GBrowse Details

Vigan.07G115000.01

Basic Information:
Name: Vigan.07G115000.01
Multiple alignment
Variant Information
Position: Chr07:10677865..10681736 (- strand)
Length: 3872
Functional Information:
Description: Similar to Uncharacterized protein. [I1M3G7, Glycine max]
GO: Biological Process: protein phosphorylation (GO:0006468)
Molecular Function: protein kinase activity (GO:0004672)
Molecular Function: protein serine/threonine kinase activity (GO:0004674)
Molecular Function: ATP binding (GO:0005524)
Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772)
InterPro: Protein kinase domain (IPR000719)
Serine-threonine/tyrosine-protein kinase catalytic domain (IPR001245)
Serine/threonine- / dual specificity protein kinase, catalytic domain (IPR002290)
Serine/threonine-protein kinase, active site (IPR008271)
Protein kinase-like domain (IPR011009)
Concanavalin A-like lectin/glucanase, subgroup (IPR013320)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.55,1.70,6.09,3.20,11.58,3.21,20.89,6.07
Arabidopsis thaliana homolog: AT5G54590.2
Automatic updates:
Name: NM_001254371 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max probable leucine-rich repeat receptor-like serine/threonine-protein kinase At5g15730-like (LOC100817345), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr07:10677865..10678146 (- strand)
Length: 282
Type: three_prime_UTR
Position: Chr07:10678147..10678491 (- strand)
Length: 345
Type: CDS
Position: Chr07:10678620..10678820 (- strand)
Length: 201
Type: CDS
Position: Chr07:10678907..10678978 (- strand)
Length: 72
Type: CDS
Position: Chr07:10679062..10679147 (- strand)
Length: 86
Type: CDS
Position: Chr07:10679254..10679380 (- strand)
Length: 127
Type: CDS
Position: Chr07:10679654..10679807 (- strand)
Length: 154
Type: CDS
Position: Chr07:10680256..10680572 (- strand)
Length: 317
Type: CDS
Position: Chr07:10680573..10681736 (- strand)
Length: 1164
Type: five_prime_UTR


>Vigan.07G115000.01
CTTCGCCGTT TTCCGGTTTC TCTCTCTCTC TGTCGTTTGT TTATGCACTT TTTATTTTGT TGTCCGGAAA CCGTGTCTGC
GACTCTCTTA CACATAACAC ATTCTTTTCT CTCGTTTTTG TTTTTGGAAT CTCGTTCAGG ATCTTCTACC CTTTTTTCAT
TCCTTCTCGC TTCTGGGTTT CTCTTTCTGT CTTTAGCAAC GCTCCCACCA AAAAACGTAA CTAACTGCTT TGCTTTCAGT
TCAGTTTTTC CTAGTGTGTG AATTGGTGAG TGGAGGCGTC ATATTTTCCC CAGAACATGT TTCCGTTTCC TTTCTGTCTA
CCTTTTTTGC TGTCAGTGTT TTGATCTGTC ATCTTATGTT TCTTCAAAGT GTGTTTTATG TCTCAAAGTG CCTGCTTAAC
TGGATATATG CATGTTTTTT TTTTTTTTAA TTTTCGTGTT TATTTTGTTG CTGCTAAAGG GTGGGGAAAA AACGGAAGCT
TTGTGGGGTG AATGAAAGAA GAGTAAAAAT GAAAAGGGTG TTGTCATTTG GTTACATGCT TATGTGAATC TGAGTTGAGA
TTTCAATGAT GGTTTGAAAC TTTTTGCTTG ATTTTGATTT TGCTCTCATT TTCCTGATTT TTGTTCCTTG TTAGATTGAA
TGGATAGAAA AAAAGTTGAT AAAGTTTCAG GATTTATGCA TTTCAGATTG GTATAGAGGA GAGGATTAGG ATTAGGATTA
GGATTCTTTC TATTTGGGTC TTTGATGCAA TTCTTGTTCC GTGTGCTAGT GGTTTTGGTA AAGTCTAGTT TTGAACAGAC
GTAATGGGTG GTAACTGGTG AAGTTGTTGG TGATAAGTTA TGCTTGATCG ATTGTTTCAA TATTATGCTG ATGTCATTGT
CCAACTTCCA GCATTGATTA TTCATGCTGA GATTTTATTT TCTTCTTCTG AGTGTTATAA ACTTCCGAAG ACTTTTTGAC
AATGACTTTG AAAATTAAGA GTAAAAGCCT TCAATTGACT GGTTCAAGTT CAATGTTGTA AACCAGGCAC CAAGGAAATC
TGTATATTAG TCTATTACTG GTGGCATATA ATTGACCATG TTTTGTTGCT TGCTATGGCA GGTATATCAA TGGATTGGAT
GATCAATAAT AGGAAAGTCT AGCGCAGAAG AGGAAAGGGG AGAGATGAAA GACGAGTCAA CTGGGCTTAT CATCGGGATT
TCCATAGGTG TGGTGATTGG AGTTGCTTTG GCAATTTCTG CGTTGTTCTG TCTCAGATAT CATAGGAAAC GGTCACAGAT
AGGCAATAGC AGTTCCCGGA GAGCAGCTGC CATACCCATC CGCCAAAATG GTTTTGATTC ATGCACTATT CTATCAGACT
CAACCTTGGG TCCAGAATCA CCTGTGAGGT CTGGACGAAA TGGCACATCC TTCTGGCTTG AGGGCTTCAA GAAGAGTAGC
AACATGGTGT CAGCATCTGG AATACCAGAA TATTCATACA AGGATTTGCA AAAGGCAACA TATAATTTTA CAACACTCAT
AGGACAAGGT GCATTTGGTC CTGTTTATAA AGCACAGATG TCTACTGGGG AGACTGTTGC AGTTAAAGTT CTCGCTACTA
ATTCTAAGCA AGGGGAGAAA GAATTTCATA CAGAGGTTAT GCTGTTGGGA AGGTTACATC ATAGGAATCT GGTGAATTTG
GTTGGGTATT GTGCGGAAAA GGGGCAACAC ATGCTTATAT ATGTGTACAT GAGTAAAGGC TGCTTGGCTT CCCACTTGTA
CAGTGAAGAG AATGGTGCTC TGGGTTGGGA ATTGAGAGTT CATATAGCTT TAGACGTAGC AAGAGGAATA GAGTATCTTC
ATGATGGGGC AGTTCCTCCT GTAATCCATC GAGATATCAA ATCTTCCAAT ATTCTCTTGG ACCAGTCCAT GCGAGCCAGG
GTTGCTGATT TTGGACTCTC GAGAGAAGAG ATGGTGGATA AACAAGCTGC AATTCGGGGT ACCTTTGGCT ATCTTGATCC
TGAGTATATA TCTTCAGGAA CATTCACCAA AAAAAGTGAT GTATACAGTT TTGGGGTTTT GCTCTTTGAA CTTATAGCAG
GCAGAAATCC TCAGCAAGGT CTAATGGAAT ATGTTGAGCT TGCAGCAATG AACAGTGAGG GGAAAGTTGG TTGGGAGGAG
ATAGTTGATT CTAGGCTTGA GGGAAAATGT GAATTTGAAG AGGTGAATGA AGTGGCAGCC CTTGCCTACA AATGCATCAA
CCGTGTTCCA AAGAAACGGC CTTCCATGAG GGACATTGTG CAAGTTTTGA CACGAATACT CAAGTCAAGG CACCAAAGGA
ATCATCATCA TCACAAGAAG TCACTCTCAG CCGCAGGTGA TGAAGTTTCC ATTGATGTTG ATCAGCTAGA AACCAAGACT
TCTCTCACTC ACCACCACAC AAGAGAAGAA TCTATAGACA GCGCAGCTGA CATGTATGAT TTGTAGAAGA TGGTTTTGCA
TTTAGCTCAG TTTTTTCATT AACATTGAAT TTTTTGTATT TGCCTTTGGA TGTCATTTGG CCATAACTTT ATCGAGGCAC
CAGTGATTTG ATGACGCCAG ACATCATCTT CTGTAATTGT CATAACATTT TTTTTGGTTT CTGTTTCTTT TTTTTTTTTC
TCTTACCTCA GTTCTGTCTC ACAGAAATTA CACTCAAAAT TTGTATAGTA ACACTTCGAA GAATGAATTT GAAGCAACAA
AAGGAAAAGT TACCTGTCTT GCCCTGAA

>Vigan.07G115000.01
ATGAAAGACG AGTCAACTGG GCTTATCATC GGGATTTCCA TAGGTGTGGT GATTGGAGTT GCTTTGGCAA TTTCTGCGTT
GTTCTGTCTC AGATATCATA GGAAACGGTC ACAGATAGGC AATAGCAGTT CCCGGAGAGC AGCTGCCATA CCCATCCGCC
AAAATGGTTT TGATTCATGC ACTATTCTAT CAGACTCAAC CTTGGGTCCA GAATCACCTG TGAGGTCTGG ACGAAATGGC
ACATCCTTCT GGCTTGAGGG CTTCAAGAAG AGTAGCAACA TGGTGTCAGC ATCTGGAATA CCAGAATATT CATACAAGGA
TTTGCAAAAG GCAACATATA ATTTTACAAC ACTCATAGGA CAAGGTGCAT TTGGTCCTGT TTATAAAGCA CAGATGTCTA
CTGGGGAGAC TGTTGCAGTT AAAGTTCTCG CTACTAATTC TAAGCAAGGG GAGAAAGAAT TTCATACAGA GGTTATGCTG
TTGGGAAGGT TACATCATAG GAATCTGGTG AATTTGGTTG GGTATTGTGC GGAAAAGGGG CAACACATGC TTATATATGT
GTACATGAGT AAAGGCTGCT TGGCTTCCCA CTTGTACAGT GAAGAGAATG GTGCTCTGGG TTGGGAATTG AGAGTTCATA
TAGCTTTAGA CGTAGCAAGA GGAATAGAGT ATCTTCATGA TGGGGCAGTT CCTCCTGTAA TCCATCGAGA TATCAAATCT
TCCAATATTC TCTTGGACCA GTCCATGCGA GCCAGGGTTG CTGATTTTGG ACTCTCGAGA GAAGAGATGG TGGATAAACA
AGCTGCAATT CGGGGTACCT TTGGCTATCT TGATCCTGAG TATATATCTT CAGGAACATT CACCAAAAAA AGTGATGTAT
ACAGTTTTGG GGTTTTGCTC TTTGAACTTA TAGCAGGCAG AAATCCTCAG CAAGGTCTAA TGGAATATGT TGAGCTTGCA
GCAATGAACA GTGAGGGGAA AGTTGGTTGG GAGGAGATAG TTGATTCTAG GCTTGAGGGA AAATGTGAAT TTGAAGAGGT
GAATGAAGTG GCAGCCCTTG CCTACAAATG CATCAACCGT GTTCCAAAGA AACGGCCTTC CATGAGGGAC ATTGTGCAAG
TTTTGACACG AATACTCAAG TCAAGGCACC AAAGGAATCA TCATCATCAC AAGAAGTCAC TCTCAGCCGC AGGTGATGAA
GTTTCCATTG ATGTTGATCA GCTAGAAACC AAGACTTCTC TCACTCACCA CCACACAAGA GAAGAATCTA TAGACAGCGC
AGCTGACATG TATGATTTGT AG

>Vigan.07G115000.01
MKDESTGLII GISIGVVIGV ALAISALFCL RYHRKRSQIG NSSSRRAAAI PIRQNGFDSC TILSDSTLGP ESPVRSGRNG
TSFWLEGFKK SSNMVSASGI PEYSYKDLQK ATYNFTTLIG QGAFGPVYKA QMSTGETVAV KVLATNSKQG EKEFHTEVML
LGRLHHRNLV NLVGYCAEKG QHMLIYVYMS KGCLASHLYS EENGALGWEL RVHIALDVAR GIEYLHDGAV PPVIHRDIKS
SNILLDQSMR ARVADFGLSR EEMVDKQAAI RGTFGYLDPE YISSGTFTKK SDVYSFGVLL FELIAGRNPQ QGLMEYVELA
AMNSEGKVGW EEIVDSRLEG KCEFEEVNEV AALAYKCINR VPKKRPSMRD IVQVLTRILK SRHQRNHHHH KKSLSAAGDE
VSIDVDQLET KTSLTHHHTR EESIDSAADM YDL*