GBrowse Details

Vigan.07G105300.01

Basic Information:
Name: Vigan.07G105300.01
Multiple alignment
Variant Information
Position: Chr07:9348170..9352857 (- strand)
Length: 4688
Functional Information:
Description: Similar to 14-3-3 protein-like protein. [T2DMV9, Phaseolus vulgaris]
GO: Molecular Function: protein domain specific binding (GO:0019904)
InterPro: 14-3-3 protein (IPR000308)
14-3-3 protein, conserved site (IPR023409)
14-3-3 domain (IPR023410)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:49.77,40.43,127.22,155.47,84.53,246.48,175.35,137.70
Arabidopsis thaliana homolog: AT2G42590.3
Automatic updates:
Name: NM_001250136 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max SGF14D (GF14D), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr07:9348170..9349591 (- strand)
Length: 1422
Type: three_prime_UTR
Position: Chr07:9349592..9349594 (- strand)
Length: 3
Type: CDS
Position: Chr07:9349680..9349735 (- strand)
Length: 56
Type: CDS
Position: Chr07:9350143..9350291 (- strand)
Length: 149
Type: CDS
Position: Chr07:9350387..9350496 (- strand)
Length: 110
Type: CDS
Position: Chr07:9351608..9351695 (- strand)
Length: 88
Type: CDS
Position: Chr07:9351796..9352102 (- strand)
Length: 307
Type: CDS
Position: Chr07:9352568..9352640 (- strand)
Length: 73
Type: CDS
Position: Chr07:9352641..9352857 (- strand)
Length: 217
Type: five_prime_UTR


>Vigan.07G105300.01
TTAGTTTCCG CACTCACACA CCTTATCGTG CTCCAGAGTT ACCGTGAGGA CCAAAAAGGA AAAATAAAGA AAAGGAAGGG
ACACATTTGA CATTTCAGGA CGGTGTTCTT TTCTACAGAA CCTCTGCCAG GAAGAATCGC AGAGAGAGGG TCAGAGTGAG
AAATAGAGTG AGAAGCAGCG AGAGTGTTAC CAAACCCTAA TTTCCAAGAG ATCGGCCATG GCTTCCTCCA AGGATCGTGA
CAACTTCGTC TACATCGCCA AGCTCGCGGA ACAGGCTGAA CGATACGAAG AGATGGTGGA TTCGATGAAG AAGGTTGCGA
ATCTAGACGT TGAACTGACT GTTGAGGAGC GAAATTTGCT TTCTGTTGGA TACAAGAATG TGATTGGTGC TCGGAGGGCG
TCATGGAGGA TCCTGTCTTC CATAGAGCAG AAGGAAGAGA CAAAAGGGAA TGAATTGAAT GCGAAGCGAA TTAAGGAGTA
CAGACAGAAG GTTGAATTGG AGCTTTCGAA CATCTGTAAT GATGTTATGA GGGTGATTGA TGAACATCTT ATTCCTTCGG
CTGCAGCTGG TGAATCCACT GTGTTTTACT ATAAGATGAA AGGAGATTAC TATCGTTATC TTGCTGAATT TAAGACCGGC
AATGAGAAGA AGGAAGCTGC TGATCAGTCT ATGAAAGCAT ATGAGTCTGC TACTACTGCA GCCGAGTCTG ATTTACCACC
CACACACCCC ATCCGATTGG GTCTAGCTTT AAATTTCTCA GTCTTCTATT ATGAAATCTT GAATTCCCCA GAAAGAGCTT
GTCATCTTGC AAAGCAAGCT TTTGATGAAG CTATTTCTGA GCTGGACACC CTGAACGAGG AGTCATACAA AGATAGCACC
TTAATCATGC AACTTCTCAG AGACAATCTA ACTTTGTGGA CTTCTGACAT CCCTGAGGAT GGAGAAGATG CGCAAAAAGT
GAATGGCACT GCCAAACTTG GTGGAGGTGA GGATGCAGAG TGAATTCGAT GGTTGATGGG AACTTCCCGT AGGATTTGAT
GCATGCATTT GGGAATGAAA CATGAGGGCC GATTACTTAT CTGTGTATTA GTTAGAGATA GGGTTTCATT GTTTCCTCTT
TGTTTCTTGT TGATTGGCCA TACTTCCCGA TAGGGGAAAA AGAAACTCCA TTTGTGCTAT TTATGCTATG TTTTTGTTTG
TGTGGTGTCT GGAAATGGCC TATTTCATTC CTAAGCCTTT TCCTCCCTTC TCTGGGGGAT TTGATTGATG AGAATTGATT
ATGGTGTATT ATTTTCTTTT CCAATGACTG CTACTACCCT TACTGCGATT TTGGAGATGA GTCTTCCATG GTTGTTTAAT
TTTTTCACTT TCATTGCATT CCTATTGTAT TGCCGCAAAA TGTGGAACAT ATAAATAAAC GTCCGAGAGA AGAAGTGACG
TCTGAGCACT TTTCCATCAG CAAAATACGC ATTTGTTTCT GAAGTCAGGA AAATAGCCTT TACTCCAGTC TTCTGTACTA
CAATATGAAC CATATACATA TATATTCTGT TTTTGTGATC AGAATAGGTT ATTATCGGGA CATACTCTGC CTTTGGATTC
CTTATTTTAG CTTCTCTAAA AATAAGTCGG GTGAAATACA TATTTTGAAA GGTTATTAGA AATAAAGAGA TTCAGCTAAA
AGAAACGAAA AAAGTGATTT GAAAATGAAA TGCTATTTTA GGAAAAAAGG TTAATTATGT TTTCTTTCCT ATTCTTGTAA
AAAAAAAATA GGTTATTTGA TTTTTGTGTT TTAATTTGAT TTTTTATTTA AAAAAATTGA TGCTTTTTAT GTAACACTTT
AATTACGTGG TGCTGTGAAG TTGAAATAAG TTTTTTTTTA CAGAGAAAAG GAGAATATTT GAACCGAGAG GGTTTCAACT
TCATCTTCTT TCCTCTTTAC ACAAGTCACC CATGAAGTAG TAGAGTTAGG TGTTGCTCAT CATTGAAGGC ACCAGTCGTT
GTCGACGACT GAAGATTGCT ATCGGAGCCT TGTCGGCGCC ATCCATCACT CTGGTGTTAT TAAAAAATGC TATGGTATCT
CCTTCCCCCT CCATCTTTGG CCACTCGAGT CATCTCTGGT AACGACAATG GCCACCGGAG CCCTCGCTGA CGACAGTGGC
GACCAAGATC GACAACAGCA TCAACCCAGA TCTAGCAGTT GCGCTCCTTC TACCTCAACT TCCTGCTTCA CTACTTTCTG
CTATCATATA CAACGGATTT CATCATATGT TTGGTTTCCC CAACCATCTT GCTAAATCTG TTGCATCTCT TCAGGTCTCA
TTCCCTATCA AAAAGAGTCA ATCATAGAGA CGTCTACTGC ACTGAATTTG AAAAACAAAG TATACGTAAT CGTTACACAT
TTCCACTTCA TCATGTCCAA AAGCT

>Vigan.07G105300.01
ATGGCTTCCT CCAAGGATCG TGACAACTTC GTCTACATCG CCAAGCTCGC GGAACAGGCT GAACGATACG AAGAGATGGT
GGATTCGATG AAGAAGGTTG CGAATCTAGA CGTTGAACTG ACTGTTGAGG AGCGAAATTT GCTTTCTGTT GGATACAAGA
ATGTGATTGG TGCTCGGAGG GCGTCATGGA GGATCCTGTC TTCCATAGAG CAGAAGGAAG AGACAAAAGG GAATGAATTG
AATGCGAAGC GAATTAAGGA GTACAGACAG AAGGTTGAAT TGGAGCTTTC GAACATCTGT AATGATGTTA TGAGGGTGAT
TGATGAACAT CTTATTCCTT CGGCTGCAGC TGGTGAATCC ACTGTGTTTT ACTATAAGAT GAAAGGAGAT TACTATCGTT
ATCTTGCTGA ATTTAAGACC GGCAATGAGA AGAAGGAAGC TGCTGATCAG TCTATGAAAG CATATGAGTC TGCTACTACT
GCAGCCGAGT CTGATTTACC ACCCACACAC CCCATCCGAT TGGGTCTAGC TTTAAATTTC TCAGTCTTCT ATTATGAAAT
CTTGAATTCC CCAGAAAGAG CTTGTCATCT TGCAAAGCAA GCTTTTGATG AAGCTATTTC TGAGCTGGAC ACCCTGAACG
AGGAGTCATA CAAAGATAGC ACCTTAATCA TGCAACTTCT CAGAGACAAT CTAACTTTGT GGACTTCTGA CATCCCTGAG
GATGGAGAAG ATGCGCAAAA AGTGAATGGC ACTGCCAAAC TTGGTGGAGG TGAGGATGCA GAGTGA

>Vigan.07G105300.01
MASSKDRDNF VYIAKLAEQA ERYEEMVDSM KKVANLDVEL TVEERNLLSV GYKNVIGARR ASWRILSSIE QKEETKGNEL
NAKRIKEYRQ KVELELSNIC NDVMRVIDEH LIPSAAAGES TVFYYKMKGD YYRYLAEFKT GNEKKEAADQ SMKAYESATT
AAESDLPPTH PIRLGLALNF SVFYYEILNS PERACHLAKQ AFDEAISELD TLNEESYKDS TLIMQLLRDN LTLWTSDIPE
DGEDAQKVNG TAKLGGGEDA E*