GBrowse Details

Vigan.06G241700.01

Basic Information:
Name: Vigan.06G241700.01
Multiple alignment
Variant Information
Position: Chr06:36750268..36755815 (+ strand)
Length: 5548
Functional Information:
Description: Similar to Catalytic, putative. [B9SCQ5, Ricinus communis]
GO: Molecular Function: catalytic activity (GO:0003824)
Molecular Function: phosphoric diester hydrolase activity (GO:0008081)
Molecular Function: metal ion binding (GO:0046872)
InterPro: HD/PDEase domain (IPR003607)
HD domain (IPR006674)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.18,3.23,5.84,5.49,4.28,5.36,7.95,5.13
Arabidopsis thaliana homolog: AT1G17330.1
Automatic updates:
Name: NM_001248727 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100500273 (LOC100500273), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr06:36750268..36750350 (+ strand)
Length: 83
Type: five_prime_UTR
Position: Chr06:36750351..36750509 (+ strand)
Length: 159
Type: CDS
Position: Chr06:36750605..36750654 (+ strand)
Length: 50
Type: CDS
Position: Chr06:36750897..36750994 (+ strand)
Length: 98
Type: CDS
Position: Chr06:36751581..36751679 (+ strand)
Length: 99
Type: CDS
Position: Chr06:36752007..36752179 (+ strand)
Length: 173
Type: CDS
Position: Chr06:36752341..36752427 (+ strand)
Length: 87
Type: CDS
Position: Chr06:36752428..36755815 (+ strand)
Length: 3388
Type: three_prime_UTR


>Vigan.06G241700.01
GAAAGTCAAA AAGTAAGTGT GAAGTTAAAC TAAATTAGTT TTGGATAAGA TGCCCTAACC ATGGGTTGAA GGGTGATGCA
GAGATGGAGA ATGTAAGAAG AAATGCAGAA GCTCTTGTGG AGAAGATGAT GAAAGGGAAT GATGCTTCCC ATGACGCAGC
TCATGTTTGG AGAGTTCGTG ATCTTGCTCT ATCACTTGCC GAAGAGGAAG GCCTATCTTC CGATCCTCAC TCCATGCAAA
TCGTTGAGCT TGCTGCACTG CTCCACGACA TAGCTGACTA CAAATACCTT AGGGACCCAT CTGAGGAAAA AATTGTTGAG
AATTTTCTTG ACCAAGAGGG AGTTGAGGAG GACAAGAAAT TAACAATTTT GAGGATCATC AGAGAAATGG GTTTCAAGGA
AGAGGTGACT GGAAATGGAA GTAGTGATTG GTTTCCAGAA TTTGGAGTTG TGCAAGATGC TGATCGACTT GATGCTATTG
GTGCTATAGG AATTGCACGT TGCTTCACTT TTGGCGGGAG TAAGAAGAGG TTGCTGCATG ATCCCTCCAT TCTGCCACGT
TCCGATTTGT CCAAGGAGCA ATACATGAAC AAAGAGGAAC AGACTACTAT TAATCATTTT CATGAGAAGC TTCTCAAGCT
CAAAGATATG ATGAAAACCA AGGCTGGGAA AAGGAGGGCT GAAAGAAGGC ATAAGTTCAT GGAGGAGTTT GTGAAAGAGT
TCTACGATGA ATGGAATGGC TTAAACTGAT AAACATTTTT CATCTCTTCT TTCCTTGGAC TATAGGGTCA GAGCTTCTTA
AAAAATGAAA CTCTGGGAAA TGTTCAAATG TTGTTATTAA CAATCCATGA CATAATCGTT TCCTCTCTCA GCATGTCGGG
ATCCCCATGT CTTAGATTGT CTTGGATGTT AGACTATATA GTGAGCTTGG TTGTTGGTTA CAAACATTGC GATGGATTTC
AAGTATGTTT AGAAAGATAG AACTTGTTTA TTGTGGAGCC CAGCATAAGG TGTTTGATCC TAGAACAAGA ATAAGTCTCT
TATAAGAAGT AAGGATTAAG AATAGAGATA AGAGAATAAA ATTTATGAAC TATTAATCCT CTTTGGGCGT AATCCAAAAA
TCCAACTGAT CTTGATGAGG AAAATCAATT GGTTAAAGAA AAAAAATTGC GGTTCCTGTT TATAGGATAT ATATTGCTGA
ATATTAGACA GATGATTAAC GTGGTTAAAT TTTTTTGGAT AAGTTCTTAT GAATCATGGA ATAAAAAATG ACAGGGAGTT
GGGAAGCATT TATTCATTAA AGATAACAAA CCATACAGGC AAATGTTTGT AAAAGTACTG TCTATCTAAT TCACACGGAC
CAGAAATATA TTCATTAGGA AATGCAGTTC TGGAATATCC CATCAACAGA ACATGAACTC CATTATTTAG CGTTTTCCAG
CTCTATATCT ATCCAATCCA ATTCCTTTAT CATGTTTGTA CTTACAAGCT TTCCAAATAA GAAACAAACT GAAAACTATA
TTACTACTGC ATGATCAGCA TGAATTAGTT TATTTGAACC CTTCCTAAGT GTCTGTGAAT TTGTGCAACA TCCCTGCGGT
ATAGGTTAAC TTTTAACCCA TGCTTCATGT ACATGGTTAA GGCAAGCTTT GGCTCTACAG GGTGGTTCTC CACCACCTTC
ACACGGTACC GGAATATGAT GCTGGCCGCA GCATATTTCA TCTGGTAGTA TGCAAAATCT TTGCCTAAGC ACAAACGAGG
ACCACCATTG AATGCAGTGA ATTTGTAGGC AGACTCACTC ATGAACCTCC CATCTCTTAG CCACCTTTCT GGCTTGAACT
CCTTCCAGTC CTTCCCCCAT ATGCTCTCCA TTCTTCCCAT TGCATAGATT GCGTAGATCA CTTTTGTTCC TTTCTTTAGT
ACCGTTCCAT CTGGGAATGT GTCATCTTTA ACAACCTGAA AATTTCATAA TTGCAAACTA GCATCACTTC TAAATGCATT
CAATATCACT TTGAATTGTG TGATTTCTCT CACTACAGTA TTTACTACGC ATGTGTGTTT TTCATTGACT TGTCAGATTC
ATGCTTTGCC AGTAAATTTG ACAATTCTAG GATTTCCCAC TCTTTTATGA ATATTTTATG ATTGCCGTTG CCCGTGCCTG
ATTTTTCTAG GGGGCTGCCA AAGAATTGTG GTTGTTAGAT AGACCTAATA ATAGCTAGCA GCTCTGCATC AGCTCCGAGA
ATTTAATAAC TAAGCCGCTT GAAGGAACAG ATTCAAAGAT CAGAACAAAA CATAGGAGTA CACTACTATT TTTTCTGTGT
GTGGGTGTTA TTTCCTACCG AGAATTCTCT TATAATCTAT GTTGACTTTT GATGTAAAAA AATTATTTAA ATTATCCAAA
CAAAGTTTCA GTTCTAATTG AACAGCAACT CTGAAAACAG ACTGTCCTGG CTTTACTAGA CAATGCACAT GTAGTGCTAA
GATGAGTTTT ACATCTCAAA ACAGATATTA ATAACCAAAA TGGAATTACT CGTAAGCTTA TAGCAATTGG AATGGAAAAT
GAATGAGTAT GAAAGAAATT AAATAAATAC CTCCTTGTGA TCCACAGGCA CAGAAGGGTA TAACCTGAGA GCTTCTGATA
AAGCAGCATG CAAATAGTCC ATCTTCTTGA TCTCCTCCGG CCTAAATCTC AAAGAATTAT CAAACTCTTC CCTTTTTATG
TCGTTCCTTT GACTCACCAA CATGCATATC TCTGCTAGAA TATTCTCCTC CACTTCAGGA TTCTGTTCAA GCAACCAGAA
AAACCAACTC AAAGCAACCG AAGAGGTGTC CCTCCCTGCC AATATAAAGT TCACACATAT ATCCCTCAAA AACTTATCCG
AGTAGGGTCT TCCATTCTCA TCCTTCAGCC TCATGAACAC AGTTAACAAA TCTGACCTAT TCTTGGTGTC TTCACATTGC
AAAGAGAGTT CTTTCTTTCT AGTCCGAATG ACATTCTCAG CAAACTCATC AACCCCTTTT ATGGACTTCT TCAGCTTCCT
TTCCACCCCG AGGTTGAGAA GCCTCATGGC CTTCCAAACG CACGTTGGGG TAACAAAACG AAACACTGTG GCTTCTGTTG
CATCCTCAAA GGCTTTGGCA AATGGTATCT TAGGTAAACC CAGGCGCAAA CAACCTGGAT CAACACCAAA GGCAATCATG
CATACATTGT CAAAAGTTAG CCTTAAGAGA ATGTCTTGCA GGTCTATTGC AACCGATTTC TTAACCGATG CCTCTAACAC
AGGCAAGAGC CTATAGTGGA CAAGCTCGAA CAAGGATTCC GTTGTTAATT GTCTGAACTT GGTTGAATGA AACTCAATGC
TTGCTATTTT CCTTTGCTTC TGCCAGGTGT CATCGTCTGC ATTGAATATA CCATCTCCTA GCAGGTCTCT AACCGTGTTC
CTGAAGTATC CTCCCTTAGG GAACAGAGGG AACTTGGTTT TGAGAAGGTG CTCCATGTTG CGAGGATCAG CAGTGACAAT
GCAGTTGAGG TTGCTAAAGC AAGGCCCTTT GAATCTGAAT GTCCCGTTTT GCCTTTTGAG CGCTTCTGTG ATCCATTCAT
ACAAGTTTGT TCTGAGTCCT GTGACCAAAG ATGGAACCAT TCCAAGGACA GGCCAAACGA CTAGGCCATG GAGCCTCTTT
TGTCTAAGAG AATGAATGAG TAGGAAGACA AGAACCGCAA GGAAAATCTC AAAAATTTGG ATGTCTTGCA TGAAGAAGGT
GAGGTTGAGG GTTCTTGGTT TGGTCATGGC GTTGTAATGG AAAGGAATGT GGGAATGCAT GGTATTGGTA TGTTTTGAAG
TGTAATATTG GAGGGTGGTG TTGGTCATGT ATGTTATATG AAGTGGTGCA CAGCATGCCT TGTGTTTCTT GGCGTGCTTA
GTTTTGCATA ATCAGTTTGA TTTGGTGAGC TGAAATGTTT GCAATTGTGT TGGTTTTGGG TATGTTTTCT TGGTTGAAAT
TGTTCCAGGA ATAAGAATGT TTGAACACTG AAAGTTTGAG TGTCAAAATA CCTCGTTTTT GTGGTATGAC TAGGAAGATG
GAAAGTGGAT GTAGCTGATA ACCTAAGTCA GAACTGTTTG TACAGTTTTA ATGTCAC

>Vigan.06G241700.01
ATGGAGAATG TAAGAAGAAA TGCAGAAGCT CTTGTGGAGA AGATGATGAA AGGGAATGAT GCTTCCCATG ACGCAGCTCA
TGTTTGGAGA GTTCGTGATC TTGCTCTATC ACTTGCCGAA GAGGAAGGCC TATCTTCCGA TCCTCACTCC ATGCAAATCG
TTGAGCTTGC TGCACTGCTC CACGACATAG CTGACTACAA ATACCTTAGG GACCCATCTG AGGAAAAAAT TGTTGAGAAT
TTTCTTGACC AAGAGGGAGT TGAGGAGGAC AAGAAATTAA CAATTTTGAG GATCATCAGA GAAATGGGTT TCAAGGAAGA
GGTGACTGGA AATGGAAGTA GTGATTGGTT TCCAGAATTT GGAGTTGTGC AAGATGCTGA TCGACTTGAT GCTATTGGTG
CTATAGGAAT TGCACGTTGC TTCACTTTTG GCGGGAGTAA GAAGAGGTTG CTGCATGATC CCTCCATTCT GCCACGTTCC
GATTTGTCCA AGGAGCAATA CATGAACAAA GAGGAACAGA CTACTATTAA TCATTTTCAT GAGAAGCTTC TCAAGCTCAA
AGATATGATG AAAACCAAGG CTGGGAAAAG GAGGGCTGAA AGAAGGCATA AGTTCATGGA GGAGTTTGTG AAAGAGTTCT
ACGATGAATG GAATGGCTTA AACTGA

>Vigan.06G241700.01
MENVRRNAEA LVEKMMKGND ASHDAAHVWR VRDLALSLAE EEGLSSDPHS MQIVELAALL HDIADYKYLR DPSEEKIVEN
FLDQEGVEED KKLTILRIIR EMGFKEEVTG NGSSDWFPEF GVVQDADRLD AIGAIGIARC FTFGGSKKRL LHDPSILPRS
DLSKEQYMNK EEQTTINHFH EKLLKLKDMM KTKAGKRRAE RRHKFMEEFV KEFYDEWNGL N*