GBrowse Details

Vigan.07G201600.01

Basic Information:
Name: Vigan.07G201600.01
Multiple alignment
Variant Information
Position: Chr07:27879927..27882095 (+ strand)
Length: 2169
Functional Information:
Description: Similar to Uncharacterized protein. [I1KTV4, Glycine max]
GO: Biological Process: response to oxidative stress (GO:0006979)
Biological Process: oxidation-reduction process (GO:0055114)
Molecular Function: peroxidase activity (GO:0004601)
Molecular Function: heme binding (GO:0020037)
InterPro: Plant peroxidase (IPR000823)
Haem peroxidase, plant/fungal/bacterial (IPR002016)
Haem peroxidase (IPR010255)
Peroxidases heam-ligand binding site (IPR019793)
Peroxidase, active site (IPR019794)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.00,0.00,0.14,0.00,0.00,0.00,0.90,0.00
Automatic updates:
Name: NM_001317646 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max peroxidase 7-like (LOC100792775), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr07:27879927..27879955 (+ strand)
Length: 29
Type: five_prime_UTR
Position: Chr07:27879956..27880210 (+ strand)
Length: 255
Type: CDS
Position: Chr07:27881236..27881985 (+ strand)
Length: 750
Type: CDS
Position: Chr07:27881986..27882095 (+ strand)
Length: 110
Type: three_prime_UTR


>Vigan.07G201600.01
CTCAATCTGG CATTGCAAAC TTTTGAAACA TGAGGCTCCA CTACTTCACC CTTTTCCTTC TCTTGGTCCC TTTGAAGTTG
AGCAGCATTT ATGGCATCTC TCCACAACCC AATAAATCAT TAAAGTCCTT ACCCCCTGAG GCCTTCCTCT CCATTGATCA
CTATCACACA ACATGTCCTG ATGCTGAAGG CATCATCTCA CAGAAGGTTG CTGCTTGGGT TAAGCAGGAC CCCACTTTGG
CCCCTGCCAT CATACGCCTT CATTTCCATG ACTGTGCTGT TAGAGGATGT GATGGATCAA TTTTGCTGAA CCATCTAGGG
AGTGAGAGGA CTGCTTTGGA GAGCAAAACC CTCAGAGGGT TCCAATTGAT TGATGATATC AAGGCTGAGT TGGAGAGGAA
GTGTCCAAAA ACAGTCTCTT GTGCTGATAT TCTCACTGCT GCTGCAAGAG ATGCCACTCT TTTGGTTGGA GGACCATTCT
GGGAAGTTCC ATTTGGCCGC AAAGATGGCA AGATTTCCTT ATCAACAGAA GCCAATTTGG TTCCCCATGG CCATGAAAAC
ATCACAGCTC TTATTGCATT CTTCCAAGAA AAGGGGTTAG ACATTCTTGA CTTGGTCACA CTCTCAGGTT CACACACAAT
TGGGAGGAGC ACTTGCTCTT CTGTTATGGA CAGGATTTAC AATTTCAATG GGACTCAAAA GCCTGACCCC TCAATCAACG
TGTATTTCTT GAAATTGTTG AGGAAGAGGT GTAAATCAGA GATGGATTTG GTGCACCTTG ATGTTATAAC CCCAAGAACT
TTTGACACAA TCTATTATAC AAACCTTATG AGGAAGGTGG GGTTGTTGTC AACAGATCAG TCTCTCTTTT CAGATGCAAG
GACAGCTCCT TTTGTTGAAG CATTTGCAAC ACAACCTTTC CTTTTCACTA GCCAGTTTTC AGTGTCAATG GTGAAACTTG
GGAATGTTCA AGTTTTGACT AGGCCTAATG AAGGTGAAAT AAGGGTTAAT TGTAATCGTG TCAATACTGT CTAACTTCTG
TCCTACTTAA TATGTGGTCT ATTTCATTGC TCCAATCTTA CATTTGGAAT GTCATAGAAG ACAATATATA CATGTCTCTA
CTTCTGTGTT GTATGAGAAA TTAC

>Vigan.07G201600.01
ATGAGGCTCC ACTACTTCAC CCTTTTCCTT CTCTTGGTCC CTTTGAAGTT GAGCAGCATT TATGGCATCT CTCCACAACC
CAATAAATCA TTAAAGTCCT TACCCCCTGA GGCCTTCCTC TCCATTGATC ACTATCACAC AACATGTCCT GATGCTGAAG
GCATCATCTC ACAGAAGGTT GCTGCTTGGG TTAAGCAGGA CCCCACTTTG GCCCCTGCCA TCATACGCCT TCATTTCCAT
GACTGTGCTG TTAGAGGATG TGATGGATCA ATTTTGCTGA ACCATCTAGG GAGTGAGAGG ACTGCTTTGG AGAGCAAAAC
CCTCAGAGGG TTCCAATTGA TTGATGATAT CAAGGCTGAG TTGGAGAGGA AGTGTCCAAA AACAGTCTCT TGTGCTGATA
TTCTCACTGC TGCTGCAAGA GATGCCACTC TTTTGGTTGG AGGACCATTC TGGGAAGTTC CATTTGGCCG CAAAGATGGC
AAGATTTCCT TATCAACAGA AGCCAATTTG GTTCCCCATG GCCATGAAAA CATCACAGCT CTTATTGCAT TCTTCCAAGA
AAAGGGGTTA GACATTCTTG ACTTGGTCAC ACTCTCAGGT TCACACACAA TTGGGAGGAG CACTTGCTCT TCTGTTATGG
ACAGGATTTA CAATTTCAAT GGGACTCAAA AGCCTGACCC CTCAATCAAC GTGTATTTCT TGAAATTGTT GAGGAAGAGG
TGTAAATCAG AGATGGATTT GGTGCACCTT GATGTTATAA CCCCAAGAAC TTTTGACACA ATCTATTATA CAAACCTTAT
GAGGAAGGTG GGGTTGTTGT CAACAGATCA GTCTCTCTTT TCAGATGCAA GGACAGCTCC TTTTGTTGAA GCATTTGCAA
CACAACCTTT CCTTTTCACT AGCCAGTTTT CAGTGTCAAT GGTGAAACTT GGGAATGTTC AAGTTTTGAC TAGGCCTAAT
GAAGGTGAAA TAAGGGTTAA TTGTAATCGT GTCAATACTG TCTAA

>Vigan.07G201600.01
MRLHYFTLFL LLVPLKLSSI YGISPQPNKS LKSLPPEAFL SIDHYHTTCP DAEGIISQKV AAWVKQDPTL APAIIRLHFH
DCAVRGCDGS ILLNHLGSER TALESKTLRG FQLIDDIKAE LERKCPKTVS CADILTAAAR DATLLVGGPF WEVPFGRKDG
KISLSTEANL VPHGHENITA LIAFFQEKGL DILDLVTLSG SHTIGRSTCS SVMDRIYNFN GTQKPDPSIN VYFLKLLRKR
CKSEMDLVHL DVITPRTFDT IYYTNLMRKV GLLSTDQSLF SDARTAPFVE AFATQPFLFT SQFSVSMVKL GNVQVLTRPN
EGEIRVNCNR VNTV*