GBrowse Details

Vigan.06G256100.01

Basic Information:
Name: Vigan.06G256100.01
Multiple alignment
Variant Information
Position: Chr06:37810586..37816567 (+ strand)
Length: 5982
Functional Information:
Description: Similar to Uncharacterized protein. [I1L5H6, Glycine max]
GO: Biological Process: intracellular protein transport (GO:0006886)
Cellular Component: Golgi transport complex (GO:0017119)
InterPro: Conserved oligomeric Golgi complex subunit 7 (IPR019335)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:12.67,13.08,16.30,10.40,20.92,10.49,15.74,13.57
Arabidopsis thaliana homolog: AT5G51430.1
Automatic updates:
Name: KM400490 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max embryo yellow protein mRNA, partial cds.
PubMed ID: 25249442 NCBI(pubmed)
Status: Known Variant
Name: KM400500 NCBI(nuccore)
Organism: Medicago truncatula
Description: Medicago truncatula embryo yellow protein mRNA, partial cds.
PubMed ID: 25249442 NCBI(pubmed)
Status: Known Variant
Name: KM400509 NCBI(nuccore)
Organism: Phaseolus vulgaris
Description: Phaseolus vulgaris embryo yellow protein mRNA, partial cds.
PubMed ID: 25249442 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr06:37810586..37810717 (+ strand)
Length: 132
Type: five_prime_UTR
Position: Chr06:37810718..37811002 (+ strand)
Length: 285
Type: CDS
Position: Chr06:37811244..37811333 (+ strand)
Length: 90
Type: CDS
Position: Chr06:37811437..37811556 (+ strand)
Length: 120
Type: CDS
Position: Chr06:37811658..37811759 (+ strand)
Length: 102
Type: CDS
Position: Chr06:37811842..37812122 (+ strand)
Length: 281
Type: CDS
Position: Chr06:37812298..37812443 (+ strand)
Length: 146
Type: CDS
Position: Chr06:37813084..37813282 (+ strand)
Length: 199
Type: CDS
Position: Chr06:37813600..37814269 (+ strand)
Length: 670
Type: CDS
Position: Chr06:37814946..37815272 (+ strand)
Length: 327
Type: CDS
Position: Chr06:37815615..37815896 (+ strand)
Length: 282
Type: CDS
Position: Chr06:37815897..37816567 (+ strand)
Length: 671
Type: three_prime_UTR


>Vigan.06G256100.01
CCGAAGTTTA TGGTAAGGGG TAAACTTGTG CTAGAGAAAC TACCTGTGAC GTAATTGTTT GGCGAGTCTG AAGAGAGAAG
AAAAGAAGAC GATTGTGTGA AGTGGTGAGT TCCTGGATCG GTCGCTGCGA CCATGATGCT AGATTTGGGT CCGTTCTCGA
ACGAGAACTT CGACCCCAAG AAATGGATCA ACTCGGCCTG TCAGAGTCGA CACCCTCAGG ACTCTTTGGA CAAACACCTT
GTGGACATGG AGATGAAGCT GCAGATGGTG TCAGAGGAAA TCGCCGCGTC GCTCGAGGAG CAGAGCTCCG CCGCTCTCCT
CCGTGTCCCC CGCGCCACTC GGGACGTCAT ACGCCTCCGC GACGACGCCG TCTCTCTCCG TTCGGCTGTC TCCTCCATCC
TCCAGAAGCT CAAGAAGGCA GAGGGATCGT CTGCTGAATC TATAGCAGCA CTTGCTAAAG TCGACGTTGT CAAACAGAGG
ATGGAAGCTG CATATGACAC GTTGCAGGAT GCTGCGGGAT TAACTCAATT GAGTTCGACT GTGGAGGATG TATTTGCCAG
TGGAGATCTT CCTCGTGCTG CAGAAACTCT AGCTAACATG AGGCATTGCT TGTCAGCAGT TGGGGAGGTT GCTGAATTTG
CCAACATAAG AAAGCAACTC GAAGTCTTGG AGGATAGGCT AGACACGATG GTGCAGCCTC GTATCACAGA CGCGTTATCT
AATCGCAAGG CCGATGTTGC TCAAGATTTA CGGTCTATTC TCATTAGAAT TGGAAGGTTT AAGTCTCTGG AATCACAATA
TATAAAGGTT CATCTGAAAC CAATTAAGCA GCTTTGGGAA GATTTTGATT CTAGAGAACG AGGTAATAAG TCTGCTGTTG
AGAAAAATGA GATGGAGAGG ATATCCAGCA GTGGTGATTT TCATTCAGTT TCACCTGCAA TACCATTCTC CACTTGGCTA
CCAAGCTTTT ATGACGAGCT ACTGCTTTAC CTTGAACAAG AGTGGAAATG GTGCATGGTT GCTTTTCCTG AAGATTATAA
AACTCTTGTA CCGAGGCTAC TAAGTGAGAC TATGATGACT ATAGGAACCA GCTTCCAATC TCGTATCAAC ATTGCCATTG
GAGATGCTGT TCCAGAAACA AAAGCACTGG CTAAAGGTTT ACTAGATACT TTAGCGTGCG ATATGCATAA AGGCATTAAG
ATTCAAACAA AGCATCTTGA GGCCTTGATT GAATTGCACA ACATGACTGG GACCTTTGCG AGGAATATTC AACACTTATT
TTCTGTTTCT GATATCCGAG TTTTAAGGGA TGTGCTGAAA GCTGTGTACT TGCCTTACGA ATTGTTTAAA CAGAGGTATG
GACAAATGGA GCGCGCCATC CTTTCCTCTG AGATTGCCGG AGTAGACTTA AGAGGAGCTG TTATTCGAGG GGTGGGAGCC
CAAGGAGTTG AACTCAGTGA AACAGTTCGT AGGATGGAGG AATCTATTCC TCAAATAATT ATACTTCTTG AAGCAGCTGC
AGAGAGATGC ATCAACTTCA CTGGAGGTTC TGAGGCAGAT GAACTGATTC TTGCCCTTGA TGACATAATG TTACAATACA
TTTCCTCTCT GCAAGAAACA CTTAAGTCAC TGCGAACTGT CTGTGGTGTG GATTATGGAA GTGATGGTAC TTTTAAGAAG
GACACAGAGA AGAAGGATGG AAACCAAAAT TCTCGGAGAG TTGATTTGAT CTCAAATGAG GAGGAATGGT CCATAGTCCA
AGGGGCATTG CAAATCCTGA CAGTTGCAGA TACTTTGACA AGCAGATCTT CTGTATTTGA AGCATCTTTA AGAGCCACTC
TTGCTAGATT GAGCACAACC CTATCTTTTT CTGCATTTGG TTCAGCTCTA GACCAAAACC AGACTATTAA TAATAGTGTA
GAAGGGGAAC CATCTTATGG CGGAAGGGCT GCCTTGGATA TGGCAACACT GCGGTTGGTT GATGTGCCTG AGAAGGCCAG
GAGACTCTTT AACCTTTTGA ATCAGTCTAA AGATCCCCGA TTTCACGCCC TTCCCCTTGC ATCTCAAAGA GTTGCAGCAT
TTGCAGACAC GGTTAACGAA CTTGTATATG ATGTCCTCAT ATCCAAAGTG CGGCAACGCC TCAGTGATGT GTCCCGTATG
TCAATTTGGT CATCAGTTGA GGAACAAGGA AACTTTCCTC TCCCTACCTT CAGTGCATAT CCACAGTCCT ATGTTACTAG
TGTTGGTGAA TATCTTCTTA CTTTACCCCA ACAACTGGAG CCACTTGCTG AGGGAATTAA CAATGAAGTC AATGATGAAG
CGCAGTTCTT TGCAACTGAA TGGATGTTCA AGGTTGCAGA GGGTGCTACT GCACTTTACA TCGAGCAGTT GCGTGGGATT
CAACACATTT CAGATCGTGG AGCACAGCAG CTATCAGTTG ATATTGAGTA TCTCAGTAAT GTGCTTTCTG CTCTATCAAT
GCCAATTCCT CCAGTTCTGG CTACATTCCA AAGTTGTCTT TCTTCTCCAA GAAACCAACT ACAAGATCTT TTAAAGACAG
ATTCAGGAAA CCATCTTGAT ATGCCAACAG CAAACCTTGT TTGTAAGATG CGACGAGTGA ATTTGGACTC ATGAGTGTTC
CTTACTAAAC TTCAGCAATC GAGCCCATTG CACCCACTCT CTCTCCAGAT ATGTGTTTTT CCCTTGCAGA GGAGATATTC
TTTTACAACG GCAGTGCTCA CATGCAGTTA TTCTGTTTAG TACACGGTTT TAAAAATGAA GACATTGGAT CCGTATGTTA
TGAAAAATAT ATGAATAAGT TCCACAAAGA AAGAATAAGT TCAACAAATC ATCAAAGAAA AAGTTGAACA AGAGAGAGAA
AAAGCTGGAT AACAGAAGAG AGAAGAGAAA AAATACGGCC ACATCAGCAT GGACTTAATG CCGTTGTTGT CAACTTAACA
GGAAGAATCT TGTTCATACA CTTTTCATAA CATAGGGACT CAATATCTTC ATTTTTAAAA TCGGATAATA AACAAAAATT
CACCTCTTAA CAGGAGGATG AAGTAAGCAT TTAAGTTTAA TTAATTACGT TAGAGGCAAT TATTTATTTA TTAATTATGT
TTTATATATG TATGCATGGA AAGACCCTTA GAGGCATTTA AGTTATTTGA GAAACGTAAA GAAAATATTT GTCGTTTCTT
TTGGTGTACA TTAAATATTA TGGAGGTTGT CAAAAAATAT TTGTCAAGAA GATTGTTTTT TTAGTTTTAA TATATTTGAG
GATAAAAAGG GTTGGCGTTA ATTTG

>Vigan.06G256100.01
ATGATGCTAG ATTTGGGTCC GTTCTCGAAC GAGAACTTCG ACCCCAAGAA ATGGATCAAC TCGGCCTGTC AGAGTCGACA
CCCTCAGGAC TCTTTGGACA AACACCTTGT GGACATGGAG ATGAAGCTGC AGATGGTGTC AGAGGAAATC GCCGCGTCGC
TCGAGGAGCA GAGCTCCGCC GCTCTCCTCC GTGTCCCCCG CGCCACTCGG GACGTCATAC GCCTCCGCGA CGACGCCGTC
TCTCTCCGTT CGGCTGTCTC CTCCATCCTC CAGAAGCTCA AGAAGGCAGA GGGATCGTCT GCTGAATCTA TAGCAGCACT
TGCTAAAGTC GACGTTGTCA AACAGAGGAT GGAAGCTGCA TATGACACGT TGCAGGATGC TGCGGGATTA ACTCAATTGA
GTTCGACTGT GGAGGATGTA TTTGCCAGTG GAGATCTTCC TCGTGCTGCA GAAACTCTAG CTAACATGAG GCATTGCTTG
TCAGCAGTTG GGGAGGTTGC TGAATTTGCC AACATAAGAA AGCAACTCGA AGTCTTGGAG GATAGGCTAG ACACGATGGT
GCAGCCTCGT ATCACAGACG CGTTATCTAA TCGCAAGGCC GATGTTGCTC AAGATTTACG GTCTATTCTC ATTAGAATTG
GAAGGTTTAA GTCTCTGGAA TCACAATATA TAAAGGTTCA TCTGAAACCA ATTAAGCAGC TTTGGGAAGA TTTTGATTCT
AGAGAACGAG GTAATAAGTC TGCTGTTGAG AAAAATGAGA TGGAGAGGAT ATCCAGCAGT GGTGATTTTC ATTCAGTTTC
ACCTGCAATA CCATTCTCCA CTTGGCTACC AAGCTTTTAT GACGAGCTAC TGCTTTACCT TGAACAAGAG TGGAAATGGT
GCATGGTTGC TTTTCCTGAA GATTATAAAA CTCTTGTACC GAGGCTACTA AGTGAGACTA TGATGACTAT AGGAACCAGC
TTCCAATCTC GTATCAACAT TGCCATTGGA GATGCTGTTC CAGAAACAAA AGCACTGGCT AAAGGTTTAC TAGATACTTT
AGCGTGCGAT ATGCATAAAG GCATTAAGAT TCAAACAAAG CATCTTGAGG CCTTGATTGA ATTGCACAAC ATGACTGGGA
CCTTTGCGAG GAATATTCAA CACTTATTTT CTGTTTCTGA TATCCGAGTT TTAAGGGATG TGCTGAAAGC TGTGTACTTG
CCTTACGAAT TGTTTAAACA GAGGTATGGA CAAATGGAGC GCGCCATCCT TTCCTCTGAG ATTGCCGGAG TAGACTTAAG
AGGAGCTGTT ATTCGAGGGG TGGGAGCCCA AGGAGTTGAA CTCAGTGAAA CAGTTCGTAG GATGGAGGAA TCTATTCCTC
AAATAATTAT ACTTCTTGAA GCAGCTGCAG AGAGATGCAT CAACTTCACT GGAGGTTCTG AGGCAGATGA ACTGATTCTT
GCCCTTGATG ACATAATGTT ACAATACATT TCCTCTCTGC AAGAAACACT TAAGTCACTG CGAACTGTCT GTGGTGTGGA
TTATGGAAGT GATGGTACTT TTAAGAAGGA CACAGAGAAG AAGGATGGAA ACCAAAATTC TCGGAGAGTT GATTTGATCT
CAAATGAGGA GGAATGGTCC ATAGTCCAAG GGGCATTGCA AATCCTGACA GTTGCAGATA CTTTGACAAG CAGATCTTCT
GTATTTGAAG CATCTTTAAG AGCCACTCTT GCTAGATTGA GCACAACCCT ATCTTTTTCT GCATTTGGTT CAGCTCTAGA
CCAAAACCAG ACTATTAATA ATAGTGTAGA AGGGGAACCA TCTTATGGCG GAAGGGCTGC CTTGGATATG GCAACACTGC
GGTTGGTTGA TGTGCCTGAG AAGGCCAGGA GACTCTTTAA CCTTTTGAAT CAGTCTAAAG ATCCCCGATT TCACGCCCTT
CCCCTTGCAT CTCAAAGAGT TGCAGCATTT GCAGACACGG TTAACGAACT TGTATATGAT GTCCTCATAT CCAAAGTGCG
GCAACGCCTC AGTGATGTGT CCCGTATGTC AATTTGGTCA TCAGTTGAGG AACAAGGAAA CTTTCCTCTC CCTACCTTCA
GTGCATATCC ACAGTCCTAT GTTACTAGTG TTGGTGAATA TCTTCTTACT TTACCCCAAC AACTGGAGCC ACTTGCTGAG
GGAATTAACA ATGAAGTCAA TGATGAAGCG CAGTTCTTTG CAACTGAATG GATGTTCAAG GTTGCAGAGG GTGCTACTGC
ACTTTACATC GAGCAGTTGC GTGGGATTCA ACACATTTCA GATCGTGGAG CACAGCAGCT ATCAGTTGAT ATTGAGTATC
TCAGTAATGT GCTTTCTGCT CTATCAATGC CAATTCCTCC AGTTCTGGCT ACATTCCAAA GTTGTCTTTC TTCTCCAAGA
AACCAACTAC AAGATCTTTT AAAGACAGAT TCAGGAAACC ATCTTGATAT GCCAACAGCA AACCTTGTTT GTAAGATGCG
ACGAGTGAAT TTGGACTCAT GA

>Vigan.06G256100.01
MMLDLGPFSN ENFDPKKWIN SACQSRHPQD SLDKHLVDME MKLQMVSEEI AASLEEQSSA ALLRVPRATR DVIRLRDDAV
SLRSAVSSIL QKLKKAEGSS AESIAALAKV DVVKQRMEAA YDTLQDAAGL TQLSSTVEDV FASGDLPRAA ETLANMRHCL
SAVGEVAEFA NIRKQLEVLE DRLDTMVQPR ITDALSNRKA DVAQDLRSIL IRIGRFKSLE SQYIKVHLKP IKQLWEDFDS
RERGNKSAVE KNEMERISSS GDFHSVSPAI PFSTWLPSFY DELLLYLEQE WKWCMVAFPE DYKTLVPRLL SETMMTIGTS
FQSRINIAIG DAVPETKALA KGLLDTLACD MHKGIKIQTK HLEALIELHN MTGTFARNIQ HLFSVSDIRV LRDVLKAVYL
PYELFKQRYG QMERAILSSE IAGVDLRGAV IRGVGAQGVE LSETVRRMEE SIPQIIILLE AAAERCINFT GGSEADELIL
ALDDIMLQYI SSLQETLKSL RTVCGVDYGS DGTFKKDTEK KDGNQNSRRV DLISNEEEWS IVQGALQILT VADTLTSRSS
VFEASLRATL ARLSTTLSFS AFGSALDQNQ TINNSVEGEP SYGGRAALDM ATLRLVDVPE KARRLFNLLN QSKDPRFHAL
PLASQRVAAF ADTVNELVYD VLISKVRQRL SDVSRMSIWS SVEEQGNFPL PTFSAYPQSY VTSVGEYLLT LPQQLEPLAE
GINNEVNDEA QFFATEWMFK VAEGATALYI EQLRGIQHIS DRGAQQLSVD IEYLSNVLSA LSMPIPPVLA TFQSCLSSPR
NQLQDLLKTD SGNHLDMPTA NLVCKMRRVN LDS*