GBrowse Details

Vigan.07G031000.01

Basic Information:
Name: Vigan.07G031000.01
Multiple alignment
Variant Information
Position: Chr07:2175949..2177787 (+ strand)
Length: 1839
Functional Information:
Description: Similar to Uncharacterized protein. [I1KUW1, Glycine max]
GO: Biological Process: metabolic process (GO:0008152)
Molecular Function: phosphatase activity (GO:0016791)
InterPro: HAD-superfamily hydrolase, subfamily IB, PSPase-like (IPR006383)
Pyridoxal phosphate phosphatase-related (IPR006384)
Phosphatase PHOSPHO-type (IPR016965)
HAD-like domain (IPR023214)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.11,0.00,7.97,1.33,5.34,1.82,2.57,14.74
Automatic updates:
Name: NM_001255903 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max inorganic pyrophosphatase 2-like (LOC100789743), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr07:2175949..2175999 (+ strand)
Length: 51
Type: five_prime_UTR
Position: Chr07:2176000..2176137 (+ strand)
Length: 138
Type: CDS
Position: Chr07:2176240..2176361 (+ strand)
Length: 122
Type: CDS
Position: Chr07:2176513..2176714 (+ strand)
Length: 202
Type: CDS
Position: Chr07:2177214..2177588 (+ strand)
Length: 375
Type: CDS
Position: Chr07:2177589..2177787 (+ strand)
Length: 199
Type: three_prime_UTR


>Vigan.07G031000.01
AGACAGTATC AACCCATTTA GGCATTACAA AGATAAGCTT TTGCACACTC AATGGCTGGG ATTGTGGTGG TTTTTGACTT
CGACTCAACA ATCATCGAAT GCGATAGTGA TAACTGGGTT CTTGATGAGT TTGGTCTAAC CGAAAAGTTC TATGAGTTTC
TTCCTAACAC GCTTTGGAAC CCTCTCATGG ATAAGATGAT GTACGAACTT CATTCACAAG GAAAAACCAT TGAAGACATT
GTACAAGTTC TGAATAGGAC TCCAATGCAT CCCCGCATTG TCCCAGCCAT AGAAGCAGCG TATTCCCTTG GGTGCGAGTT
GAAGATTGTG AGCGATGCAA ATAGTTTCTT TATTGAAACA ATTTTGAAGC ATCATGGGGT TTGGAATTGT TTCTCGGAGA
TCACTGCAAA CCCCAGCTAT GTTAATGAAG AAGGGATTCT CAGAGTTTGC CCCTACCATG ATTATGTCAA ATCTTCTCAT
GGATGTAATC TCTGTCCACC AAACATGTGC AAGGGATTGG TGATGGAAAG GATCCAAAAT TCTGTTGATG CTGCATCAGA
GCAGAAGTAC ATTTACCTCG GAGATGGAAA TGGAGACTTC TGCCCTAGTT TGAAGCTGAA AGACAAGGAC TTTTTGATGC
CCAGAAGGAA TTTTCCGTTG TATGATTTAG TGTCCAAAAA CTCTAATCAC GTAAAAGCAG AGGTGCATGC ATGGAGAAAT
GGGGAAGAGC TTCATGATGT TATGCTCCAT ATTATCAAGA ACGCAATCGG TGAAGGAAAG AGCAGTGTTA GTAGTTGTAC
TCCAACAAGA TCAATCGATT GCAAGTTAGG GTCAATTTCG ATTGATGTTC ATAACCCTTT ACCTACAGCA CTTCCAGTTC
CTCAATAACT ACCGATTAGG ATCGATCAAT CTCAGAATTA TTATGTTTCT TCTGTCTTGT CATCTCTGTG TTCCTACTTT
ATTTTGCTGT CGCTTCTCTG CTTTTGCAGA AAGTGTATCA GCCTTTAGCC TCCTATTATT ACTGATAATA AGACAATGAA
TAAAGTCTAT ATCTAGTTAT AATTAAACAC TGTTTGTAAT ATATGCA

>Vigan.07G031000.01
ATGGCTGGGA TTGTGGTGGT TTTTGACTTC GACTCAACAA TCATCGAATG CGATAGTGAT AACTGGGTTC TTGATGAGTT
TGGTCTAACC GAAAAGTTCT ATGAGTTTCT TCCTAACACG CTTTGGAACC CTCTCATGGA TAAGATGATG TACGAACTTC
ATTCACAAGG AAAAACCATT GAAGACATTG TACAAGTTCT GAATAGGACT CCAATGCATC CCCGCATTGT CCCAGCCATA
GAAGCAGCGT ATTCCCTTGG GTGCGAGTTG AAGATTGTGA GCGATGCAAA TAGTTTCTTT ATTGAAACAA TTTTGAAGCA
TCATGGGGTT TGGAATTGTT TCTCGGAGAT CACTGCAAAC CCCAGCTATG TTAATGAAGA AGGGATTCTC AGAGTTTGCC
CCTACCATGA TTATGTCAAA TCTTCTCATG GATGTAATCT CTGTCCACCA AACATGTGCA AGGGATTGGT GATGGAAAGG
ATCCAAAATT CTGTTGATGC TGCATCAGAG CAGAAGTACA TTTACCTCGG AGATGGAAAT GGAGACTTCT GCCCTAGTTT
GAAGCTGAAA GACAAGGACT TTTTGATGCC CAGAAGGAAT TTTCCGTTGT ATGATTTAGT GTCCAAAAAC TCTAATCACG
TAAAAGCAGA GGTGCATGCA TGGAGAAATG GGGAAGAGCT TCATGATGTT ATGCTCCATA TTATCAAGAA CGCAATCGGT
GAAGGAAAGA GCAGTGTTAG TAGTTGTACT CCAACAAGAT CAATCGATTG CAAGTTAGGG TCAATTTCGA TTGATGTTCA
TAACCCTTTA CCTACAGCAC TTCCAGTTCC TCAATAA

>Vigan.07G031000.01
MAGIVVVFDF DSTIIECDSD NWVLDEFGLT EKFYEFLPNT LWNPLMDKMM YELHSQGKTI EDIVQVLNRT PMHPRIVPAI
EAAYSLGCEL KIVSDANSFF IETILKHHGV WNCFSEITAN PSYVNEEGIL RVCPYHDYVK SSHGCNLCPP NMCKGLVMER
IQNSVDAASE QKYIYLGDGN GDFCPSLKLK DKDFLMPRRN FPLYDLVSKN SNHVKAEVHA WRNGEELHDV MLHIIKNAIG
EGKSSVSSCT PTRSIDCKLG SISIDVHNPL PTALPVPQ*