GBrowse Details

Vigan.06G262900.01

Basic Information:
Name: Vigan.06G262900.01
Multiple alignment
Variant Information
Position: Chr06:38252160..38258591 (+ strand)
Length: 6432
Functional Information:
Description: Similar to Uncharacterized protein. [I1L5N2, Glycine max]
GO: Biological Process: chromatin organization (GO:0006325)
Biological Process: developmental process (GO:0032502)
Cellular Component: nucleus (GO:0005634)
InterPro: Actin-related protein (IPR004000)
Actin-related protein 7, plant (IPR027678)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:76.03,34.48,12.31,33.55,9.60,13.43,14.90,17.56
Arabidopsis thaliana homolog: AT3G60830.1
Automatic updates:
Name: NM_001254458 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max actin-related protein 7-like (LOC100813266), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr06:38252160..38252359 (+ strand)
Length: 200
Type: five_prime_UTR
Position: Chr06:38252360..38252437 (+ strand)
Length: 78
Type: CDS
Position: Chr06:38253655..38253870 (+ strand)
Length: 216
Type: CDS
Position: Chr06:38254117..38254258 (+ strand)
Length: 142
Type: CDS
Position: Chr06:38255062..38255306 (+ strand)
Length: 245
Type: CDS
Position: Chr06:38255915..38256098 (+ strand)
Length: 184
Type: CDS
Position: Chr06:38257864..38257931 (+ strand)
Length: 68
Type: CDS
Position: Chr06:38258065..38258217 (+ strand)
Length: 153
Type: CDS
Position: Chr06:38258218..38258591 (+ strand)
Length: 374
Type: three_prime_UTR


>Vigan.06G262900.01
ATTATATAGA AACATATTAT GTTATTTAGT GGAAAAAAAT ATATCATGCT TGAGAAATAA GAGTGTTGAT ATGATAATTG
AGTGTGACTG AGAGGCTTAG AAGGAAGAGA GGTTGAAGTG AAGGAAGAAG CGAAGAGGTT GTTTGTTAAG GAGAGAAGAT
TCAGATTAGG GATTAGGGTT TAGTTTCAGT TAAGGAAGCG ATGGAAGCGG CGGTGGTGGA CGTCGGTTCT AAGCTTCTCA
AAGCCGGTTT TGCAATTCCC GACCAGACTC CGGCCATGAT AATTCCCACT AAAATGAAAC AACTGCTTGA TGATGGATCG
GCCACTGATA GCTCACTGGC TGAAAATGTC ACTGTTGATC CAGTTGTGCG GGGATTTATT AGAGATTGGG ATGCCATTGA
GGATTTGTTG CAGCATGTTT TATATACTGG TCTGGGATGG GAAATTGGCA ATGAAGGTCA AATACTCTTT ACAGATCCAC
TTTGTACCCC AAAGGCCAAC AAAGAACAGT TGGTGCAATT AATGTTTGAA ACATTCAACA TATCAGGGTT TTATGCTTCA
GAACAAGCAG TGTTATCACT GTATGCTGTG GGACGTATCT CAGGCTGCAC TGTTGATATT GGACATGGAA AAATAGATAT
TGCACCAGTA ATTGAGGGTG CTGTTCACCA TATTGCCTCA AGAAGATTTG AATTTGGAGG TATTGATCTA ACTAATTTCC
TAGCTCAAGA ACTAGGCAAG ACCAATCCAA AAGTAAATAT CAGCCTGTCT GATGTGGAGA AAATGAAAGA GCAGTACTCA
TGCTGTGCTG TAGATGAGTT AGCTTATCAA AAGACCCAAT ATTTGTGTCC TGTGGAGGAG CATACCCTTC CTGATGGACA
GGTGATAAGA ATTGGGAGAG AAAGATTTAC GGTCGGGGAA GCTTTATTCC GGCCATGTCT ATTGGGTTTA GAGGCTCATG
GCATTGTTGA TCAGCTTGTC CGTGCTATTT CAACTGTGTC ATCTGATAAT CAACGACAGC TGCTGGAGAA TACGGTGGTT
TGTGGTGCCA CTTCATCTAT GGCAGGTTTT GAAGAGAGAT TTCAAAAAGA ATCTAGCTTA AGTTCATCTG CCGTTCAACC
TACCCTTGTT AAGCCTCCAG AATACATGCC AGAAAATTTA ACCATGTATT CTGCATGGGT GGGAGGTGCA ATACTTGCGA
AAGTCGTTTT CCCTCAAAAT CAGCATATAA CCAAGGCAGA CTATGATGAA ACCGGACCTT CCATTATTCA CCGGAAATGC
TTCTGAAATT ATTCATCTCC AGGATTTCAA CAATTGTTTA TTCCGCTGCT TGTACCGGTA CTGTAACATA TCGTATCCTG
TAGATTTTAA ATGCTTGATG TCCATGTGCG TGTATATTGT AAAAGCTGTA GCAATCTCCA TTAAGGCAAT CTTCTCACTT
TTTCTCCCCT CCAAAAAAAT TCTTCTCACC ATCGTGAGTT CCTAAGTTGC AGTAGAAGAT TTCCATGAAT ACTTGTTCCT
CAGAAATGTA TATATGTGGA AGCTTGCATA TCTTTTGCAA TGTGGATATC CTTGTAAAAT ATTCATTTCT TTGTAACCTT
GTAGGCTGTG GCTACTGGCT ACATCCCTTC TAGTAGAACC CCTTGTTCCT ATAATAGTTT 

>Vigan.06G262900.01
ATGGAAGCGG CGGTGGTGGA CGTCGGTTCT AAGCTTCTCA AAGCCGGTTT TGCAATTCCC GACCAGACTC CGGCCATGAT
AATTCCCACT AAAATGAAAC AACTGCTTGA TGATGGATCG GCCACTGATA GCTCACTGGC TGAAAATGTC ACTGTTGATC
CAGTTGTGCG GGGATTTATT AGAGATTGGG ATGCCATTGA GGATTTGTTG CAGCATGTTT TATATACTGG TCTGGGATGG
GAAATTGGCA ATGAAGGTCA AATACTCTTT ACAGATCCAC TTTGTACCCC AAAGGCCAAC AAAGAACAGT TGGTGCAATT
AATGTTTGAA ACATTCAACA TATCAGGGTT TTATGCTTCA GAACAAGCAG TGTTATCACT GTATGCTGTG GGACGTATCT
CAGGCTGCAC TGTTGATATT GGACATGGAA AAATAGATAT TGCACCAGTA ATTGAGGGTG CTGTTCACCA TATTGCCTCA
AGAAGATTTG AATTTGGAGG TATTGATCTA ACTAATTTCC TAGCTCAAGA ACTAGGCAAG ACCAATCCAA AAGTAAATAT
CAGCCTGTCT GATGTGGAGA AAATGAAAGA GCAGTACTCA TGCTGTGCTG TAGATGAGTT AGCTTATCAA AAGACCCAAT
ATTTGTGTCC TGTGGAGGAG CATACCCTTC CTGATGGACA GGTGATAAGA ATTGGGAGAG AAAGATTTAC GGTCGGGGAA
GCTTTATTCC GGCCATGTCT ATTGGGTTTA GAGGCTCATG GCATTGTTGA TCAGCTTGTC CGTGCTATTT CAACTGTGTC
ATCTGATAAT CAACGACAGC TGCTGGAGAA TACGGTGGTT TGTGGTGCCA CTTCATCTAT GGCAGGTTTT GAAGAGAGAT
TTCAAAAAGA ATCTAGCTTA AGTTCATCTG CCGTTCAACC TACCCTTGTT AAGCCTCCAG AATACATGCC AGAAAATTTA
ACCATGTATT CTGCATGGGT GGGAGGTGCA ATACTTGCGA AAGTCGTTTT CCCTCAAAAT CAGCATATAA CCAAGGCAGA
CTATGATGAA ACCGGACCTT CCATTATTCA CCGGAAATGC TTCTGA

>Vigan.06G262900.01
MEAAVVDVGS KLLKAGFAIP DQTPAMIIPT KMKQLLDDGS ATDSSLAENV TVDPVVRGFI RDWDAIEDLL QHVLYTGLGW
EIGNEGQILF TDPLCTPKAN KEQLVQLMFE TFNISGFYAS EQAVLSLYAV GRISGCTVDI GHGKIDIAPV IEGAVHHIAS
RRFEFGGIDL TNFLAQELGK TNPKVNISLS DVEKMKEQYS CCAVDELAYQ KTQYLCPVEE HTLPDGQVIR IGRERFTVGE
ALFRPCLLGL EAHGIVDQLV RAISTVSSDN QRQLLENTVV CGATSSMAGF EERFQKESSL SSSAVQPTLV KPPEYMPENL
TMYSAWVGGA ILAKVVFPQN QHITKADYDE TGPSIIHRKC F*