GBrowse Details

Vigan.07G220800.01

Basic Information:
Name: Vigan.07G220800.01
Multiple alignment
Variant Information
Position: Chr07:30079179..30081670 (+ strand)
Length: 2492
Functional Information:
Description: Similar to Uncharacterized protein. [C6TAT2, Glycine max]
GO: Molecular Function: protein binding (GO:0005515)
InterPro: Glutathione S-transferase, N-terminal (IPR004045)
Glutathione S-transferase, C-terminal (IPR004046)
Glutathione S-transferase, C-terminal-like (IPR010987)
Thioredoxin-like fold (IPR012336)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.00,0.10,0.09,0.00,122.28,0.36,26.17,0.24
Automatic updates:
Name: KM818453 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max tau class glutathione S-transferase (GSTU38) mRNA, complete cds.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr07:30079179..30079271 (+ strand)
Length: 93
Type: five_prime_UTR
Position: Chr07:30079272..30079583 (+ strand)
Length: 312
Type: CDS
Position: Chr07:30081141..30081482 (+ strand)
Length: 342
Type: CDS
Position: Chr07:30081483..30081670 (+ strand)
Length: 188
Type: three_prime_UTR


>Vigan.07G220800.01
GCAGAATTTT GACTGTAGGG CTATAAAAGA ACAACCTTTG CTCCTGTAAC CAACAGCAAA CAGCATAGTT CTTGCAGTTG
AGAAGTTGAA TCGATGGACG AGGTGGTTCT GTTGGATACA TGGGGAAGCA TGTTTGGGAT GAGGGCTTGG ATTGCATTGG
AAGAAAAGGG TGTTAAGTAT GAACGCAAGG AAGAGGATCT GAGCAAGAAG AGCCCTTTGC TTCTGCAGAT GAACCCTATT
CACAAGAAAA TTCCAGTTCT CATTCATAAT GGAAAACCCA TTTCTGAATC TGCAATAATA GTGCAGTACA TCGATGAGGT
CTGGAATCAC AACCCTCCAT TTATGCCCTC TGATCCTTAT GAGAGAGCTC AAGCCAGATT CTGGGTCGAT TACATTGATG
CAAAGGTGTA TCCTACTTGG AATAAAATGT GGCTTTCTGA AGGAGAAGAA CACGAGGCAG GAAAAAAAGA GTTGATTTCT
ATCTTTAAGC AGCTGGAAGA GACATTGGGT GACAAACCTT TTTATGGAAA TGAGATGTTT GGCTTTGTTG ATATTGCTCT
TATCCCTTTC TACAGTTGGT TTTATACTTT TGAGACATAT GGAAACTTTG AAATGGAAGC AGAGTGTCCT AAACTTGTGG
CTTGGGCTAA AAGATGCATG CAGAGAGAGA CTGTGTCCAC GATTCTTCCT AATGAGAAGG AAGTTTACAA TGCAGTAGTG
GAAATGAAGA AGAATATAGA AACTTAATGT GTACCTTTAT GGTATTATTG TATGCCTTTG TTTTGAGTTT GTTTAGCTTG
TTTTTGAGTG TTTTACATAA GATTGATTAA GTTGAGATAT ATATAGAGGA ATTAAGGTGA GGCGTATATG AATGTTGTTA
TATTTTGTTT TAAATTTGTG CAATTATATT ATCAATAAAA TCTCATTTAT TATGG

>Vigan.07G220800.01
ATGGACGAGG TGGTTCTGTT GGATACATGG GGAAGCATGT TTGGGATGAG GGCTTGGATT GCATTGGAAG AAAAGGGTGT
TAAGTATGAA CGCAAGGAAG AGGATCTGAG CAAGAAGAGC CCTTTGCTTC TGCAGATGAA CCCTATTCAC AAGAAAATTC
CAGTTCTCAT TCATAATGGA AAACCCATTT CTGAATCTGC AATAATAGTG CAGTACATCG ATGAGGTCTG GAATCACAAC
CCTCCATTTA TGCCCTCTGA TCCTTATGAG AGAGCTCAAG CCAGATTCTG GGTCGATTAC ATTGATGCAA AGGTGTATCC
TACTTGGAAT AAAATGTGGC TTTCTGAAGG AGAAGAACAC GAGGCAGGAA AAAAAGAGTT GATTTCTATC TTTAAGCAGC
TGGAAGAGAC ATTGGGTGAC AAACCTTTTT ATGGAAATGA GATGTTTGGC TTTGTTGATA TTGCTCTTAT CCCTTTCTAC
AGTTGGTTTT ATACTTTTGA GACATATGGA AACTTTGAAA TGGAAGCAGA GTGTCCTAAA CTTGTGGCTT GGGCTAAAAG
ATGCATGCAG AGAGAGACTG TGTCCACGAT TCTTCCTAAT GAGAAGGAAG TTTACAATGC AGTAGTGGAA ATGAAGAAGA
ATATAGAAAC TTAA

>Vigan.07G220800.01
MDEVVLLDTW GSMFGMRAWI ALEEKGVKYE RKEEDLSKKS PLLLQMNPIH KKIPVLIHNG KPISESAIIV QYIDEVWNHN
PPFMPSDPYE RAQARFWVDY IDAKVYPTWN KMWLSEGEEH EAGKKELISI FKQLEETLGD KPFYGNEMFG FVDIALIPFY
SWFYTFETYG NFEMEAECPK LVAWAKRCMQ RETVSTILPN EKEVYNAVVE MKKNIET*