GBrowse Details

Vigan.06G117000.01

Basic Information:
Name: Vigan.06G117000.01
Multiple alignment
Variant Information
Position: Chr06:22887585..22898474 (+ strand)
Length: 10890
Functional Information:
Description: Similar to Uncharacterized protein. [I1K3S7, Glycine max]
GO: Biological Process: proteolysis (GO:0006508)
Biological Process: negative regulation of catalytic activity (GO:0043086)
Molecular Function: serine-type endopeptidase activity (GO:0004252)
Molecular Function: identical protein binding (GO:0042802)
InterPro: Peptidase S8/S53 domain (IPR000209)
Protease-associated domain, PA (IPR003137)
Proteinase inhibitor I9 (IPR010259)
Peptidase S8, subtilisin-related (IPR015500)
Peptidase S8, subtilisin, Ser-active site (IPR023828)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.21,0.14,6.09,16.45,0.10,0.23,5.08,2.43
Arabidopsis thaliana homolog: AT1G04110.1, AT2G04160.1, AT2G05920.1, AT3G14067.1, AT3G14240.1, AT4G34980.1, AT5G45650.1, AT5G51750.1, AT5G59810.1, AT5G67360.1
Automatic updates:
Name: NM_001280566 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max SUB1 homolog (S. cerevisiae) (SUB1), mRNA.
PubMed ID: 23235880 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr06:22887585..22887710 (+ strand)
Length: 126
Type: five_prime_UTR
Position: Chr06:22887711..22887797 (+ strand)
Length: 87
Type: CDS
Position: Chr06:22887886..22888001 (+ strand)
Length: 116
Type: CDS
Position: Chr06:22888093..22888190 (+ strand)
Length: 98
Type: CDS
Position: Chr06:22888276..22888440 (+ strand)
Length: 165
Type: CDS
Position: Chr06:22889541..22889649 (+ strand)
Length: 109
Type: CDS
Position: Chr06:22893907..22894441 (+ strand)
Length: 535
Type: CDS
Position: Chr06:22896578..22896672 (+ strand)
Length: 95
Type: CDS
Position: Chr06:22896826..22897071 (+ strand)
Length: 246
Type: CDS
Position: Chr06:22897178..22897292 (+ strand)
Length: 115
Type: CDS
Position: Chr06:22897381..22897594 (+ strand)
Length: 214
Type: CDS
Position: Chr06:22897723..22898273 (+ strand)
Length: 551
Type: CDS
Position: Chr06:22898274..22898474 (+ strand)
Length: 201
Type: three_prime_UTR


>Vigan.06G117000.01
ATTAATTTCA TTGATTAGTA ATAAAAGAAA AAAGTCTCAA CCTAAGGTTG TTACCTTATA TAAGGTTTCT TTTTCATTAA
AAACAAGGAC AAAAGCGAAG GAGAACCTTC CTAGATAGGG TAAGCAATGA GGCTACCAAG TTCAACCATC CAGCTTCTCT
ACCAAATTCT TCTTGTTTGT CTACTGAACA GACCCAGCTT TGCAGTGAAA AAGTCATATG TGGTGTACTT GGGAGCTCAC
TCACATGGCC CAGAATTATC TTCATCTTTC GTTGACTTCA ATCAAGTGAC ACAGTCACAC CATGAGTTTC TGGGATCTTA
CTTAGGAAGT CCTAATACAG CCAAGGACTC CATCTTTTAC TCATACACAA GACACATCAA TGGTTTTGCT GCAACTTTGG
AAGAAGATGT AGCTGCCGAG ATAGCAAAGC ACCCCAAAGT GCTATCAGTG TTTGAGAACA GAGGAAGAAA GCTACACACC
ACTCGATCAT GGGAATTCAT GGGGCTAGAG CATAAAGGCA TGATCCCATC TGGGTCAATC TGGAAGAAAG CCAGATTTGG
TGAAGGAGTC ATAATTGGAA ACCTGGATAC AGGTGTTTGG CCTGAATCAA ATAGCTTTAG TGAAGAAGGA TTGGGACCAA
TTCCATCAAA GTGGAGAGGA ATATGTGACA ATGGACTTGA TCATACTTTT CAATGCAACA GGAAGCTAAT CGGTGCAAGG
TACTTTAACA AGGGCTACGC CTCGACAGTG GGCCCACTCA ACTCTTCCTT TCAGTCCCCA CGTGACAAGG AGGGCCATGG
CTCCCATACT CTCTCCACAG CTGGTGGCAA CGCCGTTCCT GGAGTTAGCG TCTTCGGCCA GGGCTTCGGA ACAGCCAAGG
GCGGCGCGCC CAAAGCCCGC GTGGCGGCGT ACAAGGTCTG CTGGCCCCCC GTTGCCGATG ATGAGTGCTT CGATGCTGAT
ATCTTGGCCG CGTTTGACGA GGCCATCCAC GACGGTGTGG ACGTGCTGTC AGTGTCGCTC GGTGGGTCCG CCTCAAGCCT
GCTCAATGAC AGCGTAGCGA TTGGATCATT CCATGCCGCG AGTCGAGGAA TCGTGGTGGT TTGCTCCGCC GGGAATAGTG
GGCCTGCCGA TGCCACTGTG AGAAATCTTG CACCCTGGCA TGTCACGGTT GCCGCCAGCA CCATGGATAG AGAATTCCCA
GCTTATGTTG TCCTCGGTAA CAATATCACC TTGAAGGGTG AAAGCTTATC AGCTGCAAGA TTGGCACACA AGTTGTACCC
AATTATTAAA GCTACAGATG CTAAATTGGA CAGTGCAAGA ACAGAAGACG CGGTGCTGTG TCAGAACGGG ACCTTGGATC
CCAAAAAGGT GAAGGGAAAG ATCGTGATAT GTCTCCGAGG GATAAATGCG AGAGTGGACA AAGGAGAGCA AGCTTTACTA
GCTGGTGCCG TGGGAATGGT CCTTGCTAAT AACAAGGCCA GTGGCAATGA AATTATAGCT GATCCTCATG TTCTTCCTGC
TTCTCATATC AATTTCACTG ACGGCATTTC TGTCTTCAAT TACGTCAACT CAACCAAGTT CCCAGTGGCG TATATTACAC
ATCCAAAGAC TCAATTAGGT ACTAAGCCAG CACCGTTCAT GGCTGCTTTT TCATCTAAAG GGCCAAATAC TGTCGTGCCA
GAGATCCTAA AGCCTGATGT CACCGCACCG GGAGTGTCAA TTATAGCAGC CTATACTAAA GCCCAAGGAC CAACCAATCA
AGTGTTTGAT AAGCGCCGGA TTTCGTATAA TTCAGTGTCA GGAACATCAA TGTCGTGCCC TCATGTTTCA GGCATTGCGG
CACTGTTGAG AGCATCGTAT CCTTCGTGGA GTCCTGCTGC TATTAAATCA GCAATCATGA CCACAGCCAC AACACTTGAT
AATGAAGTGG AGCCTCTGCT GAATGCTACT GATGGCATGG CAACACCATT CAGTTACGGG GCAGGACATG TACAACCAAA
CATAGCAATG GATCCCGGGT TAGTTTATGA CACAACAATT GGTGATTACC TAAACTTCTT ATGTGCTTTA GGATACAACG
GGACACAGAT CTCAGTGTTC ACAGAAGGTT CATCATATGT GTGCCGCAAG AAATTTAGTC TCCTCAACCT GAACTATCCC
TCAATCACTG TTCCGAATCT CTCTGGGTCA GTGACTGTTA CGAGGACATT GAAGAATGTT GGTTCTCCAA GCACGTACAT
TGCTCACGTT CAAAACCCGA ATGGGATCTC TGTTTCTGTG AAGCCAAGCA TCTTGAAGTT CACAAATGTT GGTGAAGAAA
AACGCTTTAA AGTAACCTTT AAGATCATGA AAGGAAAGGC TACGAATAAC TACGTGTTTG GAAAACTGAT ATGGTCAGAT
GGCAGACATT ATGTCAGGAG TCCAATAGTT GTGAAGGCTC TCACGAGTAG ATATTGAAGT AGGTGATGCA ATTGAGCTTA
ATTTGCACTG CTAAATGATT GGTAGAATTT TCTAAATTGT ATCATATATA TGTTCTAAAT TTATTCTTAT GATCTCTTGC
CACTGATAAA GAAACCTGCA AGTGGCTTTG AGCATATATT TTACTAGCTG TACTATTAGT ATGATTCCAA TGAGAAATAA
AACCTAACTC GTTCATCC

>Vigan.06G117000.01
ATGAGGCTAC CAAGTTCAAC CATCCAGCTT CTCTACCAAA TTCTTCTTGT TTGTCTACTG AACAGACCCA GCTTTGCAGT
GAAAAAGTCA TATGTGGTGT ACTTGGGAGC TCACTCACAT GGCCCAGAAT TATCTTCATC TTTCGTTGAC TTCAATCAAG
TGACACAGTC ACACCATGAG TTTCTGGGAT CTTACTTAGG AAGTCCTAAT ACAGCCAAGG ACTCCATCTT TTACTCATAC
ACAAGACACA TCAATGGTTT TGCTGCAACT TTGGAAGAAG ATGTAGCTGC CGAGATAGCA AAGCACCCCA AAGTGCTATC
AGTGTTTGAG AACAGAGGAA GAAAGCTACA CACCACTCGA TCATGGGAAT TCATGGGGCT AGAGCATAAA GGCATGATCC
CATCTGGGTC AATCTGGAAG AAAGCCAGAT TTGGTGAAGG AGTCATAATT GGAAACCTGG ATACAGGTGT TTGGCCTGAA
TCAAATAGCT TTAGTGAAGA AGGATTGGGA CCAATTCCAT CAAAGTGGAG AGGAATATGT GACAATGGAC TTGATCATAC
TTTTCAATGC AACAGGAAGC TAATCGGTGC AAGGTACTTT AACAAGGGCT ACGCCTCGAC AGTGGGCCCA CTCAACTCTT
CCTTTCAGTC CCCACGTGAC AAGGAGGGCC ATGGCTCCCA TACTCTCTCC ACAGCTGGTG GCAACGCCGT TCCTGGAGTT
AGCGTCTTCG GCCAGGGCTT CGGAACAGCC AAGGGCGGCG CGCCCAAAGC CCGCGTGGCG GCGTACAAGG TCTGCTGGCC
CCCCGTTGCC GATGATGAGT GCTTCGATGC TGATATCTTG GCCGCGTTTG ACGAGGCCAT CCACGACGGT GTGGACGTGC
TGTCAGTGTC GCTCGGTGGG TCCGCCTCAA GCCTGCTCAA TGACAGCGTA GCGATTGGAT CATTCCATGC CGCGAGTCGA
GGAATCGTGG TGGTTTGCTC CGCCGGGAAT AGTGGGCCTG CCGATGCCAC TGTGAGAAAT CTTGCACCCT GGCATGTCAC
GGTTGCCGCC AGCACCATGG ATAGAGAATT CCCAGCTTAT GTTGTCCTCG GTAACAATAT CACCTTGAAG GGTGAAAGCT
TATCAGCTGC AAGATTGGCA CACAAGTTGT ACCCAATTAT TAAAGCTACA GATGCTAAAT TGGACAGTGC AAGAACAGAA
GACGCGGTGC TGTGTCAGAA CGGGACCTTG GATCCCAAAA AGGTGAAGGG AAAGATCGTG ATATGTCTCC GAGGGATAAA
TGCGAGAGTG GACAAAGGAG AGCAAGCTTT ACTAGCTGGT GCCGTGGGAA TGGTCCTTGC TAATAACAAG GCCAGTGGCA
ATGAAATTAT AGCTGATCCT CATGTTCTTC CTGCTTCTCA TATCAATTTC ACTGACGGCA TTTCTGTCTT CAATTACGTC
AACTCAACCA AGTTCCCAGT GGCGTATATT ACACATCCAA AGACTCAATT AGGTACTAAG CCAGCACCGT TCATGGCTGC
TTTTTCATCT AAAGGGCCAA ATACTGTCGT GCCAGAGATC CTAAAGCCTG ATGTCACCGC ACCGGGAGTG TCAATTATAG
CAGCCTATAC TAAAGCCCAA GGACCAACCA ATCAAGTGTT TGATAAGCGC CGGATTTCGT ATAATTCAGT GTCAGGAACA
TCAATGTCGT GCCCTCATGT TTCAGGCATT GCGGCACTGT TGAGAGCATC GTATCCTTCG TGGAGTCCTG CTGCTATTAA
ATCAGCAATC ATGACCACAG CCACAACACT TGATAATGAA GTGGAGCCTC TGCTGAATGC TACTGATGGC ATGGCAACAC
CATTCAGTTA CGGGGCAGGA CATGTACAAC CAAACATAGC AATGGATCCC GGGTTAGTTT ATGACACAAC AATTGGTGAT
TACCTAAACT TCTTATGTGC TTTAGGATAC AACGGGACAC AGATCTCAGT GTTCACAGAA GGTTCATCAT ATGTGTGCCG
CAAGAAATTT AGTCTCCTCA ACCTGAACTA TCCCTCAATC ACTGTTCCGA ATCTCTCTGG GTCAGTGACT GTTACGAGGA
CATTGAAGAA TGTTGGTTCT CCAAGCACGT ACATTGCTCA CGTTCAAAAC CCGAATGGGA TCTCTGTTTC TGTGAAGCCA
AGCATCTTGA AGTTCACAAA TGTTGGTGAA GAAAAACGCT TTAAAGTAAC CTTTAAGATC ATGAAAGGAA AGGCTACGAA
TAACTACGTG TTTGGAAAAC TGATATGGTC AGATGGCAGA CATTATGTCA GGAGTCCAAT AGTTGTGAAG GCTCTCACGA
GTAGATATTG A

>Vigan.06G117000.01
MRLPSSTIQL LYQILLVCLL NRPSFAVKKS YVVYLGAHSH GPELSSSFVD FNQVTQSHHE FLGSYLGSPN TAKDSIFYSY
TRHINGFAAT LEEDVAAEIA KHPKVLSVFE NRGRKLHTTR SWEFMGLEHK GMIPSGSIWK KARFGEGVII GNLDTGVWPE
SNSFSEEGLG PIPSKWRGIC DNGLDHTFQC NRKLIGARYF NKGYASTVGP LNSSFQSPRD KEGHGSHTLS TAGGNAVPGV
SVFGQGFGTA KGGAPKARVA AYKVCWPPVA DDECFDADIL AAFDEAIHDG VDVLSVSLGG SASSLLNDSV AIGSFHAASR
GIVVVCSAGN SGPADATVRN LAPWHVTVAA STMDREFPAY VVLGNNITLK GESLSAARLA HKLYPIIKAT DAKLDSARTE
DAVLCQNGTL DPKKVKGKIV ICLRGINARV DKGEQALLAG AVGMVLANNK ASGNEIIADP HVLPASHINF TDGISVFNYV
NSTKFPVAYI THPKTQLGTK PAPFMAAFSS KGPNTVVPEI LKPDVTAPGV SIIAAYTKAQ GPTNQVFDKR RISYNSVSGT
SMSCPHVSGI AALLRASYPS WSPAAIKSAI MTTATTLDNE VEPLLNATDG MATPFSYGAG HVQPNIAMDP GLVYDTTIGD
YLNFLCALGY NGTQISVFTE GSSYVCRKKF SLLNLNYPSI TVPNLSGSVT VTRTLKNVGS PSTYIAHVQN PNGISVSVKP
SILKFTNVGE EKRFKVTFKI MKGKATNNYV FGKLIWSDGR HYVRSPIVVK ALTSRY*