GBrowse Details

Vigan.06G113700.01

Basic Information:
Name: Vigan.06G113700.01
Multiple alignment
Variant Information
Position: Chr06:22004429..22010335 (+ strand)
Length: 5907
Functional Information:
Description: Similar to Uncharacterized protein. [I1LSG9, Glycine max]
GO: Biological Process: oxidation-reduction process (GO:0055114)
Molecular Function: cysteamine dioxygenase activity (GO:0047800)
InterPro: RmlC-like cupin domain (IPR011051)
Cysteamine dioxygenase (IPR012864)
RmlC-like jelly roll fold (IPR014710)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:1.70,0.81,1.97,1.08,135.98,6.05,4.02,2.61
Arabidopsis thaliana homolog: AT2G42670.2
Automatic updates:
Name: NM_001254613 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max 2-aminoethanethiol dioxygenase-like (LOC100805101), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr06:22004429..22005816 (+ strand)
Length: 1388
Type: five_prime_UTR
Position: Chr06:22005817..22005919 (+ strand)
Length: 103
Type: CDS
Position: Chr06:22006722..22006867 (+ strand)
Length: 146
Type: CDS
Position: Chr06:22006980..22007127 (+ strand)
Length: 148
Type: CDS
Position: Chr06:22009492..22009695 (+ strand)
Length: 204
Type: CDS
Position: Chr06:22009787..22009905 (+ strand)
Length: 119
Type: CDS
Position: Chr06:22009906..22010335 (+ strand)
Length: 430
Type: three_prime_UTR


>Vigan.06G113700.01
AAAAAAATTG AATCTTTATT CCCTATTTGA AGGATAAAGT TATGTAAAAC TATTGTACCA TGCTGGTTCG TTACACCTTG
TAGACAGGAA ATGAGAGGCA CGTTTGTCAT TTTCCTTTTA ACAGCTGTGA AAAACATACG AAAGAAAAAA GGTGGTCGGG
GAACAGCTGG ACTTCAAAAA CGGCTCAAAA AATCTCACAA AAGGCAAACC TGCAATTCCT TTTCTCAATT TTTTTTTTCA
TTTCAACCAA ACAGAAAATA AAACACACAC ACACTGATGA CGTGTCCAAG ATCTTCCTTG GGCCTTTTTC TTTTCACCTC
CAACCCTTTC ACAGTCACAA CAACGATCCC TCTCTTCATC CTTCTATGCA CGTCCATTCA TCTTCCTTCA ACAGCCCCTT
CATCTTCTTC TTCTCATTCC TCTGCTAATC CACCATGTTC CTCACCCTTT TCTCTCTCTA ATCATGCCTC TCCCAGGTAC
CTTCTTCTTC TGCATCTCCC ACCCTTCCCC TTCTTCTGTC GGAATCTCAT TTGCCCCATT TCAGATTTTG ATCCAAAATC
CCTTTTTGAT CACTTTGCTC GCCCTTTCAC CTCGCTACTT CTGTGGGGTC ACTCTCTATT TCTCGTTTTG GAAATCTTCC
CTGCTTTAAT TAATTAACTA GCGGTGTTCA TGTTGTTTAT GACGCAAATA AATAAAAAAA TAAATAAAAA TTTGTGTTTT
GTTCTTGGAA TATCACATTG GGTTCTGGGA GGTGTGCTTT ATGGAGTGGA AGTTATGGAG AGTCTCACGT TGGTTTTATC
TGTGCTGGGT TTTACTTAAT TTTGATCTAA AAGTGAGTTC CTTTTGGTGA ATGTATATAA TAATAGTGGA GTAAAGAGTG
GATGCACCAA CTGATCCAAT CATAAATCAT CATGTATGGT GTGGTTTGTT AATTTTACCA TAAATACCTT AAAAGTAATG
AGTTGACAGT GTGAGCTTTT TTATACTGAT AATGTAACTT TTGCAATGAT TGCCTCAAAA TGCAATTGAT TGTTAATGCT
TTTGAATGAA TTGACGGGGA TTCTATTGGC TATATCGGTA TTACTTCGTG ATCTGTGGTT GCACTTGCTG TGATATGTCT
ATATTTGAAG TAGAGGTCAT TGATTTTTGG CTCGTTATTG CTTTTTCCTT GTTCAATAGA TCCATTAGTT TGAATTGTTG
CGAAGGAAAC ATTACGACCA TGCAGATTCA TTACCGATGG TTTGATTCTG AGGCTAAAAT ACGGTTGTTA TCTAATTGTA
TATCCAGTCC CTATTGCAAT CAGTAAGCCA CTTACAAGGT GTTATCAGCT TGCTGACCCT GGGGATTTTG GTCCGAGTGA
ATAGATAACT TGGTCTCAAG TTTGCAAGAT GCCATATTAT ATACAGAGAC TTTATAGGCT ATGCAATGCA TCCTTTTCAT
CTGATGGACC TGTGTCGGAA GAGGTCATTG AGAAAGTTCG TGAGAAGTTA GAGAGAATCA AGCCGTCAGA TGTAGGTCTT
GAACAAGAAG CACAACTAGT TCGGAATTGG CCTGGTCCAG CACTTGAACG TAATGGGAGC CATCAATCCT TGCCACCTAT
AAAATATTTG CATTTGCATG AATGTGACTC CTTCTCTATA GGAATTTTTT GCATGCCCCC CTCGTCTATC ATTCCTCTCC
ATAATCATCC TGGAATGACA GTGTTGAGCA AGTTGTTGTA TGGCTCAATG CATGTTAAAT CCTATGATTG GATCGATGCA
TCTGGCTCTC CTGATCAATC TGAAGTTCGA CCTGCAAAGC TTGTGAAAGA TACTGATATG ACAGCACCAA GCCCCACAAC
AGTTCTTTAC CCCACCAGTG GAGGAAACAT CCATTGTTTT AGAGCTATAA CTCCTTGTGC TATCTTTGAC ATATTGTCTC
CTCCTTACTC TTCAGAGCAT GGAAGACACT GCACCTACTT CCGGCGATCC CAACGGAGAG ATCTCCCAGT TAATGTTGAG
TTGGATGGAG TGACGGTTTC TGAAGTGACT TGGTTAGAAG AGTTTCAACC TCCTGATGAC TTTGTGATCC GGAGAGGACT
GTACAGGGGT CCAGTTATTA GAACTTGAAA AATTTTCTTC TTTGATGTGT CTTACACAAA AAGGAAATTG GCTTATCTTT
AGAATACAAC AAAGGGAACA GTGGAATGTG CAATAATTAT TATATTCTTT GTCTATGTAT GTGAGTCACT GGAGTGTGTA
CATAATGATG CACTAGTGTA ATCTATTTAC AGACCTCAAA AGTAATCCAG TAGAATAGTT ACGTAATGTT GAAAAAGTTC
TTGCTAGTGG CCATATCAAA ATCTGTTTTC ATGGAGAACA AAAGGGTGCT GTGATTTGGT TACTGTTTAT AGTAACATTC
TGTCATGTTC AGGCTTCTAA TAGTACAAGG TTCTTACATG CGTGTTGACT ATAATGACAC TATTGCACAT GCGTGTTGGC
TAAATCATGC TTTATAAAAC ATCTATGAAA GTCAACGGAT ACGAAATTTT AGATCACA

>Vigan.06G113700.01
ATGCCATATT ATATACAGAG ACTTTATAGG CTATGCAATG CATCCTTTTC ATCTGATGGA CCTGTGTCGG AAGAGGTCAT
TGAGAAAGTT CGTGAGAAGT TAGAGAGAAT CAAGCCGTCA GATGTAGGTC TTGAACAAGA AGCACAACTA GTTCGGAATT
GGCCTGGTCC AGCACTTGAA CGTAATGGGA GCCATCAATC CTTGCCACCT ATAAAATATT TGCATTTGCA TGAATGTGAC
TCCTTCTCTA TAGGAATTTT TTGCATGCCC CCCTCGTCTA TCATTCCTCT CCATAATCAT CCTGGAATGA CAGTGTTGAG
CAAGTTGTTG TATGGCTCAA TGCATGTTAA ATCCTATGAT TGGATCGATG CATCTGGCTC TCCTGATCAA TCTGAAGTTC
GACCTGCAAA GCTTGTGAAA GATACTGATA TGACAGCACC AAGCCCCACA ACAGTTCTTT ACCCCACCAG TGGAGGAAAC
ATCCATTGTT TTAGAGCTAT AACTCCTTGT GCTATCTTTG ACATATTGTC TCCTCCTTAC TCTTCAGAGC ATGGAAGACA
CTGCACCTAC TTCCGGCGAT CCCAACGGAG AGATCTCCCA GTTAATGTTG AGTTGGATGG AGTGACGGTT TCTGAAGTGA
CTTGGTTAGA AGAGTTTCAA CCTCCTGATG ACTTTGTGAT CCGGAGAGGA CTGTACAGGG GTCCAGTTAT TAGAACTTGA


>Vigan.06G113700.01
MPYYIQRLYR LCNASFSSDG PVSEEVIEKV REKLERIKPS DVGLEQEAQL VRNWPGPALE RNGSHQSLPP IKYLHLHECD
SFSIGIFCMP PSSIIPLHNH PGMTVLSKLL YGSMHVKSYD WIDASGSPDQ SEVRPAKLVK DTDMTAPSPT TVLYPTSGGN
IHCFRAITPC AIFDILSPPY SSEHGRHCTY FRRSQRRDLP VNVELDGVTV SEVTWLEEFQ PPDDFVIRRG LYRGPVIRT*