GBrowse Details

Vigan.07G207500.01

Basic Information:
Name: Vigan.07G207500.01
Multiple alignment
Variant Information
Position: Chr07:28651707..28663888 (- strand)
Length: 12182
Functional Information:
Description: Similar to Uncharacterized protein. [K7L761, Glycine max]
GO: Biological Process: protein methylation (GO:0006479)
Biological Process: methylation (GO:0032259)
Molecular Function: nucleic acid binding (GO:0003676)
Molecular Function: methyltransferase activity (GO:0008168)
Molecular Function: protein methyltransferase activity (GO:0008276)
InterPro: DNA methylase, N-6 adenine-specific, conserved site (IPR002052)
Modification methylase HemK (IPR004556)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.49,1.01,3.26,5.73,2.04,3.48,2.98,3.60
Arabidopsis thaliana homolog: AT5G64150.1
Automatic updates:
Name: NM_001255389 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max protein methyltransferase hemK homolog (LOC100796269), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr07:28651707..28652133 (- strand)
Length: 427
Type: three_prime_UTR
Position: Chr07:28652134..28652262 (- strand)
Length: 129
Type: CDS
Position: Chr07:28662119..28662364 (- strand)
Length: 246
Type: CDS
Position: Chr07:28662953..28663663 (- strand)
Length: 711
Type: CDS
Position: Chr07:28663664..28663888 (- strand)
Length: 225
Type: five_prime_UTR


>Vigan.07G207500.01
TATCTCTTTC CGGGTCGCTA TTTACCTGTT ACATGCCTCA GTTCAGAGTA TTTTCTTCGT CTTTCAGTAA GTGAGCTAAA
CCGTTTCTTC GTCTTGAAAA ATATCTTGGA TTTTTCGTTA ACCCTTACTC AATTTTTACC TTTGTTAGGT TATGCAAATG
CTGAAGTTGA TGACCGATGA TGCCGTATAG TAACAAAAAA GTTTCTTCAT TTTCGTTCTC TTGAAATGAA GCTAACATTA
GGCATTGCAT ATTGTCCTCA TAGCTTCCCC AAACTCCTCA ATTGTTTTTC TTTTGGCTCT CTGGGTAGAC CCTTTTGCTC
TTCAGCACCG TCATCTTCCC CGACTTGTGT GAAACCTCAA GTTCCCCTCT ATTTGAGACC ACCCATTTAC TCAACCAAGT
TGTGTGACCT CAAGAAATGG CACGATTGGG CCAAAGGTCT TTCCTTTTCA ATTGGGTCGA CTTTTGTGCA GTCAGATAAT
GGACCGGACT CAAGCATGCT CTGCAGGGAG CTCAAGTGGT TCATGGAGGA TGCTGTTGAA GACCGCTCAC TAGCTACGGA
GGATGATGAA GAGGTGACAA TGAGGGTTGA TATAGAGGAG CTTTACAGTT TGTGGAAGCA AAGGGTCCAA GAGAGGAGAC
CCTTTCAGTA TGTGGTTGGG TGTGAGCATT GGAGGGACTT GATATTGAGT GTCCAAGAAG GAGTATTGAT TCCAAGACCT
GAGACACAAC TTGTTGTTGA TATTGTGTCA GATGTGGTGT CAGAGAATGA GGATTTGAGG AGTGGGGTTT GGGCTGATTT
GGGCACTGGA AGTGGTGCCC TTGCTATTAG TATTGGTCGG GTTTTGGGGA ATGAAGGAGG GAGAGTTATT GCCACAGATT
TAAGCCCTGT GGCTGTTGCC GTTGCAACTT ATAATGTGCA GAGGTATTGC TTACAGGACA AAATTGACTT AAGGGAAGGA
TCCTGGTTTG AACCATTGAA AGATATGGAA GGAAAGCTAG CTGGTCTAGT GAGTAACCCA CCTTATATAC CAAGTGAAGA
CATATCTGGT CTACAAGCTG AAGTTGGTAG ACATGAACCG AGATTAGCGT TAGATGGAGG TATTGAAGGA ATGAATGCAC
TTCTGCATCT TTGTGATGGG GCTGCTTTAA TGTTGAAACC TGGTGGATTT TTTGCTTTTG AGACAAATGG CGAGAAGCAG
TGCCGGGCTC TTGTTGATTA CATGAAAAGC AGAAGTGGAA GCTTCTACAA TTTAGAAATA CTTGCTGATT TTGCTGGTAT
TCAAAGATTT GTTATTGGAT TTCACCAATA AGCAATTTTT GAGTTAGATG CATGATTATT TAATTATGTT TTTGGTTGAA
TAGTTCTCCC TTTGTTCTAG TTTCTTTTAA GTCTTCTCAG CTATTTGTTG AGCTATTTGT TGAACACATT GTTTCTGGCA
AAAGTTTAAT TTGTATGCAC CAAACAAAAA CCAACAAATT TATCCTGTGA TATTTGTGAT TTTGATGCAC TGAACATTTT
ATAGGTTATA GGGTAGGTGT CTGAAAGTTG TAGATGTTGT TTAGTGAAAT CATCTAAGAG ATGTTTTTAA TTGTTAGTTT
AGTTATTTAG GTTTCCGTTT TGTACACCTA AGTAAATTGT AACTGTTGTG TAGTTCTTCA CAAGGTTGAA TGTTGTTTAT
ATACTAAATA TATGAAGTGT ATTGAAACTG ATACAAATTA TAATATATTG TTCTTCCC

>Vigan.07G207500.01
ATGAAGCTAA CATTAGGCAT TGCATATTGT CCTCATAGCT TCCCCAAACT CCTCAATTGT TTTTCTTTTG GCTCTCTGGG
TAGACCCTTT TGCTCTTCAG CACCGTCATC TTCCCCGACT TGTGTGAAAC CTCAAGTTCC CCTCTATTTG AGACCACCCA
TTTACTCAAC CAAGTTGTGT GACCTCAAGA AATGGCACGA TTGGGCCAAA GGTCTTTCCT TTTCAATTGG GTCGACTTTT
GTGCAGTCAG ATAATGGACC GGACTCAAGC ATGCTCTGCA GGGAGCTCAA GTGGTTCATG GAGGATGCTG TTGAAGACCG
CTCACTAGCT ACGGAGGATG ATGAAGAGGT GACAATGAGG GTTGATATAG AGGAGCTTTA CAGTTTGTGG AAGCAAAGGG
TCCAAGAGAG GAGACCCTTT CAGTATGTGG TTGGGTGTGA GCATTGGAGG GACTTGATAT TGAGTGTCCA AGAAGGAGTA
TTGATTCCAA GACCTGAGAC ACAACTTGTT GTTGATATTG TGTCAGATGT GGTGTCAGAG AATGAGGATT TGAGGAGTGG
GGTTTGGGCT GATTTGGGCA CTGGAAGTGG TGCCCTTGCT ATTAGTATTG GTCGGGTTTT GGGGAATGAA GGAGGGAGAG
TTATTGCCAC AGATTTAAGC CCTGTGGCTG TTGCCGTTGC AACTTATAAT GTGCAGAGGT ATTGCTTACA GGACAAAATT
GACTTAAGGG AAGGATCCTG GTTTGAACCA TTGAAAGATA TGGAAGGAAA GCTAGCTGGT CTAGTGAGTA ACCCACCTTA
TATACCAAGT GAAGACATAT CTGGTCTACA AGCTGAAGTT GGTAGACATG AACCGAGATT AGCGTTAGAT GGAGGTATTG
AAGGAATGAA TGCACTTCTG CATCTTTGTG ATGGGGCTGC TTTAATGTTG AAACCTGGTG GATTTTTTGC TTTTGAGACA
AATGGCGAGA AGCAGTGCCG GGCTCTTGTT GATTACATGA AAAGCAGAAG TGGAAGCTTC TACAATTTAG AAATACTTGC
TGATTTTGCT GGTATTCAAA GATTTGTTAT TGGATTTCAC CAATAA

>Vigan.07G207500.01
MKLTLGIAYC PHSFPKLLNC FSFGSLGRPF CSSAPSSSPT CVKPQVPLYL RPPIYSTKLC DLKKWHDWAK GLSFSIGSTF
VQSDNGPDSS MLCRELKWFM EDAVEDRSLA TEDDEEVTMR VDIEELYSLW KQRVQERRPF QYVVGCEHWR DLILSVQEGV
LIPRPETQLV VDIVSDVVSE NEDLRSGVWA DLGTGSGALA ISIGRVLGNE GGRVIATDLS PVAVAVATYN VQRYCLQDKI
DLREGSWFEP LKDMEGKLAG LVSNPPYIPS EDISGLQAEV GRHEPRLALD GGIEGMNALL HLCDGAALML KPGGFFAFET
NGEKQCRALV DYMKSRSGSF YNLEILADFA GIQRFVIGFH Q*