GBrowse Details

Vigan.07G190600.01

Basic Information:
Name: Vigan.07G190600.01
Multiple alignment
Variant Information
Position: Chr07:26366901..26369089 (- strand)
Length: 2189
Functional Information:
Description: Similar to Uncharacterized protein. [I1KTJ7, Glycine max]
InterPro: Protein of unknown function DUF953, thioredoxin-like (IPR010357)
Thioredoxin-like fold (IPR012336)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.00,0.00,0.00,0.13,0.00,0.00,2.30,0.13
Arabidopsis thaliana homolog: AT5G42850.1
Automatic updates:
Name: NM_001252715 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max thioredoxin-like protein Clot-like (LOC100785157), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr07:26366901..26367637 (- strand)
Length: 737
Type: three_prime_UTR
Position: Chr07:26367638..26367888 (- strand)
Length: 251
Type: CDS
Position: Chr07:26368887..26369031 (- strand)
Length: 145
Type: CDS
Position: Chr07:26369032..26369089 (- strand)
Length: 58
Type: five_prime_UTR


>Vigan.07G190600.01
TGTGTTGGAA AATAATCTGA CAACTTTTTG GAGTTGTTTT GTTTGCAGAG AAGAAAAAAT GCCGTTGAAG TTGTTGGAGG
CAACAGTGTC GAGTTTTGAT GGTGTTTTTG AGAAGTTCCG ATCAGAGGCT GCAGAAAACA AGGCGAATCT CATCCTTTTC
TTGGCTGACA AAGACCCTGC TACCTCTCTC AGCTGGTGCC CTGATTGTGT GAGAGCAGAA CCTGTGATCT ACAAGAAGCT
GGAGGCGTCA TCTGATGACA TTGCACTTTT GAGAGCTTAT GTTGGAGATA GACCAACATG GAGGAACCCC AAGCATCCAT
GGAGAGTGGA ACCTAGGTTC AAGCTCACTG GGGTGCCAAC ATTGATCCGT TGGGACAATG ACACGGTCAA AGGTCGCCTA
GAAGATCACG AAGCTCATCT AGAAAACAAA ATTGAAACTC TTGTTGAAAA GTGACAAACG ATTCACGGTG CATGGTTTTA
GTTGGTACTG CATATAGTTT AAACAATGTG TGATGTACTC ATATCAGCAA TTTATCCCTC TCATACTTTA TAAACTTGCT
GCTAAAGCAT ATAATAAAAG GTGATAAGGG ATGGCTATAA ACGAGGGTAG GTTCTTTTAG CTTATTTTGT GGCTTTGAGC
ACTACAAATT TACTGGTTAG TCCAAGGTAA TGTTACCTAT AGTGTTTTTG CAGACTGAAA ATGCCAGTTA AACGAATTTT
GATTCAGAAT TCATACAGTT CGTAGTTCAT AACGCATAAT TGAGTGAAGT CCGTATGTTA GAGAGACAAC CGATACATAA
ATCTGCCTTT TCTTACTTTG TACAGAGGAC CTAAATATCA CTGTTTGACT GTTATACCGC TCTTTCTGTT TCAGCCTTCA
TTCATAATTA ACATATATTA CATGTCAAGG TATAAGAATC CTCACTTTTG TAAAAAGCCT GAAAAGCCTA ATTTTAAATG
CCATGCTTGT TGACAAAAAT TCAGACCAAA TTACAAGGTG GACAATTTCA ATCCTAAATT ACAAGGTGGG CAAAATTAAA
TAAAAATAAG TTAATGATTG CAGTTTAATA TAAACTAACC AGATACAGAT ATACATAGTG ACAAAAATCA TCTCCTCAAG
CTGGCCATTT CGCCTTATGT CTGCTATTAT ACATAACCGA CTGCGTTTCC ATTCTAGGCA AGAAATCCAA C

>Vigan.07G190600.01
ATGCCGTTGA AGTTGTTGGA GGCAACAGTG TCGAGTTTTG ATGGTGTTTT TGAGAAGTTC CGATCAGAGG CTGCAGAAAA
CAAGGCGAAT CTCATCCTTT TCTTGGCTGA CAAAGACCCT GCTACCTCTC TCAGCTGGTG CCCTGATTGT GTGAGAGCAG
AACCTGTGAT CTACAAGAAG CTGGAGGCGT CATCTGATGA CATTGCACTT TTGAGAGCTT ATGTTGGAGA TAGACCAACA
TGGAGGAACC CCAAGCATCC ATGGAGAGTG GAACCTAGGT TCAAGCTCAC TGGGGTGCCA ACATTGATCC GTTGGGACAA
TGACACGGTC AAAGGTCGCC TAGAAGATCA CGAAGCTCAT CTAGAAAACA AAATTGAAAC TCTTGTTGAA AAGTGA

>Vigan.07G190600.01
MPLKLLEATV SSFDGVFEKF RSEAAENKAN LILFLADKDP ATSLSWCPDC VRAEPVIYKK LEASSDDIAL LRAYVGDRPT
WRNPKHPWRV EPRFKLTGVP TLIRWDNDTV KGRLEDHEAH LENKIETLVE K*