GBrowse Details

Vigan.06G153100.01

Basic Information:
Name: Vigan.06G153100.01
Multiple alignment
Variant Information
Position: Chr06:28458714..28463665 (+ strand)
Length: 4952
Functional Information:
Description: Similar to Uncharacterized protein. [I1LRP3, Glycine max]
GO: Biological Process: intracellular protein transport (GO:0006886)
Cellular Component: endoplasmic reticulum (GO:0005783)
Cellular Component: integral to membrane (GO:0016021)
InterPro: B-cell receptor-associated 31-like (IPR008417)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:6.00,8.72,12.97,8.07,15.80,16.26,18.87,10.26
Automatic updates:
Name: NM_001252725 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100798727 (LOC100798727), mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001317695 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max B-cell receptor-associated protein 31-like protein (LOC100820199), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr06:28458714..28458883 (+ strand)
Length: 170
Type: five_prime_UTR
Position: Chr06:28458884..28459166 (+ strand)
Length: 283
Type: CDS
Position: Chr06:28463025..28463389 (+ strand)
Length: 365
Type: CDS
Position: Chr06:28463390..28463665 (+ strand)
Length: 276
Type: three_prime_UTR


>Vigan.06G153100.01
GAAAAATGAA GTTTTGAATA CAGAAAATTC CAAACACATG CATGATGACG CCTCATTGGA CCAACACATT TCCTCGTTGA
ATCCACCCCT TTTTCTCCTC TTCGTCTCTC TCAACACCGC TTTCTTCTGT TCCTAATTCT AGTCTCTTCT TCCAAAGTGA
TTCAAAGAAG ATGTTGCAAT TACTCTACAC TGCGATTTTC AGCGAAATGC TTCTGATTCT CACCCTAGTT TTTAAGACCC
CTCTCAGAAA ACTGGTCATC ATTTCCCTCG ATCGGGTCAA ACGCGGCCGT GGCCCCATCG TTGTGTCCAC CGTGGGCGCC
ACATTGGTGG TGGTTCTCTC TTCCAGCCTC TACAGCATGG CCAAGATCCA GCAACGCATC CTCGAGGCCG GTATACTCAA
CCCCACCGAC CAAGTTCTTA TGTCCAACCA CATGCTCGAA GCCTCTCTCA TGGGGTTTTT GTTGTTCCTC TCTCTGATGA
TTGATAGATT GCATCACTAC ATAAGAGAGC TTCGTTTACT CAGAAAGGCC ATGGAAGCTA TTAAGAAACA AAGCCGAAGT
TTTGAAGATG ACAAAAATGG TAATACAGAG GAACTGAAAG CATTGACAGA AGAAATTGCC ACATTGAAGT CCAAAATTAA
GAAACTGGAA TCTGAATGTG AGACAAAAGG ACATGAGGCT AAGTCTTTGG AAACTGAAGT AGAAGCTCAT AAAAAGCAGT
CGGAGGGTTT CCTTATGGAG TATGATCGCC TGTTGGAAGA CAATCAGAGT CTTCGGAGTC AGTTACAGGC CCTTGAGAGC
TCTTTGCAAT CCTCATAATA AAAAGAATAT GTGATTTCGT TGAAATATCT AAAATAAAAC TCTATCATTT GTTTAACTAC
TGTTTGATGC CTCATACTTT CTTAATGAGG TCACATATGT ATATAAGTAT TTGAAACAGA TTAACCCTGG ATTGAGTGAA
CTTGTTGCGT TTTAAGCAGC TCACATTATA TATGAGTTTA TTAGCCTATT ATTCTTCATA AGATCATCAT AAAGGAACAA
ATATTCTTGT CAAAGTTGGG TTTTGAGTTG TTATATTCAT AACTTGGAAA ATCA

>Vigan.06G153100.01
ATGTTGCAAT TACTCTACAC TGCGATTTTC AGCGAAATGC TTCTGATTCT CACCCTAGTT TTTAAGACCC CTCTCAGAAA
ACTGGTCATC ATTTCCCTCG ATCGGGTCAA ACGCGGCCGT GGCCCCATCG TTGTGTCCAC CGTGGGCGCC ACATTGGTGG
TGGTTCTCTC TTCCAGCCTC TACAGCATGG CCAAGATCCA GCAACGCATC CTCGAGGCCG GTATACTCAA CCCCACCGAC
CAAGTTCTTA TGTCCAACCA CATGCTCGAA GCCTCTCTCA TGGGGTTTTT GTTGTTCCTC TCTCTGATGA TTGATAGATT
GCATCACTAC ATAAGAGAGC TTCGTTTACT CAGAAAGGCC ATGGAAGCTA TTAAGAAACA AAGCCGAAGT TTTGAAGATG
ACAAAAATGG TAATACAGAG GAACTGAAAG CATTGACAGA AGAAATTGCC ACATTGAAGT CCAAAATTAA GAAACTGGAA
TCTGAATGTG AGACAAAAGG ACATGAGGCT AAGTCTTTGG AAACTGAAGT AGAAGCTCAT AAAAAGCAGT CGGAGGGTTT
CCTTATGGAG TATGATCGCC TGTTGGAAGA CAATCAGAGT CTTCGGAGTC AGTTACAGGC CCTTGAGAGC TCTTTGCAAT
CCTCATAA

>Vigan.06G153100.01
MLQLLYTAIF SEMLLILTLV FKTPLRKLVI ISLDRVKRGR GPIVVSTVGA TLVVVLSSSL YSMAKIQQRI LEAGILNPTD
QVLMSNHMLE ASLMGFLLFL SLMIDRLHHY IRELRLLRKA MEAIKKQSRS FEDDKNGNTE ELKALTEEIA TLKSKIKKLE
SECETKGHEA KSLETEVEAH KKQSEGFLME YDRLLEDNQS LRSQLQALES SLQSS*