GBrowse Details

Vigan.06G156000.01

Basic Information:
Name: Vigan.06G156000.01
Multiple alignment
Variant Information
Position: Chr06:28799118..28802403 (- strand)
Length: 3286
Functional Information:
Description: Similar to Seed maturation protein PM37. [V5NAS1, Phaseolus vulgaris]
GO: Biological Process: protein folding (GO:0006457)
Biological Process: response to heat (GO:0009408)
Molecular Function: ATP binding (GO:0005524)
Molecular Function: heat shock protein binding (GO:0031072)
Molecular Function: unfolded protein binding (GO:0051082)
InterPro: Heat shock protein DnaJ, cysteine-rich domain (IPR001305)
DnaJ domain (IPR001623)
Chaperone DnaJ, C-terminal (IPR002939)
HSP40/DnaJ peptide-binding (IPR008971)
Chaperone DnaJ (IPR012724)
DnaJ domain, conserved site (IPR018253)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:1103.22,1004.06,448.89,303.39,435.70,262.54,189.86,126.33
Arabidopsis thaliana homolog: AT3G44110.1, AT5G22060.1
Automatic updates:
Name: OP991878 NCBI(nuccore)
Organism: Vigna aconitifolia
Description: Vigna aconitifolia DnaJ type-I protein (VaDJI) mRNA, complete cds.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr06:28799118..28799726 (- strand)
Length: 609
Type: three_prime_UTR
Position: Chr06:28799727..28800049 (- strand)
Length: 323
Type: CDS
Position: Chr06:28800131..28800329 (- strand)
Length: 199
Type: CDS
Position: Chr06:28800426..28800702 (- strand)
Length: 277
Type: CDS
Position: Chr06:28801318..28801456 (- strand)
Length: 139
Type: CDS
Position: Chr06:28801557..28801725 (- strand)
Length: 169
Type: CDS
Position: Chr06:28801914..28802063 (- strand)
Length: 150
Type: CDS
Position: Chr06:28802064..28802403 (- strand)
Length: 340
Type: five_prime_UTR


>Vigan.06G156000.01
ATCTAGAACA AAATTCCCAT TCAAACACAT TCATATCCAA TGGTTCACAT CTTCAACTTC ACCTAAACAA GCAAACAAAA
AATTCTAGAC TCTTCTACTC TGGGACCCAT GCCACAATCA CCCCTATCGC AGCCGTTCAT TGATCACTCT TCACTCAATC
TCCACCACAA AAAATAGAGA CAAAATAAAG AAGAATTTGA ATATAAGTAT AAATATTCAA CTCTGGAGTT TTCATATCTA
GGGTGTTTCT TTTTCTCTCG TTTGTTCCGA TCTAACTTTC CCTTCTCGTT GTTCTTCGCA TCCTCAAACT AGGGTTTCCA
TTTCGATCCA TTAGAGCACT ATGTTTGGGA GGGCACCAAA GAAGAGCGAT AACACACGGT ACTACGAAAT CCTCGGCGTC
TCCAAAAACG CCTCACAGGA TGATTTGAAG AAGGCTTACA AGAAAGCTGC CATCAAGAAT CACCCCGACA AGGGCGGTGA
TCCCGAGAAG TTTAAAGAGT TGGCTCAAGC TTATGAGGTT CTGAGTGATC CTGAGAAGCG TGAGATATAT GATCAGTATG
GTGAAGATGC GCTCAAGGAA GGAATGGGTG GTGGCGGTGG CCATGATCCA TTTGATATCT TTTCATCTTT CTTTGGCGGT
GGAAGTCCTT TTGGATCAGG TGGTAGTAGT CGAGGTAGGA GACAGAGGCG CGGAGAAGAT GTGGTTCACC CTCTCAAGGT
CTCTCTGGAG GACCTTTACC TAGGGACTTC AAAGAAGCTG TCCCTCTCCA GAAATGTCAT ATGCTCCAAG TGCAGTGGCA
AGGGTTCTAA GTCTGGGGCT TCGATGAAGT GTGCTGGTTG TCAAGGAACT GGTATGAAGG TTTCTATAAG ACACCTTGGT
CCATCCATGA TTCAACAAAT GCAGCATGCT TGCAATGAAT GTAAGGGTAC TGGAGAAACT ATCAATGATA GAGATCGCTG
CCCACAATGC AAGGGAGAGA AGGTTGTGCA GGAGAAGAAA GTTCTTGAAG TAATTGTGGA AAAGGGAATG CAGAATGGGC
AGAAGATTAC ATTCCCTGGT GAAGCTGATG AAGCGCCGGA CACAATTACT GGGGATATTG TCTTTGTTCT TCAGCAGAAG
GAGCATCCTA AATTCAGAAG AAAGGCTGAA GATCTTTTTG TTGAACACAC CTTGTCCCTT ACAGAGGCTT TGTGTGGTTT
CCAATTTGTC CTGACCCACC TGGATGGCCG TCAGCTTCTT ATTAAATCAA ATCCTGGGGA AATTGTGAAA CCTGATTCAT
ACAAGGCTAT TAATGACGAG GGGATGCCCA TGTACCAGAG GCCATTCATG AAGGGGAAGC TTTATCTTCA CTTCACTGTG
GAATTCCCTG ATTTTCTAAA TCCTGATCAG GTTAAGGCTT TGGAAGTCGT TCTGCCCCCA AAGCAGCCTT CTCAGTTAAC
AGACATGGAG CTGGACGAAT GTGAGGAGAC CACACTTCAT GATGTCAATA TGGATGAGGA GTCTAGGAGG AGGCAGCAAC
AAGCTGCTCA GGAAGCATAT GAGGAGGATG ATGATATGCC TGGTGGTGCA CAGAGGGTAC AGTGCGCCCA ACAGTAATAA
CTTGTGCGGA AGGAATGTAG AATCTGAATT GATGAAAAAT GAATGACGAC GATGATGATA CTGTTTTGAT GTTCCGTAAC
TGTAGCGTGG ATTATAGACT AAAAAATGAC TAGTATTTTA GTAATTGATT GTGAGAAAGT GAAGCAGTAA TATGTGGAAA
GGATAATTTT CGTTTTGCGT CCTAAATACT TCGCTTATTT TAAGTATTTC TGTTACGGTT ATTCAATTTT ATTACCATTT
CTTGAATGTG ATTGCTTGCT AAAGAGTGCA TTTAGGAAAT TTGGCGTGGA ATGGGGATAA CCTTATTATT CTCACACAGA
ACGAAGTATC TCTGTCTGAA AGTTTTTGTC AGGATTAGGA AGAGGTTTTC AATTGTATGT TTTTTGGTTT TTAAAGTATG
AAGTTGGATG AGCAGTTGAA GTGGTTGAAA TATGGTGGGT TGTTGTACCA TAGGTCTTCT CCAGCAGGTT TATTGGAGTT
CCAACATCAT TTGCAGGGAG ATGCTGATAA ATAAATAACT TTTTGTTCAT TTCCTAGATT GTGCTTGAAT TGAATGTGTT
CATTAATTAA TGGATTCATA ACAGTTTAAT CGATTTTTTT TATTAA

>Vigan.06G156000.01
ATGTTTGGGA GGGCACCAAA GAAGAGCGAT AACACACGGT ACTACGAAAT CCTCGGCGTC TCCAAAAACG CCTCACAGGA
TGATTTGAAG AAGGCTTACA AGAAAGCTGC CATCAAGAAT CACCCCGACA AGGGCGGTGA TCCCGAGAAG TTTAAAGAGT
TGGCTCAAGC TTATGAGGTT CTGAGTGATC CTGAGAAGCG TGAGATATAT GATCAGTATG GTGAAGATGC GCTCAAGGAA
GGAATGGGTG GTGGCGGTGG CCATGATCCA TTTGATATCT TTTCATCTTT CTTTGGCGGT GGAAGTCCTT TTGGATCAGG
TGGTAGTAGT CGAGGTAGGA GACAGAGGCG CGGAGAAGAT GTGGTTCACC CTCTCAAGGT CTCTCTGGAG GACCTTTACC
TAGGGACTTC AAAGAAGCTG TCCCTCTCCA GAAATGTCAT ATGCTCCAAG TGCAGTGGCA AGGGTTCTAA GTCTGGGGCT
TCGATGAAGT GTGCTGGTTG TCAAGGAACT GGTATGAAGG TTTCTATAAG ACACCTTGGT CCATCCATGA TTCAACAAAT
GCAGCATGCT TGCAATGAAT GTAAGGGTAC TGGAGAAACT ATCAATGATA GAGATCGCTG CCCACAATGC AAGGGAGAGA
AGGTTGTGCA GGAGAAGAAA GTTCTTGAAG TAATTGTGGA AAAGGGAATG CAGAATGGGC AGAAGATTAC ATTCCCTGGT
GAAGCTGATG AAGCGCCGGA CACAATTACT GGGGATATTG TCTTTGTTCT TCAGCAGAAG GAGCATCCTA AATTCAGAAG
AAAGGCTGAA GATCTTTTTG TTGAACACAC CTTGTCCCTT ACAGAGGCTT TGTGTGGTTT CCAATTTGTC CTGACCCACC
TGGATGGCCG TCAGCTTCTT ATTAAATCAA ATCCTGGGGA AATTGTGAAA CCTGATTCAT ACAAGGCTAT TAATGACGAG
GGGATGCCCA TGTACCAGAG GCCATTCATG AAGGGGAAGC TTTATCTTCA CTTCACTGTG GAATTCCCTG ATTTTCTAAA
TCCTGATCAG GTTAAGGCTT TGGAAGTCGT TCTGCCCCCA AAGCAGCCTT CTCAGTTAAC AGACATGGAG CTGGACGAAT
GTGAGGAGAC CACACTTCAT GATGTCAATA TGGATGAGGA GTCTAGGAGG AGGCAGCAAC AAGCTGCTCA GGAAGCATAT
GAGGAGGATG ATGATATGCC TGGTGGTGCA CAGAGGGTAC AGTGCGCCCA ACAGTAA

>Vigan.06G156000.01
MFGRAPKKSD NTRYYEILGV SKNASQDDLK KAYKKAAIKN HPDKGGDPEK FKELAQAYEV LSDPEKREIY DQYGEDALKE
GMGGGGGHDP FDIFSSFFGG GSPFGSGGSS RGRRQRRGED VVHPLKVSLE DLYLGTSKKL SLSRNVICSK CSGKGSKSGA
SMKCAGCQGT GMKVSIRHLG PSMIQQMQHA CNECKGTGET INDRDRCPQC KGEKVVQEKK VLEVIVEKGM QNGQKITFPG
EADEAPDTIT GDIVFVLQQK EHPKFRRKAE DLFVEHTLSL TEALCGFQFV LTHLDGRQLL IKSNPGEIVK PDSYKAINDE
GMPMYQRPFM KGKLYLHFTV EFPDFLNPDQ VKALEVVLPP KQPSQLTDME LDECEETTLH DVNMDEESRR RQQQAAQEAY
EEDDDMPGGA QRVQCAQQ*