATTGC CTCCATTAAA AGACCTCACC TCTTCAATAA TCTCATTCTT
GTTACTGCTT CTCCTAGGTA TATAAACACA GATGATTACT TGGGTGGTTT TGAGAGGTCA AGCGTTGATG AAATGGTCTC
AACCGTAGAG CTGCAATATG AAAGTTGGTG TTCAGCCTAT GCTCCCATTG CAGTGGATAA AAATGATGGT GCCTCTGTTG
AGAAATTCCT TAGCTGCTTG AAAAGCATGG GTGGTGAAGT TGCACTCTCT TTAGCCAAAA CTGTGTTTTA CAGTGACTAC
AGAGACATGC TTGAGAAGGT TGAAATACCA TGCACCATCA TCCAATCAAG CAATGACATG GCAGTTCCAG TTGGCATAGG
GCAGTACTTG GAGAAGAAGA TCAAAGGGGT GGCCACTTTG GAGATTATAG ACATGATTGG CCATTTCCCT CAG

>Vigan.05G256600.01
ATGGCGGCAC CAGAAAAGAG GCTTTCAACA GGTTTAAATG CAAGAAGCAT AGGGTCAGGC AAGGAAACCA TAGTTTTGTG
TCATGGGTTT GGAACGGACC AATCGATATG GCACAAAATC ATTCCCCTTT TGGCAGAAAG TTACTCTCTG GTTCTCTTTG
ATTGGCCTTT TTCTGGGGCT GTGACTGATA AGAGCCTTTA TGAGCATGCC AAGTACACCT CCTTTGAACC TTATGCTGAT
GATTTGATCA CTGTCATAGA TGAGATGGAC CTCAACTCTG TCACTTTTGT TGGACATTCC ATGTCTGCTA TGATTGGTTG
CATTGCCTCC ATTAAAAGAC CTCACCTCTT CAATAATCTC ATTCTTGTTA CTGCTTCTCC TAGGTATATA AACACAGATG
ATTACTTGGG TGGTTTTGAG AGGTCAAGCG TTGATGAAAT GGTCTCAACC GTAGAGCTGC AATATGAAAG TTGGTGTTCA
GCCTATGCTC CCATTGCAGT GGATAAAAAT GATGGTGCCT CTGTTGAGAA ATTCCTTAGC TGCTTGAAAA GCATGGGTGG
TGAAGTTGCA CTCTCTTTAG CCAAAACTGT GTTTTACAGT GACTACAGAG ACATGCTTGA GAAGGTTGAA ATACCATGCA
CCATCATCCA ATCAAGCAAT GACATGGCAG TTCCAGTTGG CATAGGGCAG TACTTGGAGA AGAAGATCAA AGGGGTGGCC
ACTTTGGAGA TTATAGACAT GATTGGCCAT TTCCCTCAG

>Vigan.05G256600.01
MAAPEKRLST GLNARSIGSG KETIVLCHGF GTDQSIWHKI IPLLAESYSL VLFDWPFSGA VTDKSLYEHA KYTSFEPYAD
DLITVIDEMD LNSVTFVGHS MSAMIGCIAS IKRPHLFNNL ILVTASPRYI NTDDYLGGFE RSSVDEMVST VELQYESWCS
AYAPIAVDKN DGASVEKFLS CLKSMGGEVA LSLAKTVFYS DYRDMLEKVE IPCTIIQSSN DMAVPVGIGQ YLEKKIKGVA
TLEIIDMIGH FPQ