GBrowse Details

Vigan.06G192800.01

Basic Information:
Name: Vigan.06G192800.01
Multiple alignment
Variant Information
Position: Chr06:32952089..32956156 (+ strand)
Length: 4068
Functional Information:
Description: Similar to mitogen-activated protein kinase homolog NTF6-like. [XP_004505940.1, Cicer arietinum]
GO: Biological Process: protein phosphorylation (GO:0006468)
Molecular Function: protein kinase activity (GO:0004672)
Molecular Function: protein serine/threonine kinase activity (GO:0004674)
Molecular Function: MAP kinase activity (GO:0004707)
Molecular Function: ATP binding (GO:0005524)
Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772)
InterPro: Protein kinase domain (IPR000719)
Serine/threonine- / dual specificity protein kinase, catalytic domain (IPR002290)
Mitogen-activated protein (MAP) kinase, conserved site (IPR003527)
Serine/threonine-protein kinase, active site (IPR008271)
Protein kinase-like domain (IPR011009)
Protein kinase, ATP binding site (IPR017441)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:2.08,2.69,3.90,1.38,5.53,2.60,6.99,5.38
Arabidopsis thaliana homolog: AT1G01560.2, AT1G07880.2, AT2G43790.1, AT2G46070.1, AT4G01370.1, AT4G11330.1
Automatic updates:
Name: KP329552 NCBI(nuccore)
Organism: Arachis hypogaea
Description: Arachis hypogaea mitogen-activated protein kinase 13 (MAPK13) mRNA, complete cds.
PubMed ID: -
Status: Known Variant
Name: NM_001253305 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max mitogen-activated protein kinase homolog NTF6-like (LOC100802929), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr06:32952089..32952378 (+ strand)
Length: 290
Type: five_prime_UTR
Position: Chr06:32952379..32952539 (+ strand)
Length: 161
Type: CDS
Position: Chr06:32952634..32952763 (+ strand)
Length: 130
Type: CDS
Position: Chr06:32952868..32953005 (+ strand)
Length: 138
Type: CDS
Position: Chr06:32954222..32954554 (+ strand)
Length: 333
Type: CDS
Position: Chr06:32954735..32954918 (+ strand)
Length: 184
Type: CDS
Position: Chr06:32955285..32955460 (+ strand)
Length: 176
Type: CDS
Position: Chr06:32955461..32956156 (+ strand)
Length: 696
Type: three_prime_UTR


>Vigan.06G192800.01
AGGAGCGGGA TTTCACTGAC ACGATTCAAT TTCGAAAGAT AATTTTGATG GACAGTGTTG TTTTGGGTTG TCCCCAACTA
ATCACAAACG GGAAGGTTTA CAACAAGAAC AACGAAGCAG ATTCGAACAT TTGAAATTAA ATTTGAAAAG TTCGAACGCC
AAAAAGCAAA AGCCATTGAA GTCACTGTGG CAAAGTGGAC CTAATAATAA TCACATTCTG AAATCCTGAA TCCCAATTCT
CACTCACTTT CCTTGTTCGC TTCGGTTTGT GTGCAGAGAA ACGAAAGGAA ATGGAAAATA ACGCCGAATC TGAGAAACCG
AAAGGGAAAG GGATTCCAGT TCACGGTGGC AAGTACGTGC GCTACAACAT CTTAGGCAAC GTTTTCGAAG TCTATGCGAA
GTACGCACCG CCTCTGCAAC CCGTTGGTAG AGGCGCATAC GGCATCGTTT GCTGCGCGAC GAATTCGGAG ACCGAAGAAG
GAGTTGCGAT TAAGAAGATT GGGAATGCGT TTGACAACAG GATCGACGCG AAGAGGACGC TCAGAGAAAT CAAGCTTCTC
TGCCACATGG AACATGATAA CATAATTAAA ATTAAGGACA TAATTCGGCC AGCGGAGAGG GAGAATTTCA ACGATGTGTA
TATTGTGTAT GAGTTGATGG ACACCGATCT GCATCAGATT ATACAGTCTA ATCAGGCTCT CACTGATGAG CACTGCCAGT
ACTTTTTATA TCAACTCTTG CGAGGATTGA AGTACATACA TTCTGCAAAT GTTTTGCACC GAGATTTAAA ACCAAGCAAT
TTACTTCTCA ACGCAAACTG TGATCTCAAA ATATGTGACT TTGGGCTGGC CAGAACAACC TCAGAGACGG ACTTTATGAC
AGAATATGTT GTCACTCGTT GGTACAGGGC CCCTGAATTG TTATTGAATT GTTCAGAATA TACTGCTGCT ATTGATATTT
GGTCGGTTGG TTGTATTTTA ATGGAGATAA TTAGAAGGGA GCCTTTATTT CCTGGTAAAG ATTATGTTCA GCAGTTGGCC
CTTATAACTG AGTTATTAGG TTCTCCAAAT GACTCGGATC TTGGGTTCCT CAGAAGTGAT AATGCAAAGA AATATGTTAA
GCAGCTTCCA CATATAGAGA AGAGGTCTTT TGCTGAGCGG TTTCCTGATA CGTCCACGTT AGCAATTGAT CTTGCTGAGA
AAATGTTGGT CTTTGATCCC TCCAAGCGAA TAACTGTCGA AGAAGCACTA AATCACCCAT ACATGGCAAG TCTTCATGAG
ATCAACGAGG AGCCCGTTTG CCCAACTCCT TTCATCTTTG ATTTCGAACA GACAACTCTT AACGAAGAAG ACATAAAGGA
GCTCATATGG AGAGAGTCTC TAAACTTCAG CCAGGACCAG ATGTTGGAAT AGCCTTGGGC ATTGGCAAAA TATTTTTTAT
ATGGAATTTC GTTATTCAGG TTTGGAGTTG GGTGGTAAAG GTTCTATTTC TATCAAACAT GTTATAAATT GCTTTAGTAG
GTTTGGAGCT GCAAGTGCAG CATGTGATTC TGTAATGGAA ATGGTGAGGG AGATAGGTTC TCCCGTTCCA GTTGCCTTGA
GAGGGAAACT TTCTTTTACC TTTTTTATTT CTTGGAGAGG ATTATGGTAC CCACAAAGCG TTGGTGCTTG CTATGCATAA
GAGGGGCATA TGCTTCCAAG GCCTAAGCCG TTGTCTTTTT GGCTTTGCAT TGTATAAATA TCCAAATATA GTAGTTACAC
AGAAGTTATT GAAGATAAGC CACAATATAG TGGTTTTTAC TTTTGGGTGG TTATAATAGA GGTTTTGTTT CGTTATTTGT
CTTTCACTTT TGAATTTTAG ACACACTTCT GATGCGTTTT CTGAACTTTG GATTCTGTTT TGGTGCTTGT AAACTATCTT
TTCCTTCAAA TTACAGAGTT ATGGCAATCA CAGCTTGCTA GTTCCACTTG CGGAATTTGG CAACACTAAA TTGTGAGATT
CACTTCAGAA GATAAAGTTG AGAGGGATAA TTGTTGTTTG GAAAACTTTG ATAATTTCAA TTAAGTTATT TTGCATACAA
GGAATTTTAT TATATTAATG ACTTCTTT

>Vigan.06G192800.01
ATGGAAAATA ACGCCGAATC TGAGAAACCG AAAGGGAAAG GGATTCCAGT TCACGGTGGC AAGTACGTGC GCTACAACAT
CTTAGGCAAC GTTTTCGAAG TCTATGCGAA GTACGCACCG CCTCTGCAAC CCGTTGGTAG AGGCGCATAC GGCATCGTTT
GCTGCGCGAC GAATTCGGAG ACCGAAGAAG GAGTTGCGAT TAAGAAGATT GGGAATGCGT TTGACAACAG GATCGACGCG
AAGAGGACGC TCAGAGAAAT CAAGCTTCTC TGCCACATGG AACATGATAA CATAATTAAA ATTAAGGACA TAATTCGGCC
AGCGGAGAGG GAGAATTTCA ACGATGTGTA TATTGTGTAT GAGTTGATGG ACACCGATCT GCATCAGATT ATACAGTCTA
ATCAGGCTCT CACTGATGAG CACTGCCAGT ACTTTTTATA TCAACTCTTG CGAGGATTGA AGTACATACA TTCTGCAAAT
GTTTTGCACC GAGATTTAAA ACCAAGCAAT TTACTTCTCA ACGCAAACTG TGATCTCAAA ATATGTGACT TTGGGCTGGC
CAGAACAACC TCAGAGACGG ACTTTATGAC AGAATATGTT GTCACTCGTT GGTACAGGGC CCCTGAATTG TTATTGAATT
GTTCAGAATA TACTGCTGCT ATTGATATTT GGTCGGTTGG TTGTATTTTA ATGGAGATAA TTAGAAGGGA GCCTTTATTT
CCTGGTAAAG ATTATGTTCA GCAGTTGGCC CTTATAACTG AGTTATTAGG TTCTCCAAAT GACTCGGATC TTGGGTTCCT
CAGAAGTGAT AATGCAAAGA AATATGTTAA GCAGCTTCCA CATATAGAGA AGAGGTCTTT TGCTGAGCGG TTTCCTGATA
CGTCCACGTT AGCAATTGAT CTTGCTGAGA AAATGTTGGT CTTTGATCCC TCCAAGCGAA TAACTGTCGA AGAAGCACTA
AATCACCCAT ACATGGCAAG TCTTCATGAG ATCAACGAGG AGCCCGTTTG CCCAACTCCT TTCATCTTTG ATTTCGAACA
GACAACTCTT AACGAAGAAG ACATAAAGGA GCTCATATGG AGAGAGTCTC TAAACTTCAG CCAGGACCAG ATGTTGGAAT
AG

>Vigan.06G192800.01
MENNAESEKP KGKGIPVHGG KYVRYNILGN VFEVYAKYAP PLQPVGRGAY GIVCCATNSE TEEGVAIKKI GNAFDNRIDA
KRTLREIKLL CHMEHDNIIK IKDIIRPAER ENFNDVYIVY ELMDTDLHQI IQSNQALTDE HCQYFLYQLL RGLKYIHSAN
VLHRDLKPSN LLLNANCDLK ICDFGLARTT SETDFMTEYV VTRWYRAPEL LLNCSEYTAA IDIWSVGCIL MEIIRREPLF
PGKDYVQQLA LITELLGSPN DSDLGFLRSD NAKKYVKQLP HIEKRSFAER FPDTSTLAID LAEKMLVFDP SKRITVEEAL
NHPYMASLHE INEEPVCPTP FIFDFEQTTL NEEDIKELIW RESLNFSQDQ MLE*