GBrowse Details

Vigan.07G128400.01

Basic Information:
Name: Vigan.07G128400.01
Multiple alignment
Variant Information
Position: Chr07:12962198..12964251 (- strand)
Length: 2054
Functional Information:
Description: Similar to Uncharacterized protein. [I1M3B1, Glycine max]
InterPro: Domain of unknown function DUF3700 (IPR024286)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:32.48,24.75,27.69,102.63,128.71,44.65,87.32,28.94
Arabidopsis thaliana homolog: AT4G27450.1
Automatic updates:
Name: NM_001248274 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC547601 (LOC547601), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr07:12962198..12962719 (- strand)
Length: 522
Type: three_prime_UTR
Position: Chr07:12962720..12962910 (- strand)
Length: 191
Type: CDS
Position: Chr07:12963111..12963231 (- strand)
Length: 121
Type: CDS
Position: Chr07:12963328..12963568 (- strand)
Length: 241
Type: CDS
Position: Chr07:12963792..12964003 (- strand)
Length: 212
Type: CDS
Position: Chr07:12964004..12964251 (- strand)
Length: 248
Type: five_prime_UTR


>Vigan.07G128400.01
CCAATCTAGA TCCTCTCCCA CTATGAGATG ATGCAATCTT AGCCTTTGAT TAATTATTAT TTAATATGGA AAATTTTAAA
ACATATGTAT TCAATGGTGA GATTTTAAAA CTGCATACTG TCCAAATTTT TTCAACTTGA AGTGGGGCTA TAAATACGAC
AATGGTCCTT CCTCAGAATC CTGCTTTTCC TTTTTCAATT TTAATATTTC TTTGTAGTGA GGCTTGAGAT TCCTGTTGCT
GAATCAAAAT GTTGGCCATT TTCCACAAAG CTTTTGCTCA TCCCCCTGAA GAGTTGAACA GTCCTGCTTC TTACAAAGGC
TCCAAGAAGC CTAAGGTTCC TGAAGAGACT CTCAAATATT TCCTTGCTCA CCATCCTCCG AACACTTGCT CTATGAGCTT
TGGCCATGCT GCTGTGCTAG CTTATGTCCG TCCTGATCAA CCTTTCTCTC GTAATCAAAG GTTGTTTTGT GGGATTGATG
ACATATACTG TATCTTCTTG GGGAGTTTGA ACAATTTGTC TCTACTGATC AAGCAATATG GCTTGTCAAA GAACACTGAT
GAGGCCATGC TTGTGATTGA AGCTTATAAG ACCCTCCGTG ACAGGGGTCC ATACCCGGCA GATCAAGTTG TCAAGGAACT
TGATGGCAGC TTTGCCTTTG TTGTGTATGA CAGCAAGGTT GGAAGTGTCT TTGCAGCACT GGGTTCTGAT GGGGGAGTGA
AGCTGTATTG GGGTCTTGCA GCTGATGGAT CTGTGGTGAT CTCTGATGAT CTAGAAGTCA TAAAAGAGGG CTGTGCCAAA
TCCTTTGCTC CCTTCCCAAC AGGGTGTATG TTTCACAGTG AAGGAGGCTT GATGAGCTTT GAGCATCCAA TGAACAAGTT
GAAGGCAATG CCAAGAGTTG ACAGTGAAGG GGCCATGTGT GGGGCCAATT TCAAAGTTGA TAAGTTCTCC AGAGTCAACA
GCATTCCTCG AGTGGGAAGT CAATCCAATT GGATGGAATG GGACCAACAT TAGCATAAAC AATCCTTATG GATAATAATG
TTTAATAAAA GTGTCATCTA TGGTCCAATT TACCCTTCTG AATCTGTTTT CTCTTCTTCT TGCTTGTGTT GTTTTCCTGT
TTCCTTCCGG CATGGTACAT ATTGAAGCGT TTTTTCAAAC ATGTTAAGTG CTGACCGTGG TGCTTGTGTT CTCACTCAGA
TTAACATGGT TCAGGTCAGG AACATCTGTG TCAGTGTTTT ATTGCATGAA GATGTGCCAA ATAGGTCCTA GGAATTGTAA
TGTAACATGG ATGATATGGT GTGCAAAATG GATGAACAAG GACAGACTAT AGTTACTGCA CTCCATTTCT CAATCTAAAG
TGCTTCAGCT AGTTCAATGC CAATTTATCA TTCATTTGAA AAACATAGCA TAATAGCTGC GTTTGTCTTG CTTCTAGATT
CCTATATGAA CTGAAAGAAT TTAATCAAAG TCTACCCAGA AAATTTGGGT ACATCAGAAT TTGAAAAAAA CTGTCATTAG
TGTAATATGA TTTAT

>Vigan.07G128400.01
ATGTTGGCCA TTTTCCACAA AGCTTTTGCT CATCCCCCTG AAGAGTTGAA CAGTCCTGCT TCTTACAAAG GCTCCAAGAA
GCCTAAGGTT CCTGAAGAGA CTCTCAAATA TTTCCTTGCT CACCATCCTC CGAACACTTG CTCTATGAGC TTTGGCCATG
CTGCTGTGCT AGCTTATGTC CGTCCTGATC AACCTTTCTC TCGTAATCAA AGGTTGTTTT GTGGGATTGA TGACATATAC
TGTATCTTCT TGGGGAGTTT GAACAATTTG TCTCTACTGA TCAAGCAATA TGGCTTGTCA AAGAACACTG ATGAGGCCAT
GCTTGTGATT GAAGCTTATA AGACCCTCCG TGACAGGGGT CCATACCCGG CAGATCAAGT TGTCAAGGAA CTTGATGGCA
GCTTTGCCTT TGTTGTGTAT GACAGCAAGG TTGGAAGTGT CTTTGCAGCA CTGGGTTCTG ATGGGGGAGT GAAGCTGTAT
TGGGGTCTTG CAGCTGATGG ATCTGTGGTG ATCTCTGATG ATCTAGAAGT CATAAAAGAG GGCTGTGCCA AATCCTTTGC
TCCCTTCCCA ACAGGGTGTA TGTTTCACAG TGAAGGAGGC TTGATGAGCT TTGAGCATCC AATGAACAAG TTGAAGGCAA
TGCCAAGAGT TGACAGTGAA GGGGCCATGT GTGGGGCCAA TTTCAAAGTT GATAAGTTCT CCAGAGTCAA CAGCATTCCT
CGAGTGGGAA GTCAATCCAA TTGGATGGAA TGGGACCAAC ATTAG

>Vigan.07G128400.01
MLAIFHKAFA HPPEELNSPA SYKGSKKPKV PEETLKYFLA HHPPNTCSMS FGHAAVLAYV RPDQPFSRNQ RLFCGIDDIY
CIFLGSLNNL SLLIKQYGLS KNTDEAMLVI EAYKTLRDRG PYPADQVVKE LDGSFAFVVY DSKVGSVFAA LGSDGGVKLY
WGLAADGSVV ISDDLEVIKE GCAKSFAPFP TGCMFHSEGG LMSFEHPMNK LKAMPRVDSE GAMCGANFKV DKFSRVNSIP
RVGSQSNWME WDQH*