GBrowse Details

Vigan.06G200300.01

Basic Information:
Name: Vigan.06G200300.01
Multiple alignment
Variant Information
Position: Chr06:33653914..33655731 (+ strand)
Length: 1818
Functional Information:
Description: Similar to mitochondrial import inner membrane translocase subunit Tim9-like. [XP_004505864.1, Cicer arietinum]
InterPro: Tim10/DDP family zinc finger (IPR004217)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:9.56,14.72,24.04,13.60,59.93,70.16,43.39,19.19
Arabidopsis thaliana homolog: AT3G46560.1
Automatic updates:
Name: NM_001249644 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100526964 (LOC100526964), mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001249885 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100500613 (LOC100500613), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr06:33653914..33654106 (+ strand)
Length: 193
Type: five_prime_UTR
Position: Chr06:33654107..33654201 (+ strand)
Length: 95
Type: CDS
Position: Chr06:33655065..33655251 (+ strand)
Length: 187
Type: CDS
Position: Chr06:33655252..33655731 (+ strand)
Length: 480
Type: three_prime_UTR


>Vigan.06G200300.01
AAATATACGT GGAACGATGC GTTTTAGTTA AAAGCTGAAA CCCTGAATAA TTTTAGGTTA AGTGGAAACT GGTGGTGTGA
CCTATATATA CCTTCTTCTT TTTTCTCTAC AGCGTTAGGG TTTTGTCTCG ATCGCAGTTT CTTCCGTACT TTCTAGCAAA
ACCCTTCGAC GGTTACTGAT CGGTGGATCA AGTATGGACA AAAGCATGTT AGCGGATCTG GAATCGCTTC CTGAGGCAGA
TAGGCAAAGA ATGTCTGCCA TGATGGAACA GCTCCAAATC CGTGATAGTC TGAGAATGTA TAATTCACTT GTTGAGAGAT
GCTTTACTGA TTGTGTTGAC ACATTTAAGC ATAAATCCCT GCAAAAGCAA GAGGAATCCT GTGTTCGAAG ATGTGCAGAG
AAATTTCTGA AGCATTCTAT GCGGGTTGGC ATGAGGTTTG CCGAGCTCAA CCAAGGAGCT GCAACTCAAG ATTGATGTCT
GTCAACTTCT TTAAATGGAT AACTGTTTAT CATTATTTTG AATGCACTTT ACTTACATTT TTGGTCTTGA GAAATGAGAT
ACTGTAGAGA ACACTAATTT GCTATTAGTA CGCAACAATC CTTGTTAAAT AAATTTGTGG TGATACAATC ACAGTGCTTT
GGAATCCTGA CACTTGTTTA AATGAGGTTT TTAGTTACCT AACTAGTTTT TATCCATTGT GAAGATCATT ACTATTAAGG
ACTTTCCTTC TCCCAGTCCC TAAGGTCCAT TTCACGCATA CCTGGTTCAT TACTATGCAG AAAGCCTATG CCACTAACTG
CATGGGATTA GGTGCATTCA GTAGTATTTA ACATTATGTA AATATGCCTC CGTTGATCTC CGATTTATAT GTAATTTGTT
AGCAAATAAC GATTTCACTT TTTATTGACA TGTTTTTTAA GATGAGATTA TGGTTTTGGT TTTATTGTTA TAAAC

>Vigan.06G200300.01
ATGGACAAAA GCATGTTAGC GGATCTGGAA TCGCTTCCTG AGGCAGATAG GCAAAGAATG TCTGCCATGA TGGAACAGCT
CCAAATCCGT GATAGTCTGA GAATGTATAA TTCACTTGTT GAGAGATGCT TTACTGATTG TGTTGACACA TTTAAGCATA
AATCCCTGCA AAAGCAAGAG GAATCCTGTG TTCGAAGATG TGCAGAGAAA TTTCTGAAGC ATTCTATGCG GGTTGGCATG
AGGTTTGCCG AGCTCAACCA AGGAGCTGCA ACTCAAGATT GA

>Vigan.06G200300.01
MDKSMLADLE SLPEADRQRM SAMMEQLQIR DSLRMYNSLV ERCFTDCVDT FKHKSLQKQE ESCVRRCAEK FLKHSMRVGM
RFAELNQGAA TQD*