GBrowse Details

Vigan.06G013100.01

Basic Information:
Name: Vigan.06G013100.01
Multiple alignment
Variant Information
Position: Chr06:1276492..1278884 (- strand)
Length: 2393
Functional Information:
Description: Hypothetical protein.
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.11,0.43,0.53,1.49,30.36,4.87,110.77,16.80
Arabidopsis thaliana homolog: AT2G16385.1
Automatic updates:
Name: NM_001249736 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100500603 (LOC100500603), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr06:1276492..1276662 (- strand)
Length: 171
Type: three_prime_UTR
Position: Chr06:1276663..1276803 (- strand)
Length: 141
Type: CDS
Position: Chr06:1278004..1278059 (- strand)
Length: 56
Type: CDS
Position: Chr06:1278662..1278743 (- strand)
Length: 82
Type: CDS
Position: Chr06:1278744..1278884 (- strand)
Length: 141
Type: five_prime_UTR


>Vigan.06G013100.01
CCAACACTTA CTTTCAAAAT TAAACTGTCA ACTTCAGTTT TTCCTTCAAA AGGCTTCCTC TGTGGGGAAT TTATTGTTCC
TTGCAATATA CATAGGAAAC ACCATTTAAC TTCAAACCTA GAAAAATTCA AACTTGCACA AATGGGTACT CTCATGCTTC
TCAAGAACTT CATCCTCCTC TTTCTTCTAA TCTCTGCATC ATTTCTATCA CCATCTTTTG CAGCTAGACG ATCCAAGGAT
ATCAGGAACT TCACGAAAGA TGTGAATGCA ATTCAAGAGG GAACACCAAG GAAGGCACTG AATAAAGAAG AAGTAAGAAG
CATCCATGAG AGGCTTCTTA GGGCTAACAC AAAAGACTAT GGAAGATATG ATCCATCACC ATCTCTTTCA AAGCCTCCTT
TCAAGCTCAT ACCCAATTAA CTTAACTCCA ATCAATATTA TGAGAATCTT GGAAGTTGGT GTATTGGCAT AAAGTACCAT
AAATAATGTG TTGTTATCTT AATCATGTAA CATATAGTAT GTCATATAGA AAAAGAAATA CGGTTGGAAC CCTAGTAAGT
TAGTATCATA ATTATATATA TAATAGATCT A

>Vigan.06G013100.01
ATGGGTACTC TCATGCTTCT CAAGAACTTC ATCCTCCTCT TTCTTCTAAT CTCTGCATCA TTTCTATCAC CATCTTTTGC
AGCTAGACGA TCCAAGGATA TCAGGAACTT CACGAAAGAT GTGAATGCAA TTCAAGAGGG AACACCAAGG AAGGCACTGA
ATAAAGAAGA AGTAAGAAGC ATCCATGAGA GGCTTCTTAG GGCTAACACA AAAGACTATG GAAGATATGA TCCATCACCA
TCTCTTTCAA AGCCTCCTTT CAAGCTCATA CCCAATTAA

>Vigan.06G013100.01
MGTLMLLKNF ILLFLLISAS FLSPSFAARR SKDIRNFTKD VNAIQEGTPR KALNKEEVRS IHERLLRANT KDYGRYDPSP
SLSKPPFKLI PN*