GBrowse Details

Vigan.07G086700.01

Basic Information:
Name: Vigan.07G086700.01
Multiple alignment
Variant Information
Position: Chr07:7311663..7313473 (- strand)
Length: 1811
Functional Information:
Description: Similar to Uncharacterized protein. [I1LU79, Glycine max]
GO: Biological Process: regulation of cyclin-dependent protein serine/threonine kinase activity (GO:0000079)
Molecular Function: protein kinase binding (GO:0019901)
InterPro: Cyclin P/U (IPR012389)
Cyclin-like (IPR013763)
Cyclin PHO80-like (IPR013922)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:1.02,1.00,11.44,35.81,0.11,1.30,0.08,1.67
Arabidopsis thaliana homolog: AT3G21870.1
Automatic updates:
Name: NM_001248519 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max cyclin-U1-1-like (LOC100527137), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr07:7311663..7312001 (- strand)
Length: 339
Type: three_prime_UTR
Position: Chr07:7312002..7312278 (- strand)
Length: 277
Type: CDS
Position: Chr07:7312635..7313059 (- strand)
Length: 425
Type: CDS
Position: Chr07:7313060..7313473 (- strand)
Length: 414
Type: five_prime_UTR


>Vigan.07G086700.01
TATGCTTCTA AAAGTTCCTG CAAAGGGGCC TAGTATTTTG CAGTGTACGA AGATAGACCT CCAGTTTTGT TTTCACACGA
ACCAAGCGAG TAAAGTTTAT GTTGCCAGGC TGTATTCTCG TGCATGGCTT GTTTTTATCC TCTGACAGCC CAAGGGTGGG
GTGGGGTCCC TCGATAAAGA ATATTAGTGG CTCGAGATTT ACAAGGTAAA GGATGCTAAA CTTTCAATCG CAATCCTAAT
ATTTGGTTTG TGGTAGAGCC ACACACGTCA GGTATACAGT CTGACTGGTT TCCCCTAATT GGATAACGAA CAGGTTTGCA
ACTAACGCCC CCTTAAGTCT TTAACCACTC AAATAGTAGC CATGGGCATC TGTAATATAA GAACCTCTGG TGAAACCACC
AAGAGATGGC CTAAATGTTA ACAGCAGGTG AATACAGCAG CAACCACGGT CGGCAGCTGC TGCCGGAAAC AAGCTTGTCC
GAGCTGAACT TGCCCAGAGT TCTCTTTGTC CTGTCTTCCA TGTTAGAGAA GCTGGTAGCT CGGAATGAAA AGCTTGTGGA
TGTCCTGAAC CAGCAGCTAG ATGGTCTGAC CTGTGGCTCA GTAAGACTTG GTAACAGCTT GAATACTTTT CATGGCGTAA
GAGCACCAAG CATAAGCATA CCTAAGTACT TGGAGAGGAT ATACAAGTAC ACTAACTGTA GCCCCTCCTG TTTTGTGGTT
GGCTATGTGT ACATAGACAG GCTCACACAT AGACACCCCG ATTCCCTTGT CACATCCTTG AATGTACACA GGCTGCTAGT
TACCAGTGTC ATGGTCGCTT CCAAGATGCT GGATGATGAA CATTACAACA ACGCCGTTTA TGCTCGAGTG GGAGGAGTGA
GCAATGCTGA ATTGAACAAG CTTGAGTTAG AGCTACTGTT TCTGTTGGAT TTTAGAGTTG TTGTAAGCTC TGGTGTATTT
GAGAGCTACT GCTTTCACTT AGAAAAAGAG ATGGCTGTGA ATGGCACAGG TATGAAGATT GAAAGGGCAT TGACACCAAA
GGCTATGGAA GACCTTGAGG CTGAAATATC CGTTGAAGAT AAACAAAGCC CTTCCCCACC TCAAATTGTA CACTGACATC
ATCGCTCGTT GTTTCTGGTC AATTTTGGGT CCCATACCCT TCTTTGTCCT TCCCTTCATC TTCACACCCT CCCACTAATT
GGATCATTCA TGGCCCAATT TCGTTTTTTT CTATCTCATG TCCATGTCAA AGCTTCTCGT ACCTTTTGCC TCCTGCAAAA
GAAAAAATAA CAGTACCATA TCAGTCATAC CAACTGTATC AATTTGGCTT TCACCACAAA ATACAGTTAT CTTACTTTTT
CTCTCTTTTT CATTTCTAAA GAAAGCTTGT TCTTCTTCAT AGAGAAATGT TAGCATAAGA TTCTTAATTA AAATTTATGA
ATTCCTTAAT GGAAA

>Vigan.07G086700.01
ATGTTAACAG CAGGTGAATA CAGCAGCAAC CACGGTCGGC AGCTGCTGCC GGAAACAAGC TTGTCCGAGC TGAACTTGCC
CAGAGTTCTC TTTGTCCTGT CTTCCATGTT AGAGAAGCTG GTAGCTCGGA ATGAAAAGCT TGTGGATGTC CTGAACCAGC
AGCTAGATGG TCTGACCTGT GGCTCAGTAA GACTTGGTAA CAGCTTGAAT ACTTTTCATG GCGTAAGAGC ACCAAGCATA
AGCATACCTA AGTACTTGGA GAGGATATAC AAGTACACTA ACTGTAGCCC CTCCTGTTTT GTGGTTGGCT ATGTGTACAT
AGACAGGCTC ACACATAGAC ACCCCGATTC CCTTGTCACA TCCTTGAATG TACACAGGCT GCTAGTTACC AGTGTCATGG
TCGCTTCCAA GATGCTGGAT GATGAACATT ACAACAACGC CGTTTATGCT CGAGTGGGAG GAGTGAGCAA TGCTGAATTG
AACAAGCTTG AGTTAGAGCT ACTGTTTCTG TTGGATTTTA GAGTTGTTGT AAGCTCTGGT GTATTTGAGA GCTACTGCTT
TCACTTAGAA AAAGAGATGG CTGTGAATGG CACAGGTATG AAGATTGAAA GGGCATTGAC ACCAAAGGCT ATGGAAGACC
TTGAGGCTGA AATATCCGTT GAAGATAAAC AAAGCCCTTC CCCACCTCAA ATTGTACACT GA

>Vigan.07G086700.01
MLTAGEYSSN HGRQLLPETS LSELNLPRVL FVLSSMLEKL VARNEKLVDV LNQQLDGLTC GSVRLGNSLN TFHGVRAPSI
SIPKYLERIY KYTNCSPSCF VVGYVYIDRL THRHPDSLVT SLNVHRLLVT SVMVASKMLD DEHYNNAVYA RVGGVSNAEL
NKLELELLFL LDFRVVVSSG VFESYCFHLE KEMAVNGTGM KIERALTPKA MEDLEAEISV EDKQSPSPPQ IVH*