GBrowse Details

Vigan.06G256400.01

Basic Information:
Name: Vigan.06G256400.01
Multiple alignment
Variant Information
Position: Chr06:37826012..37829127 (+ strand)
Length: 3116
Functional Information:
Description: Similar to Uncharacterized protein. [C6SY80, Glycine max]
InterPro: Uncharacterised protein family Cys-rich (IPR006461)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:86.06,51.23,32.23,29.97,32.41,73.45,61.03,26.54
Automatic updates:
Name: BT090127 NCBI(nuccore)
Organism: Glycine max
Description: Soybean clone JCVI-FLGm-3P5 unknown mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001252903 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max cell number regulator 6-like (LOC100797735), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr06:37826012..37826219 (+ strand)
Length: 208
Type: five_prime_UTR
Position: Chr06:37826220..37826324 (+ strand)
Length: 105
Type: CDS
Position: Chr06:37826960..37827074 (+ strand)
Length: 115
Type: CDS
Position: Chr06:37827564..37827838 (+ strand)
Length: 275
Type: CDS
Position: Chr06:37828531..37828758 (+ strand)
Length: 228
Type: CDS
Position: Chr06:37828759..37829127 (+ strand)
Length: 369
Type: three_prime_UTR


>Vigan.06G256400.01
AAAGAAAGGT ATGACCGAGG AGAGTTGACT AGAGTAAGCA GCGTTCCAAC GCTGTTTCCT TTCTTTTCTT CTCCCAAGTC
CGAGACGAGA TCTACTACAT CGTTGTTCTG TTGCTCCGAA ATCCTTCAGA TCTTGTCCGT TTTCTGGCTC TGCTTTCTCG
GCGTCTAAAC TGCATCGTTT TGGCGTTGAT AATCGTGGAA TTGGGGAGAT GGAAGAACGG AAGCAATCGC GTTATGTGAA
GTTGACCAAA GATCAGACAC CTGTCGAAGA TATTACCCCT GGCGAACTCA ATCAGCCAAT ACAGGTTCCT CAGTTGGATG
TTCGCAAGTG CCCTGAATGC AGACAGCCGC TACCTGAAAG TTATGCACCT CCTGCAGATG AACCTTGGAT GACTGGGATC
TTTGGATGTG CTGAAGACAG AGAAAGCTGC TTGACTGGAC TGTTTTGTCC TTGTGTATTA TTTGGGCGCA ATGTAGAAAG
ATTGAAGGAA GACACTCCTT GGACTGGGCC ATGTATTTGT CATGCCATTT TTATTGAAGG TGGCATTTCT CTGGCAATAG
CAACTGCAGC TGCAACTTCC TTCTTTCCTG TTGACCCAGG GACTGTATGT CTCATTGTTG AGGGTTTATT TTTTACATGG
TGGATGTGTG GCATTCACAC TGGTCAAGTG CGGCAATCCT TACAGAAGAA ATATCACTTG AAGAATTCAC CGTGTAATGC
ATGTTGTGTG CATTGCTGCT TGCACTGGTG TGCCTTGTGT CAGGAACACA GGGAGATGAA TGGAAGGCTC TCAGACAACA
TGTTTTCAGA AATGACCGTT GTAAACCCTC CTCCCATTCA AGAGATGAAA TCTACAGATG AGAAGGAAAC TGCTGAAACG
TCTTCACCCA ACAACAACGA TCATACTGAT TTGGAGATAC AGGCTGTATA AGGAAGGCAT AGCATTGTTA ATATCATGAG
ATTGGGGATA CCATGCGTTC TTAATAGGGA TTTTTTTTTT CTTTTGACCT TTTACTGGAG TTCTTTCTTC CTGCTTCATT
GGACGATTCA CATGTAGGTT TATCACATAA ACACAACTTT CTTTGGCTTT ATACAGCCTA ATTATACCGA ATCCTTAGTT
TTAAATTTCT TTTCCAGTTT CAACCATTAC ACATCACATC ACGCAACATC TGCCAGTAAC TTTCTTTTGA TTTTTTTTTC
GGTTTATTTT TCGTATTTAT TTATTTCAAT CAAGATGTTA ACAGCTGAAT TATTTTAAAA AAAATCAGCT TCTAATTGAT
CATTCTGGTG AAGTGCTAAA 

>Vigan.06G256400.01
ATGGAAGAAC GGAAGCAATC GCGTTATGTG AAGTTGACCA AAGATCAGAC ACCTGTCGAA GATATTACCC CTGGCGAACT
CAATCAGCCA ATACAGGTTC CTCAGTTGGA TGTTCGCAAG TGCCCTGAAT GCAGACAGCC GCTACCTGAA AGTTATGCAC
CTCCTGCAGA TGAACCTTGG ATGACTGGGA TCTTTGGATG TGCTGAAGAC AGAGAAAGCT GCTTGACTGG ACTGTTTTGT
CCTTGTGTAT TATTTGGGCG CAATGTAGAA AGATTGAAGG AAGACACTCC TTGGACTGGG CCATGTATTT GTCATGCCAT
TTTTATTGAA GGTGGCATTT CTCTGGCAAT AGCAACTGCA GCTGCAACTT CCTTCTTTCC TGTTGACCCA GGGACTGTAT
GTCTCATTGT TGAGGGTTTA TTTTTTACAT GGTGGATGTG TGGCATTCAC ACTGGTCAAG TGCGGCAATC CTTACAGAAG
AAATATCACT TGAAGAATTC ACCGTGTAAT GCATGTTGTG TGCATTGCTG CTTGCACTGG TGTGCCTTGT GTCAGGAACA
CAGGGAGATG AATGGAAGGC TCTCAGACAA CATGTTTTCA GAAATGACCG TTGTAAACCC TCCTCCCATT CAAGAGATGA
AATCTACAGA TGAGAAGGAA ACTGCTGAAA CGTCTTCACC CAACAACAAC GATCATACTG ATTTGGAGAT ACAGGCTGTA
TAA

>Vigan.06G256400.01
MEERKQSRYV KLTKDQTPVE DITPGELNQP IQVPQLDVRK CPECRQPLPE SYAPPADEPW MTGIFGCAED RESCLTGLFC
PCVLFGRNVE RLKEDTPWTG PCICHAIFIE GGISLAIATA AATSFFPVDP GTVCLIVEGL FFTWWMCGIH TGQVRQSLQK
KYHLKNSPCN ACCVHCCLHW CALCQEHREM NGRLSDNMFS EMTVVNPPPI QEMKSTDEKE TAETSSPNNN DHTDLEIQAV
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