GBrowse Details

Vigan.06G204200.01

Basic Information:
Name: Vigan.06G204200.01
Multiple alignment
Variant Information
Position: Chr06:33944670..33946520 (- strand)
Length: 1851
Functional Information:
Description: Similar to Uncharacterized protein. [V4SCF6, Citrus clementina.]
GO: Biological Process: response to stress (GO:0006950)
InterPro: Universal stress protein A (IPR006015)
UspA (IPR006016)
Rossmann-like alpha/beta/alpha sandwich fold (IPR014729)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:199.33,103.11,147.11,104.61,108.71,275.98,226.71,160.68
Automatic updates:
Name: NM_001248261 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100499728 (LOC100499728), mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001249086 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100306505 (LOC100306505), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr06:33944670..33945083 (- strand)
Length: 414
Type: three_prime_UTR
Position: Chr06:33945084..33945174 (- strand)
Length: 91
Type: CDS
Position: Chr06:33945734..33945852 (- strand)
Length: 119
Type: CDS
Position: Chr06:33946009..33946118 (- strand)
Length: 110
Type: CDS
Position: Chr06:33946221..33946395 (- strand)
Length: 175
Type: CDS
Position: Chr06:33946396..33946520 (- strand)
Length: 125
Type: five_prime_UTR


>Vigan.06G204200.01
GACAAAAGAT AAACGTTTTC ATAAATTGGA CAGTTCCTCC CAACTGTGAA GCTCCAACAA ACATTTCGGA AGCTCAAAGG
TAAACAGTGA ATTAACAATA AAAAACACCA GAATTTGTTG AAACGATGAG CAGTGAAAGG AGAATTGGGG TGGCTTTGGA
TTTCTCTAAG GGAAGTAAGA TCGCTCTCAA ATGGGCTATT GATAATCTTC TCCGCAACGG CGACACACTA TTCATCATCC
ACATCAAGCA CGGCCAAGGC AGTGAATCCC GAAATCTTCT ATGGTCCACC ACTGGATCAC CACTGATTCC GTTGTCGGAG
TTTCGTGATA AGGATGTGAT GCATCATTAT GAGGTGGATT CTGATGCCGA GGTGTTGGAC CTGCTTGACA CCGCTTCTAA
GCAGAAACAG GTGGCTGTGG TTGCAAAGCT GTACTGGGGC GATGCAAGGG AGAAAATTTG TGAAGCTGTT GGGGATTTGA
AGCTTCACTC TTTGGTCATG GGTAGCAGAG GCTTAGGTGC CATACAGAGG GTGTTGCTGG GGAGTGTGAC CAACTATGTC
ACCATAAATG CAAGTTGCCC TATAACGATT GTGAAAGACT CTGCCCCTTC CACTATCTGA TATGCTACTG AATTTGATTG
GTCTTGCAAT CGGTTGTTCC ATCTTCATCA GTGACCAGAC TGTGTTTTCC TCCTTCGTCT TACACGTGTA GTTGGGATTT
TGAACACACT TGAAGTTAAG GATTCGCCAA GCAAAATGTC TAGTGTTAGC ACTCTCTTTT AAGTGCTTAG TTATGACCAA
AATTGTGCTT ATAAATAAGC TTTGTGTTGG ATCTGTACTG AACTTACAAG TGCAAATGAT GATGTGGTGG TGTTAAATGT
TTGATATTCT ATTTGATTCT TGCTGTCTTT GCTGCATCAC AATGATGTGT TAGTGGTTTT TAATATGGTA GCTTTCTTTA
ACTGCATATT CACCCCTACT TTTGTCAATC AACTTGAACA CAGTTATTCA TTCTGTTTTT ACCTAAGAAT TCAA

>Vigan.06G204200.01
ATGAGCAGTG AAAGGAGAAT TGGGGTGGCT TTGGATTTCT CTAAGGGAAG TAAGATCGCT CTCAAATGGG CTATTGATAA
TCTTCTCCGC AACGGCGACA CACTATTCAT CATCCACATC AAGCACGGCC AAGGCAGTGA ATCCCGAAAT CTTCTATGGT
CCACCACTGG ATCACCACTG ATTCCGTTGT CGGAGTTTCG TGATAAGGAT GTGATGCATC ATTATGAGGT GGATTCTGAT
GCCGAGGTGT TGGACCTGCT TGACACCGCT TCTAAGCAGA AACAGGTGGC TGTGGTTGCA AAGCTGTACT GGGGCGATGC
AAGGGAGAAA ATTTGTGAAG CTGTTGGGGA TTTGAAGCTT CACTCTTTGG TCATGGGTAG CAGAGGCTTA GGTGCCATAC
AGAGGGTGTT GCTGGGGAGT GTGACCAACT ATGTCACCAT AAATGCAAGT TGCCCTATAA CGATTGTGAA AGACTCTGCC
CCTTCCACTA TCTGA

>Vigan.06G204200.01
MSSERRIGVA LDFSKGSKIA LKWAIDNLLR NGDTLFIIHI KHGQGSESRN LLWSTTGSPL IPLSEFRDKD VMHHYEVDSD
AEVLDLLDTA SKQKQVAVVA KLYWGDAREK ICEAVGDLKL HSLVMGSRGL GAIQRVLLGS VTNYVTINAS CPITIVKDSA
PSTI*