GBrowse Details

Vigan.06G003600.01

Basic Information:
Name: Vigan.06G003600.01
Multiple alignment
Variant Information
Position: Chr06:404784..411218 (- strand)
Length: 6435
Functional Information:
Description: Similar to Uncharacterized protein. [I1LVH2, Glycine max]
GO: Biological Process: signal transduction (GO:0007165)
Cellular Component: intracellular (GO:0005622)
InterPro: Rho GTPase-activating protein domain (IPR000198)
Rho GTPase activation protein (IPR008936)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:25.91,12.63,16.25,19.08,8.45,13.13,24.21,17.52
Arabidopsis thaliana homolog: AT5G61530.1
Structure :
Position: Chr06:404784..405714 (- strand)
Length: 931
Type: three_prime_UTR
Position: Chr06:405715..405860 (- strand)
Length: 146
Type: CDS
Position: Chr06:407954..408119 (- strand)
Length: 166
Type: CDS
Position: Chr06:408586..408830 (- strand)
Length: 245
Type: CDS
Position: Chr06:408915..408992 (- strand)
Length: 78
Type: CDS
Position: Chr06:409124..409222 (- strand)
Length: 99
Type: CDS
Position: Chr06:409480..409498 (- strand)
Length: 19
Type: CDS
Position: Chr06:409581..409643 (- strand)
Length: 63
Type: CDS
Position: Chr06:410139..410401 (- strand)
Length: 263
Type: CDS
Position: Chr06:410631..410691 (- strand)
Length: 61
Type: CDS
Position: Chr06:410692..411218 (- strand)
Length: 527
Type: five_prime_UTR


>Vigan.06G003600.01
TGGTGAGTTA ATCTTGGGAC TGAGTCAGAG CAGTCGCCTT CCAATACCCA TATCTCTGTC TTGTCATCTG CTGCCGTCTT
TTCTCAGAAC TGCAATTTCT CTCTCTGTTT CTTTCAGCTT TGGCGCAAAA TCATAAAAAA GTTTTCACCT TTCTTCTCTC
TAATTTGTTC AGGTAACAAG TAGGTTTTTC AATTCCTTCA TTTTTCCATC AGATTCTCTT CTTTCGTTTT CGTTGTTCGA
GACTACTGAC TAGCCGTAGA AGCCCGATCG TTTCTCTTCC TTGGCTTTTA CTGCACACGC TAGTTGTTGT TGCTGTGATT
TCTCTCGTGT AAAATTATTT TTTTATTGGT TTGATTTTCG AGGAAATCGA TGATCGGAAA GCTGTCAACT AACTTTATTC
TATTTCTGAA GGACTGGGAT CCTGTTCCTG ACTAGAATTT TGTCAATTGT CGTTGTTGAC TCGTGTTTTG GGTTCATGTG
CAGGATCAAG TAACGACTTT TGAGTTTGTT CTTGACCGCT GTCTTCCATG CCTTCGATCA TGTCACCCCA GTGGCAAGAC
AAGGCAGCTG GTTTCTTTTC TTCCTCCGGA GTCAAGCTTA AAGAAGCCAA GGAATCAGCA GGAACATTTG TTGGTGAGGT
CACCAAAGAT ACAAAAAGCA ATGTGACTGA AGTGGCTGGA CGAGTGGGGT CAATGGTCAA GAGTCGGTGG GCACTTCTCC
AGCAGCCATC CACAAGACAT GCTGTGCAGG ATCGCTTGAT ATCAGCAGCT GCTACAACTG GCTCGCTCCT GAGGAGAGGC
TTGTCTGGGA CAAAGGATAA GGTGGTTGTG GGAAAGTCCA AGGTTGAAGA GGTGGCAAAA ATTACAGCAC AAAAAAGTAA
GACTATCTTG ACAGATATTG AAAGATGGCA AAAGGGAGTT GCAAGCACTG ATGTATTTGG AGTTCCAATT GAGGTTACTG
TGCAGAGGCA AGATTACTGC AAACCTATTC CTCGGATATT GGTCAATTGT GCAGATTATC TTATAGTTTC AGGTTTGAAC
TCGCCAGATC TTTTTAAATC TGAAGGGAAT AAAAAGGTTA TTCACCAATT GGTTTCCCTA TACAACCAAG ATTCTAATGC
TTCAATACCA GAAGGCACGA ATCCCCTTGA TGTAGCAGCT CTTGTGAAAT ATTACCTTGC TAGCCTTCCT GAGCCACTTA
CCACATTAGA GCTTTATAAT GAGATTAGAG GTGCTCGGTC CAGCATATAC TCCATGAGAA ACATACTCAA GAGGCTTTCC
AGTATAAACT ACATGACCCT AGAGTTTATA ACCGCCCTTC TACTCCGAGT TAGCCAGAAG TCACTTCTCA ACAAGATGGA
TGCTCGGAGC TTAGCTATGG AAATGGCACC TGTTATTATG TGGCAAAAGG AAAACAGACC TGAATTTTAT CGTCAATATT
GGAATCAGAT GTCAAGAAGT CCTTCCGAAA AGAGTGTGGA TACACCACCT GGTTCATTTG CTGCCTGGGA CATGCTTTCC
GATGATGGTG AAGCCATAGA CGCATCCTCT CCTATTCCTT TGGATGATGG CACGCCAGTA GACTTTGGTG CAATTGAAGT
TATTCAGTTG CTCGTGGAGC ATCATAATGC AATCTTCACA GATGCAAATG AGACAGTTTG GAAATGAATT GTTTTACTCC
TCTTCCTGTA TTTGTTGGCT GACTTGGATA TATTGGTCTA GGAATATTTT TTTCCCGATC TGGTCAAGAA GATCATTCTT
AAGAAGCTAT ATTTGAAGTT ATCCACAATC ATTTAGCTGC AAAATGATGT TTGGATATTA CCGGTCGGTT CTAGTGATAA
GAGTATTTGT TTTTCAATTT ATTTTGCTTT TAGAGAGTGA CGATTTTACT TCACGAGAAA TGTTAGTGAC ACTTGTATAA
CACACTCTTC GTAACACACA CTCTATGATT GGTTAAAATT TGTTGAAAAC TACTGAAAGA GAATCATTAA ATGAGTAGTT
TGACCCATCA AAATTTGTGA ATTCCCACAA AATTCAATCA ATAGTAGAGT GTGTTCAAGA GTGTGTTAGG AATCAGTGTT
GGTATACCGC TTCATATATG TGGGGGTAAA AGTAGCAAAC TTTGTACAGC CATAATTGCA GAAATTATTG TCACTCGTGT
GCTCTGTTAT CATGGTCTTT TGAGTGGATT GATGATATGC GATCTTTGTT TATAGTTACG TATAGAATTG TGTATTCGTA
TTTGGTACAC TGTACTTGAA TGGATCATTT AAATACTATC CCTGATTGTT GGAATGCTGC GAAAGGGATG AAGTTTGATT
TGAGGAGCTG CTGAAGTAAA TACCAAGATT TTTCATTTTT TCTTTCCAAA CTGGAGATTT ATAGTTCATT TTTACTTAGG
ATCTTAGAAT TCAGTGTACA TAAATGCCTG TTTTTTGGGG GGCCATACTA GAGCATAGTC AAAGGCTATT CTGTTCATAT
TGCAACTAAA CAGGATGCAG TATAAAATGA AAAGATTCTG AAGACCGTTC CATGTCATGT ATATAGCCTT TGAGGAACAA
GATAGGTTCT ATTTGCTTTT TGTTTGTTTC TGGTTGAT

>Vigan.06G003600.01
ATGCCTTCGA TCATGTCACC CCAGTGGCAA GACAAGGCAG CTGGTTTCTT TTCTTCCTCC GGAGTCAAGC TTAAAGAAGC
CAAGGAATCA GCAGGAACAT TTGTTGGTGA GGTCACCAAA GATACAAAAA GCAATGTGAC TGAAGTGGCT GGACGAGTGG
GGTCAATGGT CAAGAGTCGG TGGGCACTTC TCCAGCAGCC ATCCACAAGA CATGCTGTGC AGGATCGCTT GATATCAGCA
GCTGCTACAA CTGGCTCGCT CCTGAGGAGA GGCTTGTCTG GGACAAAGGA TAAGGTGGTT GTGGGAAAGT CCAAGGTTGA
AGAGGTGGCA AAAATTACAG CACAAAAAAG TAAGACTATC TTGACAGATA TTGAAAGATG GCAAAAGGGA GTTGCAAGCA
CTGATGTATT TGGAGTTCCA ATTGAGGTTA CTGTGCAGAG GCAAGATTAC TGCAAACCTA TTCCTCGGAT ATTGGTCAAT
TGTGCAGATT ATCTTATAGT TTCAGGTTTG AACTCGCCAG ATCTTTTTAA ATCTGAAGGG AATAAAAAGG TTATTCACCA
ATTGGTTTCC CTATACAACC AAGATTCTAA TGCTTCAATA CCAGAAGGCA CGAATCCCCT TGATGTAGCA GCTCTTGTGA
AATATTACCT TGCTAGCCTT CCTGAGCCAC TTACCACATT AGAGCTTTAT AATGAGATTA GAGGTGCTCG GTCCAGCATA
TACTCCATGA GAAACATACT CAAGAGGCTT TCCAGTATAA ACTACATGAC CCTAGAGTTT ATAACCGCCC TTCTACTCCG
AGTTAGCCAG AAGTCACTTC TCAACAAGAT GGATGCTCGG AGCTTAGCTA TGGAAATGGC ACCTGTTATT ATGTGGCAAA
AGGAAAACAG ACCTGAATTT TATCGTCAAT ATTGGAATCA GATGTCAAGA AGTCCTTCCG AAAAGAGTGT GGATACACCA
CCTGGTTCAT TTGCTGCCTG GGACATGCTT TCCGATGATG GTGAAGCCAT AGACGCATCC TCTCCTATTC CTTTGGATGA
TGGCACGCCA GTAGACTTTG GTGCAATTGA AGTTATTCAG TTGCTCGTGG AGCATCATAA TGCAATCTTC ACAGATGCAA
ATGAGACAGT TTGGAAATGA 

>Vigan.06G003600.01
MPSIMSPQWQ DKAAGFFSSS GVKLKEAKES AGTFVGEVTK DTKSNVTEVA GRVGSMVKSR WALLQQPSTR HAVQDRLISA
AATTGSLLRR GLSGTKDKVV VGKSKVEEVA KITAQKSKTI LTDIERWQKG VASTDVFGVP IEVTVQRQDY CKPIPRILVN
CADYLIVSGL NSPDLFKSEG NKKVIHQLVS LYNQDSNASI PEGTNPLDVA ALVKYYLASL PEPLTTLELY NEIRGARSSI
YSMRNILKRL SSINYMTLEF ITALLLRVSQ KSLLNKMDAR SLAMEMAPVI MWQKENRPEF YRQYWNQMSR SPSEKSVDTP
PGSFAAWDML SDDGEAIDAS SPIPLDDGTP VDFGAIEVIQ LLVEHHNAIF TDANETVWK*