GBrowse Details

Vigan.07G211900.01

Basic Information:
Name: Vigan.07G211900.01
Multiple alignment
Variant Information
Position: Chr07:29316111..29319713 (+ strand)
Length: 3603
Functional Information:
Description: Similar to Uncharacterized protein. [I1M2U5, Glycine max]
GO: Molecular Function: methyltransferase activity (GO:0008168)
Molecular Function: O-methyltransferase activity (GO:0008171)
Molecular Function: protein dimerization activity (GO:0046983)
InterPro: O-methyltransferase, family 2 (IPR001077)
Winged helix-turn-helix DNA-binding domain (IPR011991)
Plant methyltransferase dimerisation (IPR012967)
Caffeate O-methyltransferase (COMT) family (IPR016461)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.36,7.89,20.54,5.62,98.65,11.29,14.27,8.06
Arabidopsis thaliana homolog: AT3G53140.1
Automatic updates:
Name: NM_001360031 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max nicotinate N-methyltransferase-like protein (LOC100784957), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr07:29316111..29316470 (+ strand)
Length: 360
Type: five_prime_UTR
Position: Chr07:29316471..29316827 (+ strand)
Length: 357
Type: CDS
Position: Chr07:29317006..29317342 (+ strand)
Length: 337
Type: CDS
Position: Chr07:29317418..29317482 (+ strand)
Length: 65
Type: CDS
Position: Chr07:29319038..29319337 (+ strand)
Length: 300
Type: CDS
Position: Chr07:29319338..29319713 (+ strand)
Length: 376
Type: three_prime_UTR


>Vigan.07G211900.01
TATTCTGATT CATCCTATAC TGCACCCCTA GATCACATTC GTATTATCTA AAACATACTG CTTACATTTC TTCCTTAATC
AATGCCAATT AGCATCCAAG AATTACTAAT AATAAAATTA TTGTGTTAAT TTCGCTTAGC ACCGTCTCAA ACTAGTTTAA
CGGTAAAAAA ATTGAAGTGA TGACACAGCA TATACTAAAT TATTTGCATC ACCGTCCTTC CAGAGTCACG TGTTTTTACC
CTTTTTCCGT TTCACTCTCA CCGGGTTAGG TAACATCCAT TCACCTATAA ATCCCTTCCA CATCACTTCC TCTTCTCACA
AACTCCAAAA CTCTGCAACA ACATCATCAA GAAGAAAAAG ATGGAAGAGG AAGGCACGGA TTCTCGAAAG CAAGCGAGGC
TCGCAATCAT GGAACTGGCC AACATGATAA GCGTTCCGAT GGCCCTAAAC GCCGTCGTTC GCCTCAACGT CGCCGACGCC
ATCTGGAACT CCGGCGCCAA CATCCCCATC TCCGCCGCCC AGATCCTCCC CCGCATCCTC CCCGCCGGCG ACGCCGAGAA
CCTCCAGCGA CTCCTCCGCA TCCTCACCAG CTACGGCGTC TTCCACGAGC ACATCGACGC CGGTGAACGC AAGTACTCCC
TCACCGACGT CGGCAAAACG CTTGTCACTG ACGAGCAAGG CCTCTCCTAC GGGGCTTACG TGCTTCAACA CCACCAGGAC
GCGCTGATGC GAGCGTGGAC ATTGGTTCAC GAGGCAGTGG TGGACCCTAC GAAGGAGCCG TTCGAGAGGG CGAACGGAGA
GGGAGCGTAT GGGTATTATC TGAAGCAGGA AGAGATGAAC GAGTTGATGG TGAAGGCCAT GTCAGGGGTG TCAGTGCCCT
TCATGAAGGC CATGTTAGAG GGCTACGATG GCTTCCAAGG TGTGGAGAAG CTGGTGGACG TGGGTGGTAG TGGCGGTGAC
TGCCTGCGCA TGATCCTGCA GAAACACCCC ACCATCAAGG AGGGGATCAA CTTCGACCTC CCTGAAGTTG TGGCCAAAGC
ACCACCAACC CCATATGTAA CCCATGTGGG TGGTGACATG TTCAAATCTA TTCCCCAAGG AGACGCTATC TTCATGAAGT
GGGTGCTAAC AACATGGACG GACGAGGAAA TAAAGGAGAT AATGCGGAAC TGTCACAAGG CACTTCCTGA GGGAGGGAAA
GTGATAGCTT GTGAGCCAGT GCTGCCAGAG CACTCAGATG AGAGTCACAG AACAAGGGCG TTGCTTGAGG GTGACATTTT
TGTGATGACA ATCTACAGAG CCAAGGGGAA GCACAGGACT GAAGAACAGT TCAGGCAGTT AGCCATTGAT GCAGGTTTCC
CTCTTTTCAG AGCCATCAAT GTTGACCATT TTTACACTGT TCTTGAGTTT CAGAAATGAA ATTAATGCAA CCATTCTTCT
CTGTTTCAAG GGCATTGTTC TGTAGACAGA GTTAAGTGGT AGTGGTTTAG GTTTTATGAT ATTAGAACTG AGCTGCTTGG
AGGATCAGGG CAAAGATTGT TAGATATTGA TTCTGGTATA ATGGAAAAAA AGTGCAGAAT AGTACCATTT GTCACAAGTA
ATAAGAAACA GAGTAACGAC AGAGTAGTAC CCCCTGTAGC CTAAAGTTAA ATAACTATCT TTTCAAAAGT TATCCTTTTA
TTTAAGTTAA TTTGTTATTC CTAAAAGTTC AGACAAATTT TTAGATTATT ATCAGTAAAT TTAATTTTAA GACTCGAAAT
GTATTTAAAA GTGTGCATTG TCTTATAATA GTGAA

>Vigan.07G211900.01
ATGGAAGAGG AAGGCACGGA TTCTCGAAAG CAAGCGAGGC TCGCAATCAT GGAACTGGCC AACATGATAA GCGTTCCGAT
GGCCCTAAAC GCCGTCGTTC GCCTCAACGT CGCCGACGCC ATCTGGAACT CCGGCGCCAA CATCCCCATC TCCGCCGCCC
AGATCCTCCC CCGCATCCTC CCCGCCGGCG ACGCCGAGAA CCTCCAGCGA CTCCTCCGCA TCCTCACCAG CTACGGCGTC
TTCCACGAGC ACATCGACGC CGGTGAACGC AAGTACTCCC TCACCGACGT CGGCAAAACG CTTGTCACTG ACGAGCAAGG
CCTCTCCTAC GGGGCTTACG TGCTTCAACA CCACCAGGAC GCGCTGATGC GAGCGTGGAC ATTGGTTCAC GAGGCAGTGG
TGGACCCTAC GAAGGAGCCG TTCGAGAGGG CGAACGGAGA GGGAGCGTAT GGGTATTATC TGAAGCAGGA AGAGATGAAC
GAGTTGATGG TGAAGGCCAT GTCAGGGGTG TCAGTGCCCT TCATGAAGGC CATGTTAGAG GGCTACGATG GCTTCCAAGG
TGTGGAGAAG CTGGTGGACG TGGGTGGTAG TGGCGGTGAC TGCCTGCGCA TGATCCTGCA GAAACACCCC ACCATCAAGG
AGGGGATCAA CTTCGACCTC CCTGAAGTTG TGGCCAAAGC ACCACCAACC CCATATGTAA CCCATGTGGG TGGTGACATG
TTCAAATCTA TTCCCCAAGG AGACGCTATC TTCATGAAGT GGGTGCTAAC AACATGGACG GACGAGGAAA TAAAGGAGAT
AATGCGGAAC TGTCACAAGG CACTTCCTGA GGGAGGGAAA GTGATAGCTT GTGAGCCAGT GCTGCCAGAG CACTCAGATG
AGAGTCACAG AACAAGGGCG TTGCTTGAGG GTGACATTTT TGTGATGACA ATCTACAGAG CCAAGGGGAA GCACAGGACT
GAAGAACAGT TCAGGCAGTT AGCCATTGAT GCAGGTTTCC CTCTTTTCAG AGCCATCAAT GTTGACCATT TTTACACTGT
TCTTGAGTTT CAGAAATGA

>Vigan.07G211900.01
MEEEGTDSRK QARLAIMELA NMISVPMALN AVVRLNVADA IWNSGANIPI SAAQILPRIL PAGDAENLQR LLRILTSYGV
FHEHIDAGER KYSLTDVGKT LVTDEQGLSY GAYVLQHHQD ALMRAWTLVH EAVVDPTKEP FERANGEGAY GYYLKQEEMN
ELMVKAMSGV SVPFMKAMLE GYDGFQGVEK LVDVGGSGGD CLRMILQKHP TIKEGINFDL PEVVAKAPPT PYVTHVGGDM
FKSIPQGDAI FMKWVLTTWT DEEIKEIMRN CHKALPEGGK VIACEPVLPE HSDESHRTRA LLEGDIFVMT IYRAKGKHRT
EEQFRQLAID AGFPLFRAIN VDHFYTVLEF QK*