GBrowse Details

Vigan.07G022000.01

Basic Information:
Name: Vigan.07G022000.01
Multiple alignment
Variant Information
Position: Chr07:1518235..1521160 (+ strand)
Length: 2926
Functional Information:
Description: Similar to Uncharacterized protein. [Q2HU50, Medicago truncatula]
InterPro: Uncharacterised protein family Cys-rich (IPR006461)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.42,0.28,0.23,0.24,0.21,0.00,5.83,0.12
Arabidopsis thaliana homolog: AT1G52200.1
Automatic updates:
Name: NM_001254589 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max FWL family protein FWL8 (GMFWL8), mRNA.
PubMed ID: 20230508 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr07:1518235..1518543 (+ strand)
Length: 309
Type: five_prime_UTR
Position: Chr07:1519088..1519160 (+ strand)
Length: 73
Type: five_prime_UTR
Position: Chr07:1519435..1519466 (+ strand)
Length: 32
Type: five_prime_UTR
Position: Chr07:1519467..1519647 (+ strand)
Length: 181
Type: CDS
Position: Chr07:1519738..1519829 (+ strand)
Length: 92
Type: CDS
Position: Chr07:1519830..1521160 (+ strand)
Length: 1331
Type: three_prime_UTR


>Vigan.07G022000.01
CTGCCCTTTC ATACTCCAAT GCTCTTTTAA AGGCTGTAGA TTCATTCATT TATTTATTTC TAAGTCCAGC AGCATTTGCA
AGAGCAATCT GCTCTGCGTT CGGTTTAATT CAAGGCTTCC TTCATTGTTG GTTTTTGTCA GAACTTTTCA AGAAAGAAAA
AGGCGAGATG CAGGCCAGTG AGGATCAGAA GATTCAACAG AATGAAGCCG TTGGTTCATT TGCTCCAAGG TATGAAGCTG
ATACTTTTCA GCCAATAGGG AGTCCATGGA GCACTGGACT ATTTGACTGT CATGAGAATC AGACAAATGC TGTTATGACA
TCATTTTTCC CGTGTGTAAC ATTATGGGCA GACAGCAGAA ATATTAGATG GCGGAGAACT TAGTTGTCAT CTGGGGAGCT
TCATTTACCT ATTAATGATG CCTGCTTTGT GCTCTCAATG GATAATGGGG TCAAAGTACA GAACAAAGTT GAGAAAGAGG
TATAATTTGG TTGAAGCACC ATACACAGAC ATAGTCTCTC ACATATTTTG TCCATGTTGT TCCCTTTGTC AAGAGTTCAG
AGAGCTAAAA ATCAGAGGAC TTGACCCTGC TCTTGGATGG AATGGAATTC TTGCACAAAA GCATGCAAAA CAGCAAAGTG
ATCAAACACT GAACAATCCT CCTTCAAACC AATTCATGTC CAAGTGAACA CATTCACGGT GGAGCTGTTA AAATTAAACT
GAGTTGTATT TCTTTTGATT CGTTCTGTGC TTGTTTACTT TTTCATGTCT GATACTTGTG TCTGAATTCT AAGAAAGAAA
ATAAAGCCGA AAGGTGGCAA GTTTGGTATG ATAAGTATAT CACTGTATAA ATTGTTGCAT CCATTCTTAC ATGGAGGAGA
GTCTTACTGT ATAAAATCTT TGGAAGAATA TAAAGTAATA TAAGATTTGT ACCTTTTACT AATATTCAAG ACGCAACTGC
CAAATATCTT ATTCATGAAT GCAACTTGTA CAAAACATGG TTTTTTCTAT ATAGTACTAC AGTACACAGA AGCTGATCAT
TAAAAAAAAG GTTAGAATAT CCAAATTATG TATAAAAACA TTTAAGTGAA CAATTATTGG GTTTCATTAC ATTGCCTCTT
GTTGTTGATC ATGAACCATG TTCCCTCTTT CTTCCTTCTT TGAGACTGCT TCAGCACTAA GGCCATAAGC CCAACTGCAA
ACCAAATAGT AAAGAGTATT AACAGCACTC AGTATGGAAA GAAGCCAATA ATACTTGTCA TAGTGACCCT TGTTAATGTT
ATCTGAAACC CAACTCTGTT TTCCACCTTT GGAAGTAATG TTATCCACAG TGCTGAGTAT AAGAGAAGCC ACCAAGTTTC
CCACAGCAGA TCCTAGGCTG AATAGAGATG CAGCAATGCT TGACATGCTA CGTGGAAACT CAGAGTAATA GAACTCTGAT
TGCCCCATTG CATTAAAGGC TTCTGCTATA CCACACAGAA TATTATGTGG GATAAGCCAC ATTGCAGACA TCTCCAAGAC
TGCCTCAGGA TTATCAACAA ACCCCTCTCC TATTGCTTTC CTCCTCCTTA TACTCTCAAC AATTGCCGAA GTCACAAAGT
CCAAAAAGGA GAAAAACAGT CCAATTCCTA TTCTTCTTTT GGCACCGATG CTTACTGGTT TTCCTCTCAC TTTTGAAGCT
AGAGGAAGGA TGACACGATC ATAGACACCC GCAGTCATGC ACACTGCAAG CATCATGAAC ACACCGAAAG AGCCCGCTGG
AATTTGGAAG TTTGAAGTGA CCTGTCTGTT CATGGTTTTA GCTTGGAGCA ACCAAAGTGA TGCTGGCTTG TGCTAACTGC
CACCATGATA CCGGTCGACC AAATGGGAAT AACCTTAATG ATTGCCTTCA GTTCTTCCAC TTGCTCTATT GTGCAAAGAC
TCCATTTTTT TGAAGCCGAC CCATCAGAGG CTATATCCCG TTCTCTGTCT CTGATGATGC AAGCTTTGTT TAGAAACCTA
CAAACAGTAA GCATCACC

>Vigan.07G022000.01
ATGATGCCTG CTTTGTGCTC TCAATGGATA ATGGGGTCAA AGTACAGAAC AAAGTTGAGA AAGAGGTATA ATTTGGTTGA
AGCACCATAC ACAGACATAG TCTCTCACAT ATTTTGTCCA TGTTGTTCCC TTTGTCAAGA GTTCAGAGAG CTAAAAATCA
GAGGACTTGA CCCTGCTCTT GGATGGAATG GAATTCTTGC ACAAAAGCAT GCAAAACAGC AAAGTGATCA AACACTGAAC
AATCCTCCTT CAAACCAATT CATGTCCAAG TGA

>Vigan.07G022000.01
MMPALCSQWI MGSKYRTKLR KRYNLVEAPY TDIVSHIFCP CCSLCQEFRE LKIRGLDPAL GWNGILAQKH AKQQSDQTLN
NPPSNQFMSK *