GBrowse Details

Vigan.06G154500.01

Basic Information:
Name: Vigan.06G154500.01
Multiple alignment
Variant Information
Position: Chr06:28639350..28641778 (+ strand)
Length: 2429
Functional Information:
Description: Similar to uncharacterized LOC101202853. [XP_004170381.1, Cucumis sativus]
InterPro: Protein of unknown function DUF1068 (IPR010471)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:30.04,27.45,46.61,27.27,42.98,82.86,27.96,48.51
Automatic updates:
Name: NM_001248775 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100527412 (LOC100527412), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr06:28639350..28639569 (+ strand)
Length: 220
Type: five_prime_UTR
Position: Chr06:28639570..28639771 (+ strand)
Length: 202
Type: CDS
Position: Chr06:28640689..28640712 (+ strand)
Length: 24
Type: CDS
Position: Chr06:28641355..28641701 (+ strand)
Length: 347
Type: CDS
Position: Chr06:28641702..28641778 (+ strand)
Length: 77
Type: three_prime_UTR


>Vigan.06G154500.01
AAATCTGCGA AGAAAGAATG AAAGAAAAAA AAACATTAAA AATGGAGAAA GAAAAGGGAA GACAGAAGAG GAAGCAGTGT
GAACAATTTC TCAAAGTTTC CACTTTCGAC ATTGCCGACG GCCCCAAAAG ACACCATCAT TCGCTCCTTT TCTCTCACTA
GATTTCTTAT ATTTCTGTCT TCATTTGTGT TTGTGTGTGC CAAAGCACAG AGAGAGAAAG ATGGCTATGA ACCAATCAAA
GGCTGTGTTG CTGAGAGTGA GTTTGGTGGT GGTGGCTCTC TGCATAGCAG GATACATAGT GGGTCCCCCT CTCTACTGGC
ATTTCGTTGA AGGTTTGGCT GCAGTCAGCC ACTCTTCTCC TTCTGCTTGT GCCCCCTGCG TCTGTGATTG CTCTTCTCAA
CCTATTCTTT CCATTCCTCA AGGCCTGAGC AACACTTCCT TTGGAGATTG TGCAAAGTCT GATCCAGAAG TGAGTGGAGA
CACTGAGAAA AACTTTGCAG AGCTATTGAC AGAGGAACTG AAGCTGCGGG AGAACCAAGC CATGGAAAAT CAGCAACATG
CTGACATGGC ACTGCTTGAG GCAAAGAAGT TTGCATCACA GTATCAGAAG GAAGCTGACA AGTGCAATTC AGGGATGGAA
ACTTGCGAAG AGGCTAGGGA GAAGTCTGAG TTGGCATTAG TGGAGCAGAA GAAGCTAACT GCATTGTGGG AACTTAGAGC
ACGTCAGAAA GGTTGGAAAG AAGGGCTTGC CAAATCTCAT GCACGCTCTC AAGGAAAAGT GCAGAGTTCT TAGATACAGT
ACATGCTTTC ATAATAGTTT TCAATACTGA TAATAGAAAA AGCAAGTAAT CCTGTCTCTC ACTTGTGTTT 

>Vigan.06G154500.01
ATGGCTATGA ACCAATCAAA GGCTGTGTTG CTGAGAGTGA GTTTGGTGGT GGTGGCTCTC TGCATAGCAG GATACATAGT
GGGTCCCCCT CTCTACTGGC ATTTCGTTGA AGGTTTGGCT GCAGTCAGCC ACTCTTCTCC TTCTGCTTGT GCCCCCTGCG
TCTGTGATTG CTCTTCTCAA CCTATTCTTT CCATTCCTCA AGGCCTGAGC AACACTTCCT TTGGAGATTG TGCAAAGTCT
GATCCAGAAG TGAGTGGAGA CACTGAGAAA AACTTTGCAG AGCTATTGAC AGAGGAACTG AAGCTGCGGG AGAACCAAGC
CATGGAAAAT CAGCAACATG CTGACATGGC ACTGCTTGAG GCAAAGAAGT TTGCATCACA GTATCAGAAG GAAGCTGACA
AGTGCAATTC AGGGATGGAA ACTTGCGAAG AGGCTAGGGA GAAGTCTGAG TTGGCATTAG TGGAGCAGAA GAAGCTAACT
GCATTGTGGG AACTTAGAGC ACGTCAGAAA GGTTGGAAAG AAGGGCTTGC CAAATCTCAT GCACGCTCTC AAGGAAAAGT
GCAGAGTTCT TAG

>Vigan.06G154500.01
MAMNQSKAVL LRVSLVVVAL CIAGYIVGPP LYWHFVEGLA AVSHSSPSAC APCVCDCSSQ PILSIPQGLS NTSFGDCAKS
DPEVSGDTEK NFAELLTEEL KLRENQAMEN QQHADMALLE AKKFASQYQK EADKCNSGME TCEEAREKSE LALVEQKKLT
ALWELRARQK GWKEGLAKSH ARSQGKVQSS *