GBrowse Details

Vigan.05G265800.01

Basic Information:
Name: Vigan.05G265800.01
Multiple alignment
Variant Information
Position: Chr05:34505880..34509468 (+ strand)
Length: 3589
Functional Information:
Description: Similar to N-acetyltransferase 9-like protein-like. [XP_004502183.1, Cicer arietinum]
GO: Molecular Function: N-acetyltransferase activity (GO:0008080)
InterPro: GNAT domain (IPR000182)
Acyl-CoA N-acyltransferase (IPR016181)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:12.17,10.37,8.94,7.98,10.24,11.85,4.02,6.41
Arabidopsis thaliana homolog: AT2G04845.1
Automatic updates:
Name: NM_001255891 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max N-acetyltransferase 9-like (LOC100817900), transcript variant 3, mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr05:34505880..34506008 (+ strand)
Length: 129
Type: five_prime_UTR
Position: Chr05:34506009..34506216 (+ strand)
Length: 208
Type: CDS
Position: Chr05:34506311..34506382 (+ strand)
Length: 72
Type: CDS
Position: Chr05:34506458..34506545 (+ strand)
Length: 88
Type: CDS
Position: Chr05:34507443..34507575 (+ strand)
Length: 133
Type: CDS
Position: Chr05:34507839..34507877 (+ strand)
Length: 39
Type: CDS
Position: Chr05:34508981..34509061 (+ strand)
Length: 81
Type: CDS
Position: Chr05:34509062..34509468 (+ strand)
Length: 407
Type: three_prime_UTR


>Vigan.05G265800.01
GTTGGATTTG AGAGTGGTAA GCGGGTCCCG TGATGGGTCG AATACACGAA ACATTTAAAC AAACACGTGG TGGACAGAGA
AGAAGGTGGC GTAACATAAC TTGTGAGTGA TTTGCGTTGG AGGTTGAGAA TGGATGCGAT GGAAGAGAGT GAGACAGGGA
AAGGGAGTGT GAGCTTAGAG GGAGAGAAGG TGATATTGGT CCCTTACATG GAAGCCCATG TCCCCAAATA TCACCAATGG
ATGAAGGACC CTTCTCTCCT TCAGGCCACT GCCTCCGATC CTCTTACCCT TCAGCAGGAG TACCAAATGC AGCTCTCATG
GTTCCAAGAC CCTTCCAAGG AGACCTTCAT TGTACTGGAC AAGGACTTGG TTGTTGGACA ATTCTCGCAC GGGGAACCCC
ACCTCGAAGC CATGGTTGGT GATGTAAATC TGTTCATGAA TGATTTGGAT GATCCTCACG TGGCAGAGGT TGAAATAATG
ATTGCAGAAC CAAAGAGCCG TAGGAAGGGA CTTGGGAAGG AGTCTGTTCT GATGATGATG ACCTTTGCTA TCGAGAAGTT
AGGAATTAAT ATGTTTCTGA CTAAAATTGC AGACTCAAAT GGAGCATCCC TTGACATGTT CAAAAAATTG GGGTTTGTGC
AAACTTCATA TAGCAACATC TTCAAGGAGG TCACTTTGGA GTTACAAGTA ACACAGCCCA AGAAAGAGGA GATGCTTGGT
TTAATGAAAA TGATAATCAA ACATACATAA AAGTAGCAAT ATCACTTCCA GTTTATTTAA TGGTAATAGA ATGATATCTT
CTGTTGCTAT ACTTGTTTTG TGATGTCTGG TTAAAGTGTA ACTATACTAA ATTCTGACAT TATTCATATA ACTCTAACCC
TGTCTAAGTG TAATAATCTG GAGCTATATT AACGGCGAAG GTATTTAGCG TGTTTATGTT TTTCTTTTTC TTTTAAATGA
GAAGAACAGA CCCGGTGTTT ATGTTTTTCT TTTTCTTTTA AATGAGAAGA ACAGACCCGA TGCAGACGAG AAAAGGCTTC
TGAATTATTT GATTTTTGGT TTTTTAAAGT ATGTTTTAAC TTTAAGTATG TTAAGATAGC ACAATCTGGA GTGGATGTAT
CAGAATAAAC TTCTTAGTCG AGAATAAAAA GTAGGAG

>Vigan.05G265800.01
ATGGATGCGA TGGAAGAGAG TGAGACAGGG AAAGGGAGTG TGAGCTTAGA GGGAGAGAAG GTGATATTGG TCCCTTACAT
GGAAGCCCAT GTCCCCAAAT ATCACCAATG GATGAAGGAC CCTTCTCTCC TTCAGGCCAC TGCCTCCGAT CCTCTTACCC
TTCAGCAGGA GTACCAAATG CAGCTCTCAT GGTTCCAAGA CCCTTCCAAG GAGACCTTCA TTGTACTGGA CAAGGACTTG
GTTGTTGGAC AATTCTCGCA CGGGGAACCC CACCTCGAAG CCATGGTTGG TGATGTAAAT CTGTTCATGA ATGATTTGGA
TGATCCTCAC GTGGCAGAGG TTGAAATAAT GATTGCAGAA CCAAAGAGCC GTAGGAAGGG ACTTGGGAAG GAGTCTGTTC
TGATGATGAT GACCTTTGCT ATCGAGAAGT TAGGAATTAA TATGTTTCTG ACTAAAATTG CAGACTCAAA TGGAGCATCC
CTTGACATGT TCAAAAAATT GGGGTTTGTG CAAACTTCAT ATAGCAACAT CTTCAAGGAG GTCACTTTGG AGTTACAAGT
AACACAGCCC AAGAAAGAGG AGATGCTTGG TTTAATGAAA ATGATAATCA AACATACATA A

>Vigan.05G265800.01
MDAMEESETG KGSVSLEGEK VILVPYMEAH VPKYHQWMKD PSLLQATASD PLTLQQEYQM QLSWFQDPSK ETFIVLDKDL
VVGQFSHGEP HLEAMVGDVN LFMNDLDDPH VAEVEIMIAE PKSRRKGLGK ESVLMMMTFA IEKLGINMFL TKIADSNGAS
LDMFKKLGFV QTSYSNIFKE VTLELQVTQP KKEEMLGLMK MIIKHT*