GBrowse Details

Vigan.06G142000.01

Basic Information:
Name: Vigan.06G142000.01
Multiple alignment
Variant Information
Position: Chr06:26807381..26808738 (- strand)
Length: 1358
Functional Information:
Description: Similar to Uncharacterized protein. [I1LRW1, Glycine max]
GO: Molecular Function: DNA binding (GO:0003677)
Molecular Function: chromatin binding (GO:0003682)
InterPro: SANT/Myb domain (IPR001005)
Homeodomain-like (IPR009057)
Myb domain (IPR017930)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.00,0.00,0.35,0.97,1.91,0.00,0.07,0.59
Automatic updates:
Name: DQ822981 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max MYB transcription factor MYB122 (MYB122) mRNA, partial cds.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr06:26807381..26807522 (- strand)
Length: 142
Type: three_prime_UTR
Position: Chr06:26807523..26808198 (- strand)
Length: 676
Type: CDS
Position: Chr06:26808313..26808442 (- strand)
Length: 130
Type: CDS
Position: Chr06:26808543..26808675 (- strand)
Length: 133
Type: CDS
Position: Chr06:26808676..26808738 (- strand)
Length: 63
Type: five_prime_UTR


>Vigan.06G142000.01
CTTGTTTTCC AACATAGCCA AAATTTCCTC TTCCATTGAA ACGTAAAACA CTAACTCACA AAGATGGTGA GAACCCCATC
TTGTGACAAA AGTGGACTGA GAAAGGGTAC TTGGACTCCT GAGGAAGATA GAAAATTAAT TGCTTATGTT ACTAGATATG
GTTCCTGGAA TTGGCGCCAA CTTCCCAGGT TTGCAGGTCT GGCAAGATGT GGGAAAAGTT GTAGATTGAG ATGGATGAAT
TATCTGAGGC CTAACGTCAA AAGAGGGAAC TTCACTCCAC AGGAAGAAGA TTGCATCATA AGAATGCACA AAAAACTTGG
TAACAGGTGG TCGGCTATTG CGGCTGAGTT ACCAGGAAGA ACAGATAACG AAATAAAAAA CCATTGGCAC ACTACTCTGA
AGAAAAGGTC TGAACAAAAT ACAGTAACAA ATGAAGAAGC TAGAGCCTTC AAATCAAAGA ATAAAGAATC CAACCCAAAT
GGTTTTACTG TTACTCTTCC ATCCAATTCC GGGACTTCTG ATAATGCATC AGCCTCGGTC TCACCACTCT CATCCTCCAG
CAGCGTGTTT TCCTCCACAG CTTCAGATGA TTGCAGTGCT GCCAGCATGA AAAGTTTGGT TTTTGAAGAT GATGACTTTG
GTTTTCTGGA TTCATACATG GAGCCGATGA ACGAAAGTTT CTGGAGCGAG CTAAATCTGG ATGACATCTC CTACAGTGCA
GCATGTGAAA TACTGTCAGG AGATACCAGT GGCGCAATTC AAAGCACTGA TACTAACGTT CATGATTGTT GTGCAATGTC
TCCGCATGGA TCAAGCAGCG AAAGCATTGT TGTCGATAAT GGCTCTGGCA GTTTTCTCGA TGCATATGCA GAGGCAACAG
TTGAGAACTT TTGGATGCAG CCATATGTGG CTGACATGTC CCACGTTCCA AGCGAACTTC TTGTCCCTTC CGTTGTAGAA
TCTGAATATT TTACTCCAAT CTATGATGAT CTCTGGGGAT AAAGTCATTG CTATTAGGTT ACGCTCATGG ACGAAACCAC
CAGTTGTTTT TAGAGAAACC ATAGTTTTGA GAGTATTATA CACAGTTATG AATAACGACA TAAGATAACT CTTGTTACTT
ATTCGAGGTG TGTATTAGTC AGGC

>Vigan.06G142000.01
ATGGTGAGAA CCCCATCTTG TGACAAAAGT GGACTGAGAA AGGGTACTTG GACTCCTGAG GAAGATAGAA AATTAATTGC
TTATGTTACT AGATATGGTT CCTGGAATTG GCGCCAACTT CCCAGGTTTG CAGGTCTGGC AAGATGTGGG AAAAGTTGTA
GATTGAGATG GATGAATTAT CTGAGGCCTA ACGTCAAAAG AGGGAACTTC ACTCCACAGG AAGAAGATTG CATCATAAGA
ATGCACAAAA AACTTGGTAA CAGGTGGTCG GCTATTGCGG CTGAGTTACC AGGAAGAACA GATAACGAAA TAAAAAACCA
TTGGCACACT ACTCTGAAGA AAAGGTCTGA ACAAAATACA GTAACAAATG AAGAAGCTAG AGCCTTCAAA TCAAAGAATA
AAGAATCCAA CCCAAATGGT TTTACTGTTA CTCTTCCATC CAATTCCGGG ACTTCTGATA ATGCATCAGC CTCGGTCTCA
CCACTCTCAT CCTCCAGCAG CGTGTTTTCC TCCACAGCTT CAGATGATTG CAGTGCTGCC AGCATGAAAA GTTTGGTTTT
TGAAGATGAT GACTTTGGTT TTCTGGATTC ATACATGGAG CCGATGAACG AAAGTTTCTG GAGCGAGCTA AATCTGGATG
ACATCTCCTA CAGTGCAGCA TGTGAAATAC TGTCAGGAGA TACCAGTGGC GCAATTCAAA GCACTGATAC TAACGTTCAT
GATTGTTGTG CAATGTCTCC GCATGGATCA AGCAGCGAAA GCATTGTTGT CGATAATGGC TCTGGCAGTT TTCTCGATGC
ATATGCAGAG GCAACAGTTG AGAACTTTTG GATGCAGCCA TATGTGGCTG ACATGTCCCA CGTTCCAAGC GAACTTCTTG
TCCCTTCCGT TGTAGAATCT GAATATTTTA CTCCAATCTA TGATGATCTC TGGGGATAA

>Vigan.06G142000.01
MVRTPSCDKS GLRKGTWTPE EDRKLIAYVT RYGSWNWRQL PRFAGLARCG KSCRLRWMNY LRPNVKRGNF TPQEEDCIIR
MHKKLGNRWS AIAAELPGRT DNEIKNHWHT TLKKRSEQNT VTNEEARAFK SKNKESNPNG FTVTLPSNSG TSDNASASVS
PLSSSSSVFS STASDDCSAA SMKSLVFEDD DFGFLDSYME PMNESFWSEL NLDDISYSAA CEILSGDTSG AIQSTDTNVH
DCCAMSPHGS SSESIVVDNG SGSFLDAYAE ATVENFWMQP YVADMSHVPS ELLVPSVVES EYFTPIYDDL WG*